Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:02:27 (15224): wrapper (7.7.26015): starting
02:02:27 (15224): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:02:27] Arguments: --nthreads 8
[2025-06-03 02:02:27] Threads: 8
[2025-06-03 02:02:27] Checking for CVMFS
[2025-06-03 02:02:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:02:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:02:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:02:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:02:28] 2.11.2.0 31576 31022 99284 146722 1 210 16231334 25165825 4306 130560 0 15667449 99.836 17324426 1977 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:02:28] CVMFS is ok
[2025-06-03 02:02:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:02:28] Checking for apptainer binary...
[2025-06-03 02:02:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:02:28] Running /usr/bin/apptainer --version
[2025-06-03 02:02:28] apptainer version 1.3.2-1.el7
[2025-06-03 02:02:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:02:29] cg-vwn347.simple-grid.lan
[2025-06-03 02:02:29] apptainer works
[2025-06-03 02:02:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:02:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:02:30] Starting ATLAS job with PandaID=6677376836
[2025-06-03 02:02:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:04:43]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:04:43] 2025-06-03 03:50:20,184 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677376836/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,185 | INFO     | extracted standard info from prmon json
[2025-06-03 07:04:43] 2025-06-03 03:50:20,185 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:04:43] 2025-06-03 03:50:20,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:04:43] 2025-06-03 03:50:20,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:04:43] 2025-06-03 03:50:20,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:04:43] 2025-06-03 03:50:20,191 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:04:43] 2025-06-03 03:50:20,191 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,193 | INFO     | sum of deviations: -60644850740.99998
[2025-06-03 07:04:43] 2025-06-03 03:50:20,193 | INFO     | mean x: 1748915779.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,193 | INFO     | mean y: 2611419.3981900453
[2025-06-03 07:04:43] 2025-06-03 03:50:20,194 | INFO     | -- intersect: 31692190787.60689
[2025-06-03 07:04:43] 2025-06-03 03:50:20,194 | INFO     | intersect: 31692190787.60689
[2025-06-03 07:04:43] 2025-06-03 03:50:20,194 | INFO     | chi2: 2.9197428862592893
[2025-06-03 07:04:43] 2025-06-03 03:50:20,203 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,205 | INFO     | sum of deviations: -41751216430.999985
[2025-06-03 07:04:43] 2025-06-03 03:50:20,205 | INFO     | mean x: 1748915626.5
[2025-06-03 07:04:43] 2025-06-03 03:50:20,205 | INFO     | mean y: 2624210.962962963
[2025-06-03 07:04:43] 2025-06-03 03:50:20,205 | INFO     | -- intersect: 23369875156.407967
[2025-06-03 07:04:43] 2025-06-03 03:50:20,205 | INFO     | intersect: 23369875156.407967
[2025-06-03 07:04:43] 2025-06-03 03:50:20,206 | INFO     | chi2: 2.155300002881751
[2025-06-03 07:04:43] 2025-06-03 03:50:20,206 | INFO     | current chi2=2.155300002881751 (change=26.181856182443724 %)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,206 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,208 | INFO     | sum of deviations: -37689700767.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,208 | INFO     | mean x: 1748915474.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,208 | INFO     | mean y: 2627132.786729858
[2025-06-03 07:04:43] 2025-06-03 03:50:20,208 | INFO     | -- intersect: 22632154045.919052
[2025-06-03 07:04:43] 2025-06-03 03:50:20,208 | INFO     | intersect: 22632154045.919052
[2025-06-03 07:04:43] 2025-06-03 03:50:20,208 | INFO     | chi2: 2.15661779898835
[2025-06-03 07:04:43] 2025-06-03 03:50:20,209 | INFO     | current chi2=2.15661779898835 (change=-0.06114211965095982 %)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,209 | INFO     | right removable region: 210
[2025-06-03 07:04:43] 2025-06-03 03:50:20,209 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,211 | INFO     | sum of deviations: -104999085707.00002
[2025-06-03 07:04:43] 2025-06-03 03:50:20,211 | INFO     | mean x: 1748915931.5
[2025-06-03 07:04:43] 2025-06-03 03:50:20,211 | INFO     | mean y: 2641652.8703703703
[2025-06-03 07:04:43] 2025-06-03 03:50:20,211 | INFO     | -- intersect: 58768364483.83735
[2025-06-03 07:04:43] 2025-06-03 03:50:20,211 | INFO     | intersect: 58768364483.83735
[2025-06-03 07:04:43] 2025-06-03 03:50:20,212 | INFO     | chi2: 1.018545955115355
[2025-06-03 07:04:43] 2025-06-03 03:50:20,212 | INFO     | current chi2=1.018545955115355 (change=65.11521751080302 %)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,212 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,214 | INFO     | sum of deviations: -105459028391.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,214 | INFO     | mean x: 1748916084.0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,214 | INFO     | mean y: 2641953.0189573457
[2025-06-03 07:04:43] 2025-06-03 03:50:20,214 | INFO     | -- intersect: 63322029080.49152
[2025-06-03 07:04:43] 2025-06-03 03:50:20,214 | INFO     | intersect: 63322029080.49152
[2025-06-03 07:04:43] 2025-06-03 03:50:20,215 | INFO     | chi2: 0.97884002297715
[2025-06-03 07:04:43] 2025-06-03 03:50:20,215 | INFO     | current chi2=0.97884002297715 (change=3.898295598622074 %)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,215 | INFO     | left removable region: 20
[2025-06-03 07:04:43] 2025-06-03 03:50:20,215 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 07:04:43] 2025-06-03 03:50:20,217 | INFO     | sum of deviations: -75941231633.5
[2025-06-03 07:04:43] 2025-06-03 03:50:20,217 | INFO     | mean x: 1748916053.5
[2025-06-03 07:04:43] 2025-06-03 03:50:20,217 | INFO     | mean y: 2656748.7842105264
[2025-06-03 07:04:43] 2025-06-03 03:50:20,217 | INFO     | -- intersect: 62450781887.96813
[2025-06-03 07:04:43] 2025-06-03 03:50:20,217 | INFO     | intersect: 62450781887.96813
[2025-06-03 07:04:43] 2025-06-03 03:50:20,224 | INFO     | chi2: 0.16738208247383474
[2025-06-03 07:04:43] 2025-06-03 03:50:20,224 | INFO     | -- intersect: 62450781887.96813
[2025-06-03 07:04:43] 2025-06-03 03:50:20,224 | INFO     | current memory leak: -35.71 B/s (using 190 data points, chi2=0.17)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,225 | INFO     | ..............................
[2025-06-03 07:04:43] 2025-06-03 03:50:20,225 | INFO     | . Timing measurements:
[2025-06-03 07:04:43] 2025-06-03 03:50:20,225 | INFO     | . get job = 0 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | . initial setup = 2 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | . payload setup = 20 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | . stage-in = 0 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | . payload execution = 13487 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | . stage-out = 4 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | . log creation = 1 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,226 | INFO     | ..............................
[2025-06-03 07:04:43] 2025-06-03 03:50:20,355 | INFO     | 
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | job summary report
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | --------------------------------------------------
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | PanDA job id: 6677376836
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | task id: 45006595
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | errors: (none)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | pilot state: finished 
[2025-06-03 07:04:43] 2025-06-03 03:50:20,356 | INFO     | transexitcode: 0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | exeerrorcode: 0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | exeerrordiag: 
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | exitcode: 0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | exitmsg: OK
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | cpuconsumptiontime: 49674 s
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | nevents: 400
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | neventsw: 0
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | pid: 29475
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | pgrp: 29475
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | corecount: 8
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | event service: False
[2025-06-03 07:04:43] 2025-06-03 03:50:20,357 | INFO     | sizes: {0: 2405002, 1: 2405201, 12: 2405201, 17: 2405435, 23: 2405463, 13511: 2435058, 13512: 2435185, 13517: 2444240, 13611: 2444354}
[2025-06-03 07:04:43] 2025-06-03 03:50:20,358 | INFO     | --------------------------------------------------
[2025-06-03 07:04:43] 2025-06-03 03:50:20,358 | INFO     | 
[2025-06-03 07:04:43] 2025-06-03 03:50:20,358 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 07:04:43] 2025-06-03 03:50:20,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | job 6677376836 has completed (purged errors)
[2025-06-03 07:04:43] 2025-06-03 03:50:20,499 | INFO     | overall cleanup function is called
[2025-06-03 07:04:43] 2025-06-03 03:50:21,508 | INFO     | --- collectZombieJob: --- 10, [29475]
[2025-06-03 07:04:43] 2025-06-03 03:50:21,509 | INFO     | zombie collector waiting for pid 29475
[2025-06-03 07:04:43] 2025-06-03 03:50:21,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:04:43] 2025-06-03 03:50:21,509 | INFO     | collected zombie processes
[2025-06-03 07:04:43] 2025-06-03 03:50:21,509 | INFO     | will attempt to kill all subprocesses of pid=29475
[2025-06-03 07:04:43] 2025-06-03 03:50:21,614 | INFO     | process IDs to be killed: [29475] (in reverse order)
[2025-06-03 07:04:43] 2025-06-03 03:50:21,672 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:04:43] 2025-06-03 03:50:21,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:04:43] 2025-06-03 03:50:21,677 | INFO     | did not find any defunct processes belonging to 29475
[2025-06-03 07:04:43] 2025-06-03 03:50:21,680 | INFO     | did not find any defunct processes belonging to 29475
[2025-06-03 07:04:43] 2025-06-03 03:50:21,680 | INFO     | ready for new job
[2025-06-03 07:04:43] 2025-06-03 03:50:21,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:04:43] 2025-06-03 03:50:21,683 | INFO     | **************************************
[2025-06-03 07:04:43] 2025-06-03 03:50:21,683 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:04:43] 2025-06-03 03:50:21,683 | INFO     | **************************************
[2025-06-03 07:04:43] 2025-06-03 03:50:21,683 | INFO     | 
[2025-06-03 07:04:43] 2025-06-03 03:50:21,684 | INFO     | pilot is running in a VM
[2025-06-03 07:04:43] 2025-06-03 03:50:21,684 | INFO     | architecture information:
[2025-06-03 07:04:43] 2025-06-03 03:50:21,684 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:04:43] 2025-06-03 03:50:21,775 | INFO     | cat /etc/os-release:
[2025-06-03 07:04:43] NAME="CentOS Linux"
[2025-06-03 07:04:43] VERSION="7 (Core)"
[2025-06-03 07:04:43] ID="centos"
[2025-06-03 07:04:43] ID_LIKE="rhel fedora"
[2025-06-03 07:04:43] VERSION_ID="7"
[2025-06-03 07:04:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:04:43] ANSI_COLOR="0;31"
[2025-06-03 07:04:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:04:43] HOME_URL="https://www.centos.org/"
[2025-06-03 07:04:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:04:43] 
[2025-06-03 07:04:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:04:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:04:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:04:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:04:43] 
[2025-06-03 07:04:43] 2025-06-03 03:50:21,776 | INFO     | **************************************
[2025-06-03 07:04:43] 2025-06-03 03:50:22,280 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 07:04:43] 2025-06-03 03:50:22,369 | INFO     | sufficient remaining disk space (496862494720 B)
[2025-06-03 07:04:43] 2025-06-03 03:50:22,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:04:43] 2025-06-03 03:50:22,370 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:04:43] 2025-06-03 03:50:22,370 | INFO     | update_server=False
[2025-06-03 07:04:43] 2025-06-03 03:50:22,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:04:43] 2025-06-03 03:50:22,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:04:43] 2025-06-03 03:50:22,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:04:43] 2025-06-03 03:50:22,373 | INFO     | aborting loop
[2025-06-03 07:04:43] 2025-06-03 03:50:22,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:04:43] 2025-06-03 03:50:22,429 | INFO     | all payload control threads have been joined
[2025-06-03 07:04:43] 2025-06-03 03:50:22,727 | INFO     | all job control threads have been joined
[2025-06-03 07:04:43] 2025-06-03 03:50:22,882 | INFO     | all data control threads have been joined
[2025-06-03 07:04:43] 2025-06-03 03:50:23,250 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:04:43] 2025-06-03 03:50:23,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:04:43] 2025-06-03 03:50:23,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:04:43] 2025-06-03 03:50:23,376 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,381 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,436 | INFO     | [payload] control thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,585 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,734 | INFO     | [job] control thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,888 | INFO     | [data] control thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:23,950 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:24,378 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:24,503 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:24,572 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:24,675 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:24,677 | INFO     | [job] validate thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:24,801 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:25,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:04:43] 2025-06-03 03:50:26,377 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:26,386 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:04:43] 2025-06-03 03:50:28,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634055067456)>', '<ExcThread(monitor, started 140633360541440)>']
[2025-06-03 07:04:43] 2025-06-03 03:50:28,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:04:43] 2025-06-03 03:50:28,279 | INFO     | [monitor] control thread has ended
[2025-06-03 07:04:43] 2025-06-03 03:50:33,252 | INFO     | all workflow threads have been joined
[2025-06-03 07:04:43] 2025-06-03 03:50:33,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:04:43] 2025-06-03 03:50:33,252 | INFO     | traces error code: 0
[2025-06-03 07:04:43] 2025-06-03 03:50:33,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:04:43] 2025-06-03 03:50:33,510 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:04:43] 2025-06-03 03:50:33,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:04:43] 2025-06-03 03:50:33,677 [wrapper] pilotpid: 18943
[2025-06-03 07:04:43] 2025-06-03 03:50:33,771 [wrapper] Pilot exit status: 0
[2025-06-03 07:04:43] 2025-06-03 03:50:34,037 [wrapper] pandaids: 6677376836
[2025-06-03 07:04:43] 2025-06-03 03:50:34,463 [wrapper] cleanup supervisor_pilot 22723 18944
[2025-06-03 07:04:43] 2025-06-03 03:50:34,566 [wrapper] Test setup, not cleaning
[2025-06-03 07:04:43] 2025-06-03 03:50:34,661 [wrapper] apfmon messages muted
[2025-06-03 07:04:43] 2025-06-03 03:50:34,737 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:04:43] 2025-06-03 03:50:34,827 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:04:43]  *** Error codes and diagnostics ***
[2025-06-03 07:04:43]     "exeErrorCode": 0,
[2025-06-03 07:04:43]     "exeErrorDiag": "",
[2025-06-03 07:04:43]     "pilotErrorCode": 0,
[2025-06-03 07:04:43]     "pilotErrorDiag": "",
[2025-06-03 07:04:43]  *** Listing of results directory ***
[2025-06-03 07:04:43] total 394888
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 07:04:43] -rwx------. 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:04:43] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:02 run_atlas
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:02 job.xml
[2025-06-03 07:04:43] -rw-r--r--. 2 boinc boinc 214700592 Jun  3 02:02 EVNT.45006593._000022.pool.root.1
[2025-06-03 07:04:43] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:02 shared
[2025-06-03 07:04:43] -rw-r--r--. 2 boinc boinc    508869 Jun  3 02:02 input.tar.gz
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc      6392 Jun  3 02:02 init_data.xml
[2025-06-03 07:04:43] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:02 start_atlas.sh
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:02 boinc_lockfile
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc      2519 Jun  3 02:02 pandaJob.out
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc    988091 Jun  3 02:02 agis_schedconf.cvmfs.json
[2025-06-03 07:04:43] drwx------. 4 boinc boinc      4096 Jun  3 02:02 pilot3
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc 182683675 Jun  3 05:47 HITS.45006595._000543.pool.root.1
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc       530 Jun  3 05:47 boinc_task_state.xml
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc      1018 Jun  3 05:48 memory_monitor_summary.json
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc   1603667 Jun  3 05:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc    387647 Jun  3 05:48 log.45006595._000543.job.log.tgz.1
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc        95 Jun  3 05:49 pilot_heartbeat.json
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc      7683 Jun  3 05:50 heartbeat.json
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc      4417 Jun  3 05:50 pilotlog.txt
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc   1189434 Jun  3 05:50 log.45006595._000543.job.log.1
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc       357 Jun  3 05:50 output.list
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc       620 Jun  3 05:50 runtime_log
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc   1597440 Jun  3 05:50 result.tar.gz
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc      8673 Jun  3 05:50 runtime_log.err
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc       656 Jun  3 05:50 RU4KDmtaMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCXVKDmJYXIzn.diag
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:04 boinc_mmap_file
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:04 wrapper_checkpoint.txt
[2025-06-03 07:04:43] -rw-r--r--. 1 boinc boinc     20494 Jun  3 07:04 stderr.txt
[2025-06-03 07:04:43] HITS file was successfully produced:
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc 182683675 Jun  3 05:47 shared/HITS.pool.root.1
[2025-06-03 07:04:43]  *** Contents of shared directory: ***
[2025-06-03 07:04:43] total 390152
[2025-06-03 07:04:43] -rw-r--r--. 2 boinc boinc 214700592 Jun  3 02:02 ATLAS.root_0
[2025-06-03 07:04:43] -rw-r--r--. 2 boinc boinc    508869 Jun  3 02:02 input.tar.gz
[2025-06-03 07:04:43] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:02 start_atlas.sh
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc 182683675 Jun  3 05:47 HITS.pool.root.1
[2025-06-03 07:04:43] -rw-------. 1 boinc boinc   1597440 Jun  3 05:50 result.tar.gz
07:04:45 (15224): run_atlas exited; CPU time 49845.036408
07:04:45 (15224): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN