Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:09:53 (814720): wrapper (7.7.26015): starting
09:09:53 (814720): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 09:09:53] Arguments: --nthreads 3
[2025-06-04 09:09:53] Threads: 3
[2025-06-04 09:09:53] Checking for CVMFS
[2025-06-04 09:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:09:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:09:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:09:54] 2.12.7.0 68668 5710 47768 146771 1 55 5635098 10240000 0 130560 0 1978174 99.982 1309074 1325 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-04 09:09:54] CVMFS is ok
[2025-06-04 09:09:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:09:54] Checking for apptainer binary...
[2025-06-04 09:09:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:09:54] Running /usr/bin/apptainer --version
[2025-06-04 09:09:54] apptainer version 1.3.4
[2025-06-04 09:09:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:09:54] ahanlst03
[2025-06-04 09:09:54] apptainer works
[2025-06-04 09:09:54] Set ATHENA_PROC_NUMBER=3
[2025-06-04 09:09:54] Set ATHENA_CORE_NUMBER=3
[2025-06-04 09:09:54] Starting ATLAS job with PandaID=6677378300
[2025-06-04 09:09:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:59:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:59:36] 2025-06-04 11:59:23,474 | INFO     | sum of deviations: 25494427931.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,474 | INFO     | mean x: 1749029667.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,474 | INFO     | mean y: 2304479.397887324
[2025-06-04 13:59:36] 2025-06-04 11:59:23,475 | INFO     | -- intersect: -6275595438.367726
[2025-06-04 13:59:36] 2025-06-04 11:59:23,475 | INFO     | intersect: -6275595438.367726
[2025-06-04 13:59:36] 2025-06-04 11:59:23,475 | INFO     | chi2: 1.334636464550121
[2025-06-04 13:59:36] 2025-06-04 11:59:23,476 | INFO     | sum of square deviations: 6734191380.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,478 | INFO     | sum of deviations: 24963209583.999996
[2025-06-04 13:59:36] 2025-06-04 11:59:23,478 | INFO     | mean x: 1749029515.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,479 | INFO     | mean y: 2304259.5734767024
[2025-06-04 13:59:36] 2025-06-04 11:59:23,479 | INFO     | -- intersect: -6481234429.454227
[2025-06-04 13:59:36] 2025-06-04 11:59:23,479 | INFO     | intersect: -6481234429.454227
[2025-06-04 13:59:36] 2025-06-04 11:59:23,479 | INFO     | chi2: 1.3350585418990764
[2025-06-04 13:59:36] 2025-06-04 11:59:23,479 | INFO     | current chi2=1.3350585418990764 (change=-0.03162489263304064 %)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,480 | INFO     | right removable region: 278
[2025-06-04 13:59:36] 2025-06-04 11:59:23,480 | INFO     | sum of square deviations: 6734191380.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,483 | INFO     | sum of deviations: -2539068819.000008
[2025-06-04 13:59:36] 2025-06-04 11:59:23,483 | INFO     | mean x: 1749029820.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,483 | INFO     | mean y: 2315922.770609319
[2025-06-04 13:59:36] 2025-06-04 11:59:23,483 | INFO     | -- intersect: 661772541.8165617
[2025-06-04 13:59:36] 2025-06-04 11:59:23,483 | INFO     | intersect: 661772541.8165617
[2025-06-04 13:59:36] 2025-06-04 11:59:23,484 | INFO     | chi2: 0.09646826057219549
[2025-06-04 13:59:36] 2025-06-04 11:59:23,484 | INFO     | current chi2=0.09646826057219549 (change=92.77194478537548 %)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,484 | INFO     | sum of square deviations: 6378584712.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,487 | INFO     | sum of deviations: 8287651662.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,487 | INFO     | mean x: 1749029972.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,487 | INFO     | mean y: 2311297.416058394
[2025-06-04 13:59:36] 2025-06-04 11:59:23,487 | INFO     | -- intersect: -2270191430.3553786
[2025-06-04 13:59:36] 2025-06-04 11:59:23,487 | INFO     | intersect: -2270191430.3553786
[2025-06-04 13:59:36] 2025-06-04 11:59:23,488 | INFO     | chi2: 0.005504702051999105
[2025-06-04 13:59:36] 2025-06-04 11:59:23,488 | INFO     | current chi2=0.005504702051999105 (change=94.2937687283379 %)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,488 | INFO     | sum of square deviations: 6035722470.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,491 | INFO     | sum of deviations: 6246552500.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,491 | INFO     | mean x: 1749030125.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,491 | INFO     | mean y: 2312204.6096654274
[2025-06-04 13:59:36] 2025-06-04 11:59:23,491 | INFO     | -- intersect: -1807812192.9579487
[2025-06-04 13:59:36] 2025-06-04 11:59:23,491 | INFO     | intersect: -1807812192.9579487
[2025-06-04 13:59:36] 2025-06-04 11:59:23,492 | INFO     | chi2: 0.004007557093548945
[2025-06-04 13:59:36] 2025-06-04 11:59:23,492 | INFO     | current chi2=0.004007557093548945 (change=27.197565723043127 %)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,492 | INFO     | sum of square deviations: 5705372090.0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,495 | INFO     | sum of deviations: 4804173248.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,495 | INFO     | mean x: 1749030277.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,495 | INFO     | mean y: 2312869.875
[2025-06-04 13:59:36] 2025-06-04 11:59:23,495 | INFO     | -- intersect: -1470447247.6832628
[2025-06-04 13:59:36] 2025-06-04 11:59:23,495 | INFO     | intersect: -1470447247.6832628
[2025-06-04 13:59:36] 2025-06-04 11:59:23,496 | INFO     | chi2: 0.0032636121230279445
[2025-06-04 13:59:36] 2025-06-04 11:59:23,496 | INFO     | current chi2=0.0032636121230279445 (change=18.56355263705526 %)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,496 | INFO     | left removable region: 40
[2025-06-04 13:59:36] 2025-06-04 11:59:23,496 | INFO     | sum of square deviations: 4180243959.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,498 | INFO     | sum of deviations: 1679868721.5000002
[2025-06-04 13:59:36] 2025-06-04 11:59:23,499 | INFO     | mean x: 1749030704.5
[2025-06-04 13:59:36] 2025-06-04 11:59:23,499 | INFO     | mean y: 2314335.93697479
[2025-06-04 13:59:36] 2025-06-04 11:59:23,499 | INFO     | -- intersect: -700549420.795561
[2025-06-04 13:59:36] 2025-06-04 11:59:23,499 | INFO     | intersect: -700549420.795561
[2025-06-04 13:59:36] 2025-06-04 11:59:23,499 | INFO     | chi2: 0.0024453944034632208
[2025-06-04 13:59:36] 2025-06-04 11:59:23,500 | INFO     | -- intersect: -700549420.795561
[2025-06-04 13:59:36] 2025-06-04 11:59:23,500 | INFO     | current memory leak: 0.40 B/s (using 238 data points, chi2=0.00)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,500 | INFO     | ..............................
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . Timing measurements:
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . get job = 0 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . initial setup = 2 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . payload setup = 7 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . stage-in = 0 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . payload execution = 17310 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . stage-out = 6 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | . log creation = 0 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,501 | INFO     | ..............................
[2025-06-04 13:59:36] 2025-06-04 11:59:23,705 | INFO     | 
[2025-06-04 13:59:36] 2025-06-04 11:59:23,706 | INFO     | job summary report
[2025-06-04 13:59:36] 2025-06-04 11:59:23,706 | INFO     | --------------------------------------------------
[2025-06-04 13:59:36] 2025-06-04 11:59:23,706 | INFO     | PanDA job id: 6677378300
[2025-06-04 13:59:36] 2025-06-04 11:59:23,706 | INFO     | task id: 45006595
[2025-06-04 13:59:36] 2025-06-04 11:59:23,706 | INFO     | errors: (none)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | pilot state: finished 
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | transexitcode: 0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | exeerrorcode: 0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | exeerrordiag: 
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | exitcode: 0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | exitmsg: OK
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | cpuconsumptiontime: 50984 s
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | nevents: 400
[2025-06-04 13:59:36] 2025-06-04 11:59:23,707 | INFO     | neventsw: 0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | pid: 824724
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | pgrp: 824724
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | corecount: 3
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | event service: False
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | sizes: {0: 2405012, 1: 2405211, 5: 2405417, 12: 2405473, 17322: 2437267, 17323: 2437266, 17329: 2447458, 17332: 2447514, 17341: 2447684}
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | --------------------------------------------------
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | 
[2025-06-04 13:59:36] 2025-06-04 11:59:23,708 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 13:59:36] 2025-06-04 11:59:23,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:59:36] 2025-06-04 11:59:23,735 | INFO     | job 6677378300 has completed (purged errors)
[2025-06-04 13:59:36] 2025-06-04 11:59:23,735 | INFO     | overall cleanup function is called
[2025-06-04 13:59:36] 2025-06-04 11:59:24,743 | INFO     | --- collectZombieJob: --- 10, [824724]
[2025-06-04 13:59:36] 2025-06-04 11:59:24,743 | INFO     | zombie collector waiting for pid 824724
[2025-06-04 13:59:36] 2025-06-04 11:59:24,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:59:36] 2025-06-04 11:59:24,744 | INFO     | collected zombie processes
[2025-06-04 13:59:36] 2025-06-04 11:59:24,744 | INFO     | will attempt to kill all subprocesses of pid=824724
[2025-06-04 13:59:36] 2025-06-04 11:59:24,862 | INFO     | process IDs to be killed: [824724] (in reverse order)
[2025-06-04 13:59:36] 2025-06-04 11:59:24,920 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:59:36] 2025-06-04 11:59:24,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:59:36] 2025-06-04 11:59:24,925 | INFO     | did not find any defunct processes belonging to 824724
[2025-06-04 13:59:36] 2025-06-04 11:59:24,929 | INFO     | did not find any defunct processes belonging to 824724
[2025-06-04 13:59:36] 2025-06-04 11:59:24,930 | INFO     | ready for new job
[2025-06-04 13:59:36] 2025-06-04 11:59:24,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:59:36] 2025-06-04 11:59:24,933 | INFO     | **************************************
[2025-06-04 13:59:36] 2025-06-04 11:59:24,933 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:59:36] 2025-06-04 11:59:24,933 | INFO     | **************************************
[2025-06-04 13:59:36] 2025-06-04 11:59:24,933 | INFO     | 
[2025-06-04 13:59:36] 2025-06-04 11:59:24,934 | INFO     | architecture information:
[2025-06-04 13:59:36] 2025-06-04 11:59:24,935 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:59:36] 2025-06-04 11:59:24,956 | INFO     | cat /etc/os-release:
[2025-06-04 13:59:36] NAME="CentOS Linux"
[2025-06-04 13:59:36] VERSION="7 (Core)"
[2025-06-04 13:59:36] ID="centos"
[2025-06-04 13:59:36] ID_LIKE="rhel fedora"
[2025-06-04 13:59:36] VERSION_ID="7"
[2025-06-04 13:59:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:59:36] ANSI_COLOR="0;31"
[2025-06-04 13:59:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:59:36] HOME_URL="https://www.centos.org/"
[2025-06-04 13:59:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:59:36] 
[2025-06-04 13:59:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:59:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:59:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:59:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:59:36] 
[2025-06-04 13:59:36] 2025-06-04 11:59:24,957 | INFO     | **************************************
[2025-06-04 13:59:36] 2025-06-04 11:59:25,460 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 13:59:36] 2025-06-04 11:59:25,483 | INFO     | sufficient remaining disk space (33838596096 B)
[2025-06-04 13:59:36] 2025-06-04 11:59:25,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:59:36] 2025-06-04 11:59:25,484 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:59:36] 2025-06-04 11:59:25,484 | INFO     | update_server=False
[2025-06-04 13:59:36] 2025-06-04 11:59:25,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:59:36] 2025-06-04 11:59:25,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:59:36] 2025-06-04 11:59:25,485 | INFO     | aborting loop
[2025-06-04 13:59:36] 2025-06-04 11:59:25,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:59:36] 2025-06-04 11:59:25,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:59:36] 2025-06-04 11:59:25,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:59:36] 2025-06-04 11:59:25,565 | INFO     | all job control threads have been joined
[2025-06-04 13:59:36] 2025-06-04 11:59:25,588 | INFO     | PID=818306 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:59:36] 2025-06-04 11:59:25,588 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:59:36] 2025-06-04 11:59:25,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:59:36] 2025-06-04 11:59:25,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:59:36] 2025-06-04 11:59:26,078 | INFO     | all data control threads have been joined
[2025-06-04 13:59:36] 2025-06-04 11:59:26,490 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,491 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,491 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,517 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,569 | INFO     | [job] control thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,727 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,830 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:26,866 | INFO     | all payload control threads have been joined
[2025-06-04 13:59:36] 2025-06-04 11:59:26,887 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:27,084 | INFO     | [data] control thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:27,147 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:27,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:27,491 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:27,736 | INFO     | [job] validate thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:27,871 | INFO     | [payload] control thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:28,061 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:29,492 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:59:36] 2025-06-04 11:59:31,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138650376501056)>', '<ExcThread(monitor, started 138649597376256)>']
[2025-06-04 13:59:36] 2025-06-04 11:59:31,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:59:36] 2025-06-04 11:59:31,620 | INFO     | [monitor] control thread has ended
[2025-06-04 13:59:36] 2025-06-04 11:59:36,209 | INFO     | all workflow threads have been joined
[2025-06-04 13:59:36] 2025-06-04 11:59:36,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:59:36] 2025-06-04 11:59:36,216 | INFO     | traces error code: 0
[2025-06-04 13:59:36] 2025-06-04 11:59:36,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:59:36] 2025-06-04 11:59:36,406 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:59:36] 2025-06-04 11:59:36,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:59:36] 2025-06-04 11:59:36,412 [wrapper] pilotpid: 818306
[2025-06-04 13:59:36] 2025-06-04 11:59:36,416 [wrapper] Pilot exit status: 0
[2025-06-04 13:59:36] 2025-06-04 11:59:36,428 [wrapper] pandaids: 6677378300
[2025-06-04 13:59:36] 2025-06-04 11:59:36,455 [wrapper] cleanup supervisor_pilot  853700 818307
[2025-06-04 13:59:36] 2025-06-04 11:59:36,459 [wrapper] Test setup, not cleaning
[2025-06-04 13:59:36] 2025-06-04 11:59:36,463 [wrapper] apfmon messages muted
[2025-06-04 13:59:36] 2025-06-04 11:59:36,466 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:59:36] 2025-06-04 11:59:36,470 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:59:36]  *** Error codes and diagnostics ***
[2025-06-04 13:59:36]     "exeErrorCode": 0,
[2025-06-04 13:59:36]     "exeErrorDiag": "",
[2025-06-04 13:59:36]     "pilotErrorCode": 0,
[2025-06-04 13:59:36]     "pilotErrorDiag": "",
[2025-06-04 13:59:36]  *** Listing of results directory ***
[2025-06-04 13:59:36] total 392548
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 13:59:36] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:59:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:09 run_atlas
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:09 job.xml
[2025-06-04 13:59:36] -rw-r--r-- 2 boinc boinc 214555013 Jun  4 09:09 EVNT.45006593._000041.pool.root.1
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc      9392 Jun  4 09:09 init_data.xml
[2025-06-04 13:59:36] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 13:59:36] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:09 shared
[2025-06-04 13:59:36] -rw-r--r-- 2 boinc boinc    508874 Jun  4 09:09 input.tar.gz
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:09 boinc_lockfile
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc      2521 Jun  4 09:09 pandaJob.out
[2025-06-04 13:59:36] -rw------- 1 boinc boinc    986745 Jun  4 09:10 agis_schedconf.cvmfs.json
[2025-06-04 13:59:36] drwx------ 4 boinc boinc      4096 Jun  4 09:10 pilot3
[2025-06-04 13:59:36] -rw------- 1 boinc boinc 179727420 Jun  4 13:58 HITS.45006595._001021.pool.root.1
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc       530 Jun  4 13:58 boinc_task_state.xml
[2025-06-04 13:59:36] -rw------- 1 boinc boinc        95 Jun  4 13:58 pilot_heartbeat.json
[2025-06-04 13:59:36] -rw------- 1 boinc boinc      1015 Jun  4 13:59 memory_monitor_summary.json
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc        28 Jun  4 13:59 wrapper_checkpoint.txt
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:59 boinc_mmap_file
[2025-06-04 13:59:36] -rw------- 1 boinc boinc   1598969 Jun  4 13:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:59:36] -rw------- 1 boinc boinc    348833 Jun  4 13:59 log.45006595._001021.job.log.tgz.1
[2025-06-04 13:59:36] -rw------- 1 boinc boinc      7658 Jun  4 13:59 heartbeat.json
[2025-06-04 13:59:36] -rw------- 1 boinc boinc      4679 Jun  4 13:59 pilotlog.txt
[2025-06-04 13:59:36] -rw------- 1 boinc boinc   1575654 Jun  4 13:59 log.45006595._001021.job.log.1
[2025-06-04 13:59:36] -rw------- 1 boinc boinc       357 Jun  4 13:59 output.list
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:59 runtime_log
[2025-06-04 13:59:36] -rw------- 1 boinc boinc   1945600 Jun  4 13:59 result.tar.gz
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc      8766 Jun  4 13:59 runtime_log.err
[2025-06-04 13:59:36] -rw------- 1 boinc boinc       652 Jun  4 13:59 IdcMDmtaMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCYVKDmAh9Rbm.diag
[2025-06-04 13:59:36] -rw-r--r-- 1 boinc boinc     20540 Jun  4 13:59 stderr.txt
[2025-06-04 13:59:36] HITS file was successfully produced:
[2025-06-04 13:59:36] -rw------- 1 boinc boinc 179727420 Jun  4 13:58 shared/HITS.pool.root.1
[2025-06-04 13:59:36]  *** Contents of shared directory: ***
[2025-06-04 13:59:36] total 387468
[2025-06-04 13:59:36] -rw-r--r-- 2 boinc boinc 214555013 Jun  4 09:09 ATLAS.root_0
[2025-06-04 13:59:36] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:09 start_atlas.sh
[2025-06-04 13:59:36] -rw-r--r-- 2 boinc boinc    508874 Jun  4 09:09 input.tar.gz
[2025-06-04 13:59:36] -rw------- 1 boinc boinc 179727420 Jun  4 13:58 HITS.pool.root.1
[2025-06-04 13:59:36] -rw------- 1 boinc boinc   1945600 Jun  4 13:59 result.tar.gz
13:59:37 (814720): run_atlas exited; CPU time 51062.435108
13:59:37 (814720): called boinc_finish(0)

</stderr_txt>
]]>

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