Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:50 (3921632): wrapper (7.7.26015): starting
11:43:50 (3921632): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:43:50] Arguments: --nthreads 4
[2025-06-04 11:43:50] Threads: 4
[2025-06-04 11:43:50] Checking for CVMFS
[2025-06-04 11:43:50] No cvmfs_config command found, will try listing directly
[2025-06-04 11:43:50] CVMFS is ok
[2025-06-04 11:43:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:43:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:43:50] Further information can be found at the LHC@home message board.
[2025-06-04 11:43:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:43:50] Checking for apptainer binary...
[2025-06-04 11:43:50] which: no apptainer in ((null))
[2025-06-04 11:43:50] apptainer is not installed, using version from CVMFS
[2025-06-04 11:43:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:43:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-04 11:43:51] apptainer works
[2025-06-04 11:43:51] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:43:51] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:43:51] Starting ATLAS job with PandaID=6677380610
[2025-06-04 11:43:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:35:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:35:14] 2025-06-04 12:30:48,963 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:35:14] 2025-06-04 12:30:48,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:35:14] 2025-06-04 12:30:48,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:35:14] 2025-06-04 12:30:48,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:35:14] 2025-06-04 12:30:48,967 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:35:14] 2025-06-04 12:30:48,968 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,968 | INFO     | sum of deviations: 10351180920.500002
[2025-06-04 14:35:14] 2025-06-04 12:30:48,969 | INFO     | mean x: 1749035239.5
[2025-06-04 14:35:14] 2025-06-04 12:30:48,969 | INFO     | mean y: 2298732.3353658537
[2025-06-04 14:35:14] 2025-06-04 12:30:48,969 | INFO     | -- intersect: -13234855785.791775
[2025-06-04 14:35:14] 2025-06-04 12:30:48,969 | INFO     | intersect: -13234855785.791775
[2025-06-04 14:35:14] 2025-06-04 12:30:48,969 | INFO     | chi2: 2.532854933566468
[2025-06-04 14:35:14] 2025-06-04 12:30:48,969 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,970 | INFO     | sum of deviations: 20151921082.000008
[2025-06-04 14:35:14] 2025-06-04 12:30:48,970 | INFO     | mean x: 1749035087.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,971 | INFO     | mean y: 2310734.9874213836
[2025-06-04 14:35:14] 2025-06-04 12:30:48,971 | INFO     | -- intersect: -28276579206.21107
[2025-06-04 14:35:14] 2025-06-04 12:30:48,971 | INFO     | intersect: -28276579206.21107
[2025-06-04 14:35:14] 2025-06-04 12:30:48,971 | INFO     | chi2: 1.7494540904056568
[2025-06-04 14:35:14] 2025-06-04 12:30:48,971 | INFO     | current chi2=1.7494540904056568 (change=30.929558293246522 %)
[2025-06-04 14:35:14] 2025-06-04 12:30:48,971 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 14:35:14] 2025-06-04 12:30:48,972 | INFO     | sum of deviations: 19572249153.499996
[2025-06-04 14:35:14] 2025-06-04 12:30:48,972 | INFO     | mean x: 1749034934.5
[2025-06-04 14:35:14] 2025-06-04 12:30:48,972 | INFO     | mean y: 2309958.9545454546
[2025-06-04 14:35:14] 2025-06-04 12:30:48,973 | INFO     | -- intersect: -30226214313.1046
[2025-06-04 14:35:14] 2025-06-04 12:30:48,973 | INFO     | intersect: -30226214313.1046
[2025-06-04 14:35:14] 2025-06-04 12:30:48,973 | INFO     | chi2: 1.7514479537218792
[2025-06-04 14:35:14] 2025-06-04 12:30:48,973 | INFO     | current chi2=1.7514479537218792 (change=-0.11397059958058645 %)
[2025-06-04 14:35:14] 2025-06-04 12:30:48,973 | INFO     | right removable region: 153
[2025-06-04 14:35:14] 2025-06-04 12:30:48,973 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,974 | INFO     | sum of deviations: -17242860179.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,975 | INFO     | mean x: 1749035392.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,975 | INFO     | mean y: 2333040.465408805
[2025-06-04 14:35:14] 2025-06-04 12:30:48,975 | INFO     | -- intersect: 24198985474.71456
[2025-06-04 14:35:14] 2025-06-04 12:30:48,975 | INFO     | intersect: 24198985474.71456
[2025-06-04 14:35:14] 2025-06-04 12:30:48,976 | INFO     | chi2: 0.8270947520610171
[2025-06-04 14:35:14] 2025-06-04 12:30:48,976 | INFO     | current chi2=0.8270947520610171 (change=67.34535637631643 %)
[2025-06-04 14:35:14] 2025-06-04 12:30:48,976 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 14:35:14] 2025-06-04 12:30:48,977 | INFO     | sum of deviations: -16979440188.499998
[2025-06-04 14:35:14] 2025-06-04 12:30:48,977 | INFO     | mean x: 1749035544.5
[2025-06-04 14:35:14] 2025-06-04 12:30:48,977 | INFO     | mean y: 2332660.9415584416
[2025-06-04 14:35:14] 2025-06-04 12:30:48,977 | INFO     | -- intersect: 26226380538.44085
[2025-06-04 14:35:14] 2025-06-04 12:30:48,977 | INFO     | intersect: 26226380538.44085
[2025-06-04 14:35:14] 2025-06-04 12:30:48,978 | INFO     | chi2: 0.8239358326018584
[2025-06-04 14:35:14] 2025-06-04 12:30:48,978 | INFO     | current chi2=0.8239358326018584 (change=0.3819295735206951 %)
[2025-06-04 14:35:14] 2025-06-04 12:30:48,978 | INFO     | left removable region: 20
[2025-06-04 14:35:14] 2025-06-04 12:30:48,978 | INFO     | sum of square deviations: 729472282.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,979 | INFO     | sum of deviations: -4355966141.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,979 | INFO     | mean x: 1749035514.0
[2025-06-04 14:35:14] 2025-06-04 12:30:48,979 | INFO     | mean y: 2343201.7593984962
[2025-06-04 14:35:14] 2025-06-04 12:30:48,979 | INFO     | -- intersect: 10446522735.90451
[2025-06-04 14:35:14] 2025-06-04 12:30:48,979 | INFO     | intersect: 10446522735.90451
[2025-06-04 14:35:14] 2025-06-04 12:30:48,979 | INFO     | chi2: 0.006938195577094322
[2025-06-04 14:35:14] 2025-06-04 12:30:48,980 | INFO     | -- intersect: 10446522735.90451
[2025-06-04 14:35:14] 2025-06-04 12:30:48,980 | INFO     | current memory leak: -5.97 B/s (using 133 data points, chi2=0.01)
[2025-06-04 14:35:14] 2025-06-04 12:30:48,980 | INFO     | ..............................
[2025-06-04 14:35:14] 2025-06-04 12:30:48,980 | INFO     | . Timing measurements:
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . get job = 0 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . initial setup = 1 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . payload setup = 6 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . stage-in = 0 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . payload execution = 9972 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . stage-out = 0 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | . log creation = 0 s
[2025-06-04 14:35:14] 2025-06-04 12:30:48,981 | INFO     | ..............................
[2025-06-04 14:35:14] 2025-06-04 12:30:49,084 | INFO     | 
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | job summary report
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | --------------------------------------------------
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | PanDA job id: 6677380610
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | task id: 45006595
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | errors: (none)
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | pilot state: finished 
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | transexitcode: 0
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | exeerrorcode: 0
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | exeerrordiag: 
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | exitcode: 0
[2025-06-04 14:35:14] 2025-06-04 12:30:49,085 | INFO     | exitmsg: OK
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | cpuconsumptiontime: 38067 s
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | nevents: 400
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | neventsw: 0
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | pid: 3942533
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | pgrp: 3942533
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | corecount: 4
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | event service: False
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | sizes: {0: 2405016, 1: 2405215, 5: 2405421, 11: 2405477, 9982: 2433791, 9983: 2433790, 9984: 2442937, 9987: 2442993, 9992: 2443163}
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | --------------------------------------------------
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | 
[2025-06-04 14:35:14] 2025-06-04 12:30:49,086 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-04 14:35:14] 2025-06-04 12:30:49,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | job 6677380610 has completed (purged errors)
[2025-06-04 14:35:14] 2025-06-04 12:30:49,110 | INFO     | overall cleanup function is called
[2025-06-04 14:35:14] 2025-06-04 12:30:50,118 | INFO     | --- collectZombieJob: --- 10, [3942533]
[2025-06-04 14:35:14] 2025-06-04 12:30:50,119 | INFO     | zombie collector waiting for pid 3942533
[2025-06-04 14:35:14] 2025-06-04 12:30:50,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:35:14] 2025-06-04 12:30:50,119 | INFO     | collected zombie processes
[2025-06-04 14:35:14] 2025-06-04 12:30:50,119 | INFO     | will attempt to kill all subprocesses of pid=3942533
[2025-06-04 14:35:14] 2025-06-04 12:30:50,515 | INFO     | process IDs to be killed: [3942533] (in reverse order)
[2025-06-04 14:35:14] 2025-06-04 12:30:50,619 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:35:14] 2025-06-04 12:30:50,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:35:14] 2025-06-04 12:30:50,631 | INFO     | did not find any defunct processes belonging to 3942533
[2025-06-04 14:35:14] 2025-06-04 12:30:50,642 | INFO     | did not find any defunct processes belonging to 3942533
[2025-06-04 14:35:14] 2025-06-04 12:30:50,642 | INFO     | ready for new job
[2025-06-04 14:35:14] 2025-06-04 12:30:50,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:35:14] 2025-06-04 12:30:50,644 | INFO     | **************************************
[2025-06-04 14:35:14] 2025-06-04 12:30:50,644 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:35:14] 2025-06-04 12:30:50,645 | INFO     | **************************************
[2025-06-04 14:35:14] 2025-06-04 12:30:50,645 | INFO     | 
[2025-06-04 14:35:14] 2025-06-04 12:30:50,648 | INFO     | architecture information:
[2025-06-04 14:35:14] 2025-06-04 12:30:50,649 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:35:14] 2025-06-04 12:30:50,664 | INFO     | cat /etc/os-release:
[2025-06-04 14:35:14] NAME="CentOS Linux"
[2025-06-04 14:35:14] VERSION="7 (Core)"
[2025-06-04 14:35:14] ID="centos"
[2025-06-04 14:35:14] ID_LIKE="rhel fedora"
[2025-06-04 14:35:14] VERSION_ID="7"
[2025-06-04 14:35:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:35:14] ANSI_COLOR="0;31"
[2025-06-04 14:35:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:35:14] HOME_URL="https://www.centos.org/"
[2025-06-04 14:35:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:35:14] 
[2025-06-04 14:35:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:35:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:35:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:35:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:35:14] 
[2025-06-04 14:35:14] 2025-06-04 12:30:50,665 | INFO     | **************************************
[2025-06-04 14:35:14] 2025-06-04 12:30:51,168 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-04 14:35:14] 2025-06-04 12:30:51,184 | INFO     | sufficient remaining disk space (650072031232 B)
[2025-06-04 14:35:14] 2025-06-04 12:30:51,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:35:14] 2025-06-04 12:30:51,184 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:35:14] 2025-06-04 12:30:51,184 | INFO     | update_server=False
[2025-06-04 14:35:14] 2025-06-04 12:30:51,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:35:14] 2025-06-04 12:30:51,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:35:14] 2025-06-04 12:30:51,214 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 14:35:14] 2025-06-04 12:30:51,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 14:35:14] 2025-06-04 12:30:51,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:35:14] 2025-06-04 12:30:51,215 | INFO     | will abort loop
[2025-06-04 14:35:14] 2025-06-04 12:30:51,230 | INFO     | all payload control threads have been joined
[2025-06-04 14:35:14] 2025-06-04 12:30:51,609 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:35:14] 2025-06-04 12:30:51,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:35:14] 2025-06-04 12:30:51,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:35:14] 2025-06-04 12:30:52,078 | INFO     | all data control threads have been joined
[2025-06-04 14:35:14] 2025-06-04 12:30:52,190 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,204 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,220 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,236 | INFO     | [payload] control thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,526 | INFO     | [job] validate thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,588 | INFO     | all job control threads have been joined
[2025-06-04 14:35:14] 2025-06-04 12:30:52,676 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,944 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:52,959 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:53,073 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:53,083 | INFO     | [data] control thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:53,190 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:53,477 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:53,592 | INFO     | [job] control thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:54,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:35:14] 2025-06-04 12:30:54,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:35:14] 2025-06-04 12:30:55,096 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:30:58,436 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:31:02,153 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:35:14] 2025-06-04 12:31:03,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:35:14] 2025-06-04 12:31:04,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22912079341376)>', '<ExcThread(monitor, started 22911364617984)>']
[2025-06-04 14:35:14] 2025-06-04 12:31:04,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:35:14] 2025-06-04 12:31:04,670 | INFO     | [monitor] control thread has ended
[2025-06-04 14:35:14] 2025-06-04 12:31:09,356 | INFO     | all workflow threads have been joined
[2025-06-04 14:35:14] 2025-06-04 12:31:09,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:35:14] 2025-06-04 12:31:09,356 | INFO     | traces error code: 0
[2025-06-04 14:35:14] 2025-06-04 12:31:09,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:35:14] 2025-06-04 12:31:09,530 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:35:14] 2025-06-04 12:31:09,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:35:14] 2025-06-04 12:31:09,535 [wrapper] pilotpid: 3927842
[2025-06-04 14:35:14] 2025-06-04 12:31:09,538 [wrapper] Pilot exit status: 0
[2025-06-04 14:35:14] 2025-06-04 12:31:09,549 [wrapper] pandaids: 6677380610
[2025-06-04 14:35:14] 2025-06-04 12:31:09,616 [wrapper] cleanup supervisor_pilot    3707 3927844
[2025-06-04 14:35:14] 2025-06-04 12:31:09,620 [wrapper] Test setup, not cleaning
[2025-06-04 14:35:14] 2025-06-04 12:31:09,623 [wrapper] apfmon messages muted
[2025-06-04 14:35:14] 2025-06-04 12:31:09,626 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:35:14] 2025-06-04 12:31:09,629 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:35:14]  *** Error codes and diagnostics ***
[2025-06-04 14:35:14]     "exeErrorCode": 0,
[2025-06-04 14:35:14]     "exeErrorDiag": "",
[2025-06-04 14:35:14]     "pilotErrorCode": 0,
[2025-06-04 14:35:14]     "pilotErrorDiag": "",
[2025-06-04 14:35:14]  *** Listing of results directory ***
[2025-06-04 14:35:14] total 396956
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:48 queuedata.json
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 14:35:14] -rwx------ 1 boinc boinc     37140 Jun  2 17:48 runpilot2-wrapper.sh
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:35:14] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:43 run_atlas
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:43 job.xml
[2025-06-04 14:35:14] -rw-r--r-- 2 boinc boinc 217112660 Jun  4 11:43 EVNT.45006593._000090.pool.root.1
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc      6634 Jun  4 11:43 init_data.xml
[2025-06-04 14:35:14] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 14:35:14] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:43 shared
[2025-06-04 14:35:14] -rw-r--r-- 2 boinc boinc    508872 Jun  4 11:43 input.tar.gz
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:43 boinc_lockfile
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc      2521 Jun  4 11:43 pandaJob.out
[2025-06-04 14:35:14] -rw------- 1 boinc boinc    986766 Jun  4 11:43 agis_schedconf.cvmfs.json
[2025-06-04 14:35:14] -rw------- 1 boinc boinc   1603667 Jun  4 11:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:35:14] drwx------ 4 boinc boinc      4096 Jun  4 11:44 pilot3
[2025-06-04 14:35:14] -rw------- 1 boinc boinc 183047702 Jun  4 14:29 HITS.45006595._002242.pool.root.1
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc       528 Jun  4 14:30 boinc_task_state.xml
[2025-06-04 14:35:14] -rw------- 1 boinc boinc      1046 Jun  4 14:30 memory_monitor_summary.json
[2025-06-04 14:35:14] -rw------- 1 boinc boinc    298277 Jun  4 14:30 log.45006595._002242.job.log.tgz.1
[2025-06-04 14:35:14] -rw------- 1 boinc boinc      7717 Jun  4 14:30 heartbeat.json
[2025-06-04 14:35:14] -rw------- 1 boinc boinc        95 Jun  4 14:30 pilot_heartbeat.json
[2025-06-04 14:35:14] -rw------- 1 boinc boinc      4621 Jun  4 14:31 pilotlog.txt
[2025-06-04 14:35:14] -rw------- 1 boinc boinc    945695 Jun  4 14:31 log.45006595._002242.job.log.1
[2025-06-04 14:35:14] -rw------- 1 boinc boinc       357 Jun  4 14:31 output.list
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:31 runtime_log
[2025-06-04 14:35:14] -rw------- 1 boinc boinc   1259520 Jun  4 14:31 result.tar.gz
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc      9026 Jun  4 14:31 runtime_log.err
[2025-06-04 14:35:14] -rw------- 1 boinc boinc       664 Jun  4 14:31 gQCMDm4ZMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0xeKDmhKO0zn.diag
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc        26 Jun  4 14:35 wrapper_checkpoint.txt
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:35 boinc_mmap_file
[2025-06-04 14:35:14] -rw-r--r-- 1 boinc boinc     20576 Jun  4 14:35 stderr.txt
[2025-06-04 14:35:14] HITS file was successfully produced:
[2025-06-04 14:35:14] -rw------- 1 boinc boinc 183047702 Jun  4 14:29 shared/HITS.pool.root.1
[2025-06-04 14:35:14]  *** Contents of shared directory: ***
[2025-06-04 14:35:14] total 392544
[2025-06-04 14:35:14] -rw-r--r-- 2 boinc boinc 217112660 Jun  4 11:43 ATLAS.root_0
[2025-06-04 14:35:14] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 14:35:14] -rw-r--r-- 2 boinc boinc    508872 Jun  4 11:43 input.tar.gz
[2025-06-04 14:35:14] -rw------- 1 boinc boinc 183047702 Jun  4 14:29 HITS.pool.root.1
[2025-06-04 14:35:14] -rw------- 1 boinc boinc   1259520 Jun  4 14:31 result.tar.gz
14:35:16 (3921632): run_atlas exited; CPU time 38427.285429
14:35:16 (3921632): called boinc_finish(0)

</stderr_txt>
]]>

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