Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:15:22 (1452025): wrapper (7.7.26015): starting
03:15:22 (1452025): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 03:15:22] Arguments: --nthreads 4
[2025-06-04 03:15:22] Threads: 4
[2025-06-04 03:15:22] Checking for CVMFS
[2025-06-04 03:15:22] No cvmfs_config command found, will try listing directly
[2025-06-04 03:15:22] CVMFS is ok
[2025-06-04 03:15:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:15:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:15:22] Further information can be found at the LHC@home message board.
[2025-06-04 03:15:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:15:22] Checking for apptainer binary...
[2025-06-04 03:15:22] which: no apptainer in ((null))
[2025-06-04 03:15:22] apptainer is not installed, using version from CVMFS
[2025-06-04 03:15:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:15:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-04 03:15:22] apptainer works
[2025-06-04 03:15:22] Set ATHENA_PROC_NUMBER=4
[2025-06-04 03:15:22] Set ATHENA_CORE_NUMBER=4
[2025-06-04 03:15:22] Starting ATLAS job with PandaID=6677378323
[2025-06-04 03:15:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:05:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:05:37] 2025-06-04 04:51:20,283 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:05:37] 2025-06-04 04:51:21,328 | INFO     | monitor loop #944: job 0:6677378323 is in state 'finished'
[2025-06-04 07:05:37] 2025-06-04 04:51:21,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:05:37] 2025-06-04 04:51:23,831 | INFO     | monitor loop #945: job 0:6677378323 is in state 'finished'
[2025-06-04 07:05:37] 2025-06-04 04:51:23,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,045 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:05:37] 2025-06-04 04:51:24,046 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677378323/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,046 | INFO     | extracted standard info from prmon json
[2025-06-04 07:05:37] 2025-06-04 04:51:24,047 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:05:37] 2025-06-04 04:51:24,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:05:37] 2025-06-04 04:51:24,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:05:37] 2025-06-04 04:51:24,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:05:37] 2025-06-04 04:51:24,052 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:05:37] 2025-06-04 04:51:24,053 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,054 | INFO     | sum of deviations: -10479072788.499994
[2025-06-04 07:05:37] 2025-06-04 04:51:24,054 | INFO     | mean x: 1749006194.5
[2025-06-04 07:05:37] 2025-06-04 04:51:24,054 | INFO     | mean y: 2343942.0613207547
[2025-06-04 07:05:37] 2025-06-04 04:51:24,055 | INFO     | -- intersect: 6205859289.51983
[2025-06-04 07:05:37] 2025-06-04 04:51:24,055 | INFO     | intersect: 6205859289.51983
[2025-06-04 07:05:37] 2025-06-04 04:51:24,055 | INFO     | chi2: 1.7426442768078358
[2025-06-04 07:05:37] 2025-06-04 04:51:24,056 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,057 | INFO     | sum of deviations: -10221550521.999998
[2025-06-04 07:05:37] 2025-06-04 04:51:24,057 | INFO     | mean x: 1749006042.0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,057 | INFO     | mean y: 2344133.685990338
[2025-06-04 07:05:37] 2025-06-04 04:51:24,057 | INFO     | -- intersect: 6502574745.136702
[2025-06-04 07:05:37] 2025-06-04 04:51:24,058 | INFO     | intersect: 6502574745.136702
[2025-06-04 07:05:37] 2025-06-04 04:51:24,058 | INFO     | chi2: 1.7414150738243737
[2025-06-04 07:05:37] 2025-06-04 04:51:24,058 | INFO     | current chi2=1.7414150738243737 (change=0.07053665511780931 %)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,058 | INFO     | right removable region: 206
[2025-06-04 07:05:37] 2025-06-04 04:51:24,059 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,060 | INFO     | sum of deviations: -41072622541.00001
[2025-06-04 07:05:37] 2025-06-04 04:51:24,060 | INFO     | mean x: 1749006347.0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,060 | INFO     | mean y: 2366546.3671497586
[2025-06-04 07:05:37] 2025-06-04 04:51:24,061 | INFO     | -- intersect: 26121844634.984768
[2025-06-04 07:05:37] 2025-06-04 04:51:24,061 | INFO     | intersect: 26121844634.984768
[2025-06-04 07:05:37] 2025-06-04 04:51:24,061 | INFO     | chi2: 0.22802114630571724
[2025-06-04 07:05:37] 2025-06-04 04:51:24,061 | INFO     | current chi2=0.22802114630571724 (change=86.91522134836349 %)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,062 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 07:05:37] 2025-06-04 04:51:24,064 | INFO     | sum of deviations: -33165564244.499996
[2025-06-04 07:05:37] 2025-06-04 04:51:24,064 | INFO     | mean x: 1749006499.5
[2025-06-04 07:05:37] 2025-06-04 04:51:24,064 | INFO     | mean y: 2360331.707920792
[2025-06-04 07:05:37] 2025-06-04 04:51:24,064 | INFO     | -- intersect: 22698757619.971348
[2025-06-04 07:05:37] 2025-06-04 04:51:24,064 | INFO     | intersect: 22698757619.971348
[2025-06-04 07:05:37] 2025-06-04 04:51:24,065 | INFO     | chi2: 0.20249705226574033
[2025-06-04 07:05:37] 2025-06-04 04:51:24,065 | INFO     | current chi2=0.20249705226574033 (change=11.193739902419276 %)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,065 | INFO     | left removable region: 20
[2025-06-04 07:05:37] 2025-06-04 04:51:24,065 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 07:05:37] 2025-06-04 04:51:24,067 | INFO     | sum of deviations: -12943627271.0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,067 | INFO     | mean x: 1749006621.5
[2025-06-04 07:05:37] 2025-06-04 04:51:24,067 | INFO     | mean y: 2343751.365591398
[2025-06-04 07:05:37] 2025-06-04 04:51:24,067 | INFO     | -- intersect: 11348342958.757578
[2025-06-04 07:05:37] 2025-06-04 04:51:24,067 | INFO     | intersect: 11348342958.757578
[2025-06-04 07:05:37] 2025-06-04 04:51:24,067 | INFO     | chi2: 0.06854663699214825
[2025-06-04 07:05:37] 2025-06-04 04:51:24,068 | INFO     | -- intersect: 11348342958.757578
[2025-06-04 07:05:37] 2025-06-04 04:51:24,068 | INFO     | current memory leak: -6.49 B/s (using 186 data points, chi2=0.07)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,068 | INFO     | ..............................
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . Timing measurements:
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . get job = 0 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . initial setup = 1 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . payload setup = 7 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . stage-in = 0 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . payload execution = 12917 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . stage-out = 1 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,069 | INFO     | . log creation = 0 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,070 | INFO     | ..............................
[2025-06-04 07:05:37] 2025-06-04 04:51:24,183 | INFO     | 
[2025-06-04 07:05:37] 2025-06-04 04:51:24,183 | INFO     | job summary report
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | --------------------------------------------------
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | PanDA job id: 6677378323
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | task id: 45006595
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | errors: (none)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | pilot state: finished 
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | transexitcode: 0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,184 | INFO     | exeerrorcode: 0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | exeerrordiag: 
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | exitcode: 0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | exitmsg: OK
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | cpuconsumptiontime: 49235 s
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | nevents: 400
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | neventsw: 0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | pid: 1464769
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | pgrp: 1464769
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | corecount: 4
[2025-06-04 07:05:37] 2025-06-04 04:51:24,185 | INFO     | event service: False
[2025-06-04 07:05:37] 2025-06-04 04:51:24,186 | INFO     | sizes: {0: 2405016, 1: 2405215, 5: 2405421, 12: 2405477, 12928: 2435120, 12931: 2444083, 12932: 2444267, 12936: 2444437}
[2025-06-04 07:05:37] 2025-06-04 04:51:24,186 | INFO     | --------------------------------------------------
[2025-06-04 07:05:37] 2025-06-04 04:51:24,186 | INFO     | 
[2025-06-04 07:05:37] 2025-06-04 04:51:24,186 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-04 07:05:37] 2025-06-04 04:51:24,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | job 6677378323 has completed (purged errors)
[2025-06-04 07:05:37] 2025-06-04 04:51:24,208 | INFO     | overall cleanup function is called
[2025-06-04 07:05:37] 2025-06-04 04:51:25,216 | INFO     | --- collectZombieJob: --- 10, [1464769]
[2025-06-04 07:05:37] 2025-06-04 04:51:25,217 | INFO     | zombie collector waiting for pid 1464769
[2025-06-04 07:05:37] 2025-06-04 04:51:25,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:05:37] 2025-06-04 04:51:25,217 | INFO     | collected zombie processes
[2025-06-04 07:05:37] 2025-06-04 04:51:25,217 | INFO     | will attempt to kill all subprocesses of pid=1464769
[2025-06-04 07:05:37] 2025-06-04 04:51:25,490 | INFO     | process IDs to be killed: [1464769] (in reverse order)
[2025-06-04 07:05:37] 2025-06-04 04:51:25,567 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:05:37] 2025-06-04 04:51:25,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:05:37] 2025-06-04 04:51:25,575 | INFO     | did not find any defunct processes belonging to 1464769
[2025-06-04 07:05:37] 2025-06-04 04:51:25,582 | INFO     | did not find any defunct processes belonging to 1464769
[2025-06-04 07:05:37] 2025-06-04 04:51:25,582 | INFO     | ready for new job
[2025-06-04 07:05:37] 2025-06-04 04:51:25,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:05:37] 2025-06-04 04:51:25,584 | INFO     | **************************************
[2025-06-04 07:05:37] 2025-06-04 04:51:25,584 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:05:37] 2025-06-04 04:51:25,585 | INFO     | **************************************
[2025-06-04 07:05:37] 2025-06-04 04:51:25,585 | INFO     | 
[2025-06-04 07:05:37] 2025-06-04 04:51:25,587 | INFO     | architecture information:
[2025-06-04 07:05:37] 2025-06-04 04:51:25,587 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:05:37] 2025-06-04 04:51:25,601 | INFO     | cat /etc/os-release:
[2025-06-04 07:05:37] NAME="CentOS Linux"
[2025-06-04 07:05:37] VERSION="7 (Core)"
[2025-06-04 07:05:37] ID="centos"
[2025-06-04 07:05:37] ID_LIKE="rhel fedora"
[2025-06-04 07:05:37] VERSION_ID="7"
[2025-06-04 07:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:05:37] ANSI_COLOR="0;31"
[2025-06-04 07:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:05:37] HOME_URL="https://www.centos.org/"
[2025-06-04 07:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:05:37] 
[2025-06-04 07:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:05:37] 
[2025-06-04 07:05:37] 2025-06-04 04:51:25,602 | INFO     | **************************************
[2025-06-04 07:05:37] 2025-06-04 04:51:26,105 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-04 07:05:37] 2025-06-04 04:51:26,119 | INFO     | sufficient remaining disk space (1649263247360 B)
[2025-06-04 07:05:37] 2025-06-04 04:51:26,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:05:37] 2025-06-04 04:51:26,120 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:05:37] 2025-06-04 04:51:26,120 | INFO     | update_server=False
[2025-06-04 07:05:37] 2025-06-04 04:51:26,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:05:37] 2025-06-04 04:51:26,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:05:37] 2025-06-04 04:51:26,121 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:05:37] 2025-06-04 04:51:26,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:05:37] 2025-06-04 04:51:26,121 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:05:37] 2025-06-04 04:51:26,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:05:37] 2025-06-04 04:51:26,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:05:37] 2025-06-04 04:51:26,334 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:05:37] 2025-06-04 04:51:26,335 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:05:37] 2025-06-04 04:51:26,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:05:37] 2025-06-04 04:51:26,335 | INFO     | will abort loop
[2025-06-04 07:05:37] 2025-06-04 04:51:26,416 | INFO     | all payload control threads have been joined
[2025-06-04 07:05:37] 2025-06-04 04:51:26,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:05:37] 2025-06-04 04:51:26,746 | INFO     | all data control threads have been joined
[2025-06-04 07:05:37] 2025-06-04 04:51:26,850 | INFO     | all job control threads have been joined
[2025-06-04 07:05:37] 2025-06-04 04:51:27,125 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,127 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,160 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,258 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,340 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,422 | INFO     | [payload] control thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,751 | INFO     | [data] control thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,856 | INFO     | [job] control thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:27,900 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:28,140 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:28,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:28,375 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:28,391 | INFO     | [job] validate thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:28,485 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:28,692 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:30,126 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:05:37] 2025-06-04 04:51:30,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22979913750336)>', '<ExcThread(monitor, started 22979601725184)>']
[2025-06-04 07:05:37] 2025-06-04 04:51:31,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:05:37] 2025-06-04 04:51:31,144 | INFO     | [monitor] control thread has ended
[2025-06-04 07:05:37] 2025-06-04 04:51:35,991 | INFO     | all workflow threads have been joined
[2025-06-04 07:05:37] 2025-06-04 04:51:35,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:05:37] 2025-06-04 04:51:35,992 | INFO     | traces error code: 0
[2025-06-04 07:05:37] 2025-06-04 04:51:35,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:05:37] 2025-06-04 04:51:36,120 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:05:37] 2025-06-04 04:51:36,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:05:37] 2025-06-04 04:51:36,124 [wrapper] pilotpid: 1455610
[2025-06-04 07:05:37] 2025-06-04 04:51:36,127 [wrapper] Pilot exit status: 0
[2025-06-04 07:05:37] 2025-06-04 04:51:36,136 [wrapper] pandaids: 6677378323
[2025-06-04 07:05:37] 2025-06-04 04:51:36,189 [wrapper] cleanup supervisor_pilot 1672622 1455611
[2025-06-04 07:05:37] 2025-06-04 04:51:36,192 [wrapper] Test setup, not cleaning
[2025-06-04 07:05:37] 2025-06-04 04:51:36,194 [wrapper] apfmon messages muted
[2025-06-04 07:05:37] 2025-06-04 04:51:36,197 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:05:37] 2025-06-04 04:51:36,199 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:05:37]  *** Error codes and diagnostics ***
[2025-06-04 07:05:37]     "exeErrorCode": 0,
[2025-06-04 07:05:37]     "exeErrorDiag": "",
[2025-06-04 07:05:37]     "pilotErrorCode": 0,
[2025-06-04 07:05:37]     "pilotErrorDiag": "",
[2025-06-04 07:05:37]  *** Listing of results directory ***
[2025-06-04 07:05:37] total 387772
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 07:05:37] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc       100 Jun  4 03:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:05:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 03:15 run_atlas
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc       105 Jun  4 03:15 job.xml
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc      6422 Jun  4 03:15 init_data.xml
[2025-06-04 07:05:37] -rw-r--r-- 2 boinc boinc 214712507 Jun  4 03:15 EVNT.45006593._000042.pool.root.1
[2025-06-04 07:05:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:15 start_atlas.sh
[2025-06-04 07:05:37] drwxrwx--x 2 boinc boinc      4096 Jun  4 03:15 shared
[2025-06-04 07:05:37] -rw-r--r-- 2 boinc boinc    508873 Jun  4 03:15 input.tar.gz
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc         0 Jun  4 03:15 boinc_lockfile
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc      2521 Jun  4 03:15 pandaJob.out
[2025-06-04 07:05:37] -rw------- 1 boinc boinc    986069 Jun  4 03:15 agis_schedconf.cvmfs.json
[2025-06-04 07:05:37] drwx------ 4 boinc boinc      4096 Jun  4 03:15 pilot3
[2025-06-04 07:05:37] -rw------- 1 boinc boinc 175455704 Jun  4 06:50 HITS.45006595._001044.pool.root.1
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc       529 Jun  4 06:50 boinc_task_state.xml
[2025-06-04 07:05:37] -rw------- 1 boinc boinc        95 Jun  4 06:51 pilot_heartbeat.json
[2025-06-04 07:05:37] -rw------- 1 boinc boinc      1036 Jun  4 06:51 memory_monitor_summary.json
[2025-06-04 07:05:37] -rw------- 1 boinc boinc   1603667 Jun  4 06:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:05:37] -rw------- 1 boinc boinc    327615 Jun  4 06:51 log.45006595._001044.job.log.tgz.1
[2025-06-04 07:05:37] -rw------- 1 boinc boinc      7722 Jun  4 06:51 heartbeat.json
[2025-06-04 07:05:37] -rw------- 1 boinc boinc      4673 Jun  4 06:51 pilotlog.txt
[2025-06-04 07:05:37] -rw------- 1 boinc boinc   1211638 Jun  4 06:51 log.45006595._001044.job.log.1
[2025-06-04 07:05:37] -rw------- 1 boinc boinc       357 Jun  4 06:51 output.list
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc       620 Jun  4 06:51 runtime_log
[2025-06-04 07:05:37] -rw------- 1 boinc boinc   1556480 Jun  4 06:51 result.tar.gz
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc      9026 Jun  4 06:51 runtime_log.err
[2025-06-04 07:05:37] -rw------- 1 boinc boinc       666 Jun  4 06:51 OooMDmtaMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLYVKDm2xRjEo.diag
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc        26 Jun  4 07:05 wrapper_checkpoint.txt
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:05 boinc_mmap_file
[2025-06-04 07:05:37] -rw-r--r-- 1 boinc boinc     20985 Jun  4 07:05 stderr.txt
[2025-06-04 07:05:37] HITS file was successfully produced:
[2025-06-04 07:05:37] -rw------- 1 boinc boinc 175455704 Jun  4 06:50 shared/HITS.pool.root.1
[2025-06-04 07:05:37]  *** Contents of shared directory: ***
[2025-06-04 07:05:37] total 383072
[2025-06-04 07:05:37] -rw-r--r-- 2 boinc boinc 214712507 Jun  4 03:15 ATLAS.root_0
[2025-06-04 07:05:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:15 start_atlas.sh
[2025-06-04 07:05:37] -rw-r--r-- 2 boinc boinc    508873 Jun  4 03:15 input.tar.gz
[2025-06-04 07:05:37] -rw------- 1 boinc boinc 175455704 Jun  4 06:50 HITS.pool.root.1
[2025-06-04 07:05:37] -rw------- 1 boinc boinc   1556480 Jun  4 06:51 result.tar.gz
07:05:39 (1452025): run_atlas exited; CPU time 49692.357342
07:05:39 (1452025): called boinc_finish(0)

</stderr_txt>
]]>

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