Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:11 (20763): wrapper (7.7.26015): starting
03:32:11 (20763): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:32:11] Arguments: --nthreads 8
[2025-06-03 03:32:11] Threads: 8
[2025-06-03 03:32:11] Checking for CVMFS
[2025-06-03 03:32:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:32:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:32:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:32:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:32:13] 2.11.2.0 22385 31293 88240 146723 2 16 24655188 25165824 4634 130560 0 17530327 99.812 18502618 2287 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:32:13] CVMFS is ok
[2025-06-03 03:32:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:32:13] Checking for apptainer binary...
[2025-06-03 03:32:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:32:13] Running /usr/bin/apptainer --version
[2025-06-03 03:32:14] apptainer version 1.3.2-1.el7
[2025-06-03 03:32:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:23:16] cg-vwn497.simple-grid.lan
[2025-06-03 04:23:16] apptainer works
[2025-06-03 04:23:16] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:23:16] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:23:16] Starting ATLAS job with PandaID=6677376838
[2025-06-03 04:23:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:29:18]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:29:19] 2025-06-03 06:04:26,480 | INFO     | extracted standard info from prmon json
[2025-06-03 08:29:19] 2025-06-03 06:04:26,480 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:29:19] 2025-06-03 06:04:26,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:29:19] 2025-06-03 06:04:26,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:29:19] 2025-06-03 06:04:26,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:29:19] 2025-06-03 06:04:26,484 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:29:19] 2025-06-03 06:04:26,485 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,486 | INFO     | sum of deviations: 25478338479.99997
[2025-06-03 08:29:19] 2025-06-03 06:04:26,486 | INFO     | mean x: 1748924305.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,486 | INFO     | mean y: 2512310.004878049
[2025-06-03 08:29:19] 2025-06-03 06:04:26,486 | INFO     | -- intersect: -16678117464.539022
[2025-06-03 08:29:19] 2025-06-03 06:04:26,487 | INFO     | intersect: -16678117464.539022
[2025-06-03 08:29:19] 2025-06-03 06:04:26,487 | INFO     | chi2: 7.765790964840351
[2025-06-03 08:29:19] 2025-06-03 06:04:26,487 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,489 | INFO     | sum of deviations: 40134382852.5
[2025-06-03 08:29:19] 2025-06-03 06:04:26,489 | INFO     | mean x: 1748924152.5
[2025-06-03 08:29:19] 2025-06-03 06:04:26,489 | INFO     | mean y: 2523813.005
[2025-06-03 08:29:19] 2025-06-03 06:04:26,489 | INFO     | -- intersect: -28293799632.336884
[2025-06-03 08:29:19] 2025-06-03 06:04:26,489 | INFO     | intersect: -28293799632.336884
[2025-06-03 08:29:19] 2025-06-03 06:04:26,489 | INFO     | chi2: 7.0585308379976786
[2025-06-03 08:29:19] 2025-06-03 06:04:26,490 | INFO     | current chi2=7.0585308379976786 (change=9.107380433555258 %)
[2025-06-03 08:29:19] 2025-06-03 06:04:26,490 | INFO     | right removable region: 199
[2025-06-03 08:29:19] 2025-06-03 06:04:26,490 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,491 | INFO     | sum of deviations: -48105921046.50001
[2025-06-03 08:29:19] 2025-06-03 06:04:26,492 | INFO     | mean x: 1748924457.5
[2025-06-03 08:29:19] 2025-06-03 06:04:26,492 | INFO     | mean y: 2571096.715
[2025-06-03 08:29:19] 2025-06-03 06:04:26,492 | INFO     | -- intersect: 33919149407.082943
[2025-06-03 08:29:19] 2025-06-03 06:04:26,492 | INFO     | intersect: 33919149407.082943
[2025-06-03 08:29:19] 2025-06-03 06:04:26,492 | INFO     | chi2: 2.6763374781340286
[2025-06-03 08:29:19] 2025-06-03 06:04:26,492 | INFO     | current chi2=2.6763374781340286 (change=65.53683339854038 %)
[2025-06-03 08:29:19] 2025-06-03 06:04:26,493 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,494 | INFO     | sum of deviations: -86229024587.00003
[2025-06-03 08:29:19] 2025-06-03 06:04:26,494 | INFO     | mean x: 1748924610.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,494 | INFO     | mean y: 2602924.0615384616
[2025-06-03 08:29:19] 2025-06-03 06:04:26,494 | INFO     | -- intersect: 65595033724.125824
[2025-06-03 08:29:19] 2025-06-03 06:04:26,494 | INFO     | intersect: 65595033724.125824
[2025-06-03 08:29:19] 2025-06-03 06:04:26,495 | INFO     | chi2: 1.0158093737141065
[2025-06-03 08:29:19] 2025-06-03 06:04:26,495 | INFO     | current chi2=1.0158093737141065 (change=62.04479509727825 %)
[2025-06-03 08:29:19] 2025-06-03 06:04:26,495 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 08:29:19] 2025-06-03 06:04:26,496 | INFO     | sum of deviations: -86897204221.50003
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | mean x: 1748924762.5
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | mean y: 2603461.447368421
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | -- intersect: 71460418790.24112
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | intersect: 71460418790.24112
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | chi2: 0.9678323956959309
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | current chi2=0.9678323956959309 (change=4.723029660846427 %)
[2025-06-03 08:29:19] 2025-06-03 06:04:26,497 | INFO     | left removable region: 30
[2025-06-03 08:29:19] 2025-06-03 06:04:26,498 | INFO     | sum of square deviations: 1496660620.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,499 | INFO     | sum of deviations: -58543416784.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,499 | INFO     | mean x: 1748925037.0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,499 | INFO     | mean y: 2606938.1834319527
[2025-06-03 08:29:19] 2025-06-03 06:04:26,499 | INFO     | -- intersect: 68413605394.91013
[2025-06-03 08:29:19] 2025-06-03 06:04:26,499 | INFO     | intersect: 68413605394.91013
[2025-06-03 08:29:19] 2025-06-03 06:04:26,500 | INFO     | chi2: 0.15280239924762276
[2025-06-03 08:29:19] 2025-06-03 06:04:26,500 | INFO     | -- intersect: 68413605394.91013
[2025-06-03 08:29:19] 2025-06-03 06:04:26,500 | INFO     | current memory leak: -39.12 B/s (using 169 data points, chi2=0.15)
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | ..............................
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . Timing measurements:
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . get job = 0 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . initial setup = 5 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . payload setup = 156 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . stage-in = 0 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . payload execution = 12653 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . stage-out = 3 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,501 | INFO     | . log creation = 1 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,502 | INFO     | ..............................
[2025-06-03 08:29:19] 2025-06-03 06:04:26,637 | INFO     | 
[2025-06-03 08:29:19] 2025-06-03 06:04:26,637 | INFO     | job summary report
[2025-06-03 08:29:19] 2025-06-03 06:04:26,637 | INFO     | --------------------------------------------------
[2025-06-03 08:29:19] 2025-06-03 06:04:26,637 | INFO     | PanDA job id: 6677376838
[2025-06-03 08:29:19] 2025-06-03 06:04:26,637 | INFO     | task id: 45006595
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | errors: (none)
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | pilot state: finished 
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | transexitcode: 0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | exeerrorcode: 0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | exeerrordiag: 
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | exitcode: 0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | exitmsg: OK
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | cpuconsumptiontime: 45408 s
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | nevents: 400
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | neventsw: 0
[2025-06-03 08:29:19] 2025-06-03 06:04:26,638 | INFO     | pid: 29958
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | pgrp: 29958
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | corecount: 8
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | event service: False
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | sizes: {0: 2404344, 1: 2405030, 2: 2405229, 12: 2405229, 23: 2405257, 34: 2405285, 45: 2405441, 55: 2405469, 66: 2405497, 77: 2405525, 85: 2405787, 88: 2406095, 12
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | --------------------------------------------------
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | 
[2025-06-03 08:29:19] 2025-06-03 06:04:26,639 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 08:29:19] 2025-06-03 06:04:27,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:29:19] 2025-06-03 06:04:27,038 | INFO     | job 6677376838 has completed (purged errors)
[2025-06-03 08:29:19] 2025-06-03 06:04:27,038 | INFO     | overall cleanup function is called
[2025-06-03 08:29:19] 2025-06-03 06:04:28,046 | INFO     | --- collectZombieJob: --- 10, [29958]
[2025-06-03 08:29:19] 2025-06-03 06:04:28,046 | INFO     | zombie collector waiting for pid 29958
[2025-06-03 08:29:19] 2025-06-03 06:04:28,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:29:19] 2025-06-03 06:04:28,046 | INFO     | collected zombie processes
[2025-06-03 08:29:19] 2025-06-03 06:04:28,047 | INFO     | will attempt to kill all subprocesses of pid=29958
[2025-06-03 08:29:19] 2025-06-03 06:04:28,185 | INFO     | process IDs to be killed: [29958] (in reverse order)
[2025-06-03 08:29:19] 2025-06-03 06:04:28,847 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:29:19] 2025-06-03 06:04:28,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:29:19] 2025-06-03 06:04:28,850 | INFO     | did not find any defunct processes belonging to 29958
[2025-06-03 08:29:19] 2025-06-03 06:04:28,858 | INFO     | did not find any defunct processes belonging to 29958
[2025-06-03 08:29:19] 2025-06-03 06:04:28,859 | INFO     | ready for new job
[2025-06-03 08:29:19] 2025-06-03 06:04:28,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:29:19] 2025-06-03 06:04:28,861 | INFO     | **************************************
[2025-06-03 08:29:19] 2025-06-03 06:04:28,861 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:29:19] 2025-06-03 06:04:28,861 | INFO     | **************************************
[2025-06-03 08:29:19] 2025-06-03 06:04:28,861 | INFO     | 
[2025-06-03 08:29:19] 2025-06-03 06:04:28,861 | INFO     | pilot is running in a VM
[2025-06-03 08:29:19] 2025-06-03 06:04:28,862 | INFO     | architecture information:
[2025-06-03 08:29:19] 2025-06-03 06:04:28,879 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:29:19] 2025-06-03 06:04:29,140 | INFO     | cat /etc/os-release:
[2025-06-03 08:29:19] NAME="CentOS Linux"
[2025-06-03 08:29:19] VERSION="7 (Core)"
[2025-06-03 08:29:19] ID="centos"
[2025-06-03 08:29:19] ID_LIKE="rhel fedora"
[2025-06-03 08:29:19] VERSION_ID="7"
[2025-06-03 08:29:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:29:19] ANSI_COLOR="0;31"
[2025-06-03 08:29:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:29:19] HOME_URL="https://www.centos.org/"
[2025-06-03 08:29:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:29:19] 
[2025-06-03 08:29:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:29:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:29:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:29:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:29:19] 
[2025-06-03 08:29:19] 2025-06-03 06:04:29,140 | INFO     | **************************************
[2025-06-03 08:29:19] 2025-06-03 06:04:29,643 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 08:29:19] 2025-06-03 06:04:29,816 | INFO     | sufficient remaining disk space (497431871488 B)
[2025-06-03 08:29:19] 2025-06-03 06:04:29,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:29:19] 2025-06-03 06:04:29,816 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:29:19] 2025-06-03 06:04:29,816 | INFO     | update_server=False
[2025-06-03 08:29:19] 2025-06-03 06:04:29,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:29:19] 2025-06-03 06:04:29,817 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:29:19] 2025-06-03 06:04:29,817 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:29:19] 2025-06-03 06:04:29,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:29:19] 2025-06-03 06:04:29,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:29:19] 2025-06-03 06:04:30,030 | INFO     | all data control threads have been joined
[2025-06-03 08:29:19] 2025-06-03 06:04:30,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:29:19] 2025-06-03 06:04:30,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:29:19] 2025-06-03 06:04:30,668 | INFO     | aborting loop
[2025-06-03 08:29:19] 2025-06-03 06:04:30,746 | INFO     | all payload control threads have been joined
[2025-06-03 08:29:19] 2025-06-03 06:04:30,822 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:30,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:29:19] 2025-06-03 06:04:31,036 | INFO     | [data] control thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,064 | INFO     | all job control threads have been joined
[2025-06-03 08:29:19] 2025-06-03 06:04:31,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,525 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,616 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:29:19] 2025-06-03 06:04:31,673 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,703 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,736 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,752 | INFO     | [payload] control thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,774 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:31,880 | INFO     | [job] validate thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:32,070 | INFO     | [job] control thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:32,097 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:32,644 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:32,850 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:34,440 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:29:19] 2025-06-03 06:04:34,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680899934016)>', '<ExcThread(monitor, started 140680244492032)>']
[2025-06-03 08:29:19] 2025-06-03 06:04:35,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:29:19] 2025-06-03 06:04:35,852 | INFO     | [monitor] control thread has ended
[2025-06-03 08:29:19] 2025-06-03 06:04:39,978 | INFO     | all workflow threads have been joined
[2025-06-03 08:29:19] 2025-06-03 06:04:39,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:29:19] 2025-06-03 06:04:39,979 | INFO     | traces error code: 0
[2025-06-03 08:29:19] 2025-06-03 06:04:39,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:29:19] 2025-06-03 06:04:40,200 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:29:19] 2025-06-03 06:04:40,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:29:19] 2025-06-03 06:04:40,218 [wrapper] pilotpid: 19304
[2025-06-03 08:29:19] 2025-06-03 06:04:40,224 [wrapper] Pilot exit status: 0
[2025-06-03 08:29:19] 2025-06-03 06:04:40,257 [wrapper] pandaids: 6677376838
[2025-06-03 08:29:19] 2025-06-03 06:04:40,357 [wrapper] cleanup supervisor_pilot 29486 19305
[2025-06-03 08:29:19] 2025-06-03 06:04:40,464 [wrapper] Test setup, not cleaning
[2025-06-03 08:29:19] 2025-06-03 06:04:40,572 [wrapper] apfmon messages muted
[2025-06-03 08:29:19] 2025-06-03 06:04:40,668 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:29:19] 2025-06-03 06:04:40,734 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:29:19]  *** Error codes and diagnostics ***
[2025-06-03 08:29:19]     "exeErrorCode": 0,
[2025-06-03 08:29:19]     "exeErrorDiag": "",
[2025-06-03 08:29:19]     "pilotErrorCode": 0,
[2025-06-03 08:29:19]     "pilotErrorDiag": "",
[2025-06-03 08:29:19]  *** Listing of results directory ***
[2025-06-03 08:29:19] total 389652
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 08:29:19] -rwx------. 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:29:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:32 run_atlas
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:32 job.xml
[2025-06-03 08:29:19] -rw-r--r--. 2 boinc boinc 214700592 Jun  3 03:32 EVNT.45006593._000022.pool.root.1
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc      6392 Jun  3 03:32 init_data.xml
[2025-06-03 08:29:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:32 start_atlas.sh
[2025-06-03 08:29:19] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:32 shared
[2025-06-03 08:29:19] -rw-r--r--. 2 boinc boinc    508872 Jun  3 03:32 input.tar.gz
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:32 boinc_lockfile
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc      2519 Jun  3 04:23 pandaJob.out
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc    988073 Jun  3 04:26 agis_schedconf.cvmfs.json
[2025-06-03 08:29:19] drwx------. 4 boinc boinc      4096 Jun  3 04:26 pilot3
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc 177457151 Jun  3 08:01 HITS.45006595._000545.pool.root.1
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:01 boinc_task_state.xml
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc      1022 Jun  3 08:03 memory_monitor_summary.json
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc   1603667 Jun  3 08:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc    380952 Jun  3 08:03 log.45006595._000545.job.log.tgz.1
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc        95 Jun  3 08:03 pilot_heartbeat.json
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc      7695 Jun  3 08:04 heartbeat.json
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc      4540 Jun  3 08:04 pilotlog.txt
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc   1125430 Jun  3 08:04 log.45006595._000545.job.log.1
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc       357 Jun  3 08:04 output.list
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:04 runtime_log
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc   1525760 Jun  3 08:04 result.tar.gz
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc      8673 Jun  3 08:04 runtime_log.err
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc       656 Jun  3 08:04 PnLLDmoaMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsWVKDmcIN4Qn.diag
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:29 boinc_mmap_file
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:29 wrapper_checkpoint.txt
[2025-06-03 08:29:19] -rw-r--r--. 1 boinc boinc     20505 Jun  3 08:29 stderr.txt
[2025-06-03 08:29:19] HITS file was successfully produced:
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc 177457151 Jun  3 08:01 shared/HITS.pool.root.1
[2025-06-03 08:29:19]  *** Contents of shared directory: ***
[2025-06-03 08:29:19] total 384980
[2025-06-03 08:29:19] -rw-r--r--. 2 boinc boinc 214700592 Jun  3 03:32 ATLAS.root_0
[2025-06-03 08:29:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:32 start_atlas.sh
[2025-06-03 08:29:19] -rw-r--r--. 2 boinc boinc    508872 Jun  3 03:32 input.tar.gz
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc 177457151 Jun  3 08:01 HITS.pool.root.1
[2025-06-03 08:29:19] -rw-------. 1 boinc boinc   1525760 Jun  3 08:04 result.tar.gz
08:29:20 (20763): run_atlas exited; CPU time 45574.067850
08:29:20 (20763): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN