Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:48:41 (988144): wrapper (7.7.26015): starting
22:48:41 (988144): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 22:48:41] Arguments: --nthreads 4
[2025-06-04 22:48:41] Threads: 4
[2025-06-04 22:48:41] Checking for CVMFS
[2025-06-04 22:48:41] No cvmfs_config command found, will try listing directly
[2025-06-04 22:48:41] CVMFS is ok
[2025-06-04 22:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:48:41] Further information can be found at the LHC@home message board.
[2025-06-04 22:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:48:41] Checking for apptainer binary...
[2025-06-04 22:48:41] which: no apptainer in ((null))
[2025-06-04 22:48:41] apptainer is not installed, using version from CVMFS
[2025-06-04 22:48:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:48:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-04 22:48:41] apptainer works
[2025-06-04 22:48:41] Set ATHENA_PROC_NUMBER=4
[2025-06-04 22:48:41] Set ATHENA_CORE_NUMBER=4
[2025-06-04 22:48:41] Starting ATLAS job with PandaID=6677376814
[2025-06-04 22:48:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:46:36]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:46:36] 2025-06-04 23:46:16,769 | INFO     | executing command: lscpu
[2025-06-05 01:46:36] 2025-06-04 23:46:16,836 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:46:36] 2025-06-04 23:46:17,166 | INFO     | monitor loop #774: job 0:6677376814 is in state 'finished'
[2025-06-05 01:46:36] 2025-06-04 23:46:17,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:46:36] 2025-06-04 23:46:19,676 | INFO     | monitor loop #775: job 0:6677376814 is in state 'finished'
[2025-06-05 01:46:36] 2025-06-04 23:46:19,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,115 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 01:46:36] 2025-06-04 23:46:21,116 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677376814/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,116 | INFO     | extracted standard info from prmon json
[2025-06-05 01:46:36] 2025-06-04 23:46:21,116 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:46:36] 2025-06-04 23:46:21,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:46:36] 2025-06-04 23:46:21,117 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:46:36] 2025-06-04 23:46:21,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:46:36] 2025-06-04 23:46:21,119 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:46:36] 2025-06-04 23:46:21,120 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 01:46:36] 2025-06-04 23:46:21,120 | INFO     | sum of deviations: 18524165728.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,120 | INFO     | mean x: 1749075440.5
[2025-06-05 01:46:36] 2025-06-04 23:46:21,120 | INFO     | mean y: 2313505.436781609
[2025-06-05 01:46:36] 2025-06-04 23:46:21,120 | INFO     | -- intersect: -19832831303.267323
[2025-06-05 01:46:36] 2025-06-04 23:46:21,120 | INFO     | intersect: -19832831303.267323
[2025-06-05 01:46:36] 2025-06-04 23:46:21,121 | INFO     | chi2: 1.6246184112293476
[2025-06-05 01:46:36] 2025-06-04 23:46:21,121 | INFO     | sum of square deviations: 1496660620.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,121 | INFO     | sum of deviations: 17839640198.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | mean x: 1749075288.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | mean y: 2312742.449704142
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | -- intersect: -20846016798.774696
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | intersect: -20846016798.774696
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | chi2: 1.6261802993620669
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | current chi2=1.6261802993620669 (change=-0.09613876845932158 %)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | right removable region: 168
[2025-06-05 01:46:36] 2025-06-04 23:46:21,122 | INFO     | sum of square deviations: 1496660620.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | sum of deviations: -7878403576.999999
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | mean x: 1749075593.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | mean y: 2342566.278106509
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | -- intersect: 9209455537.777681
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | intersect: 9209455537.777681
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | chi2: 0.04152619710637312
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | current chi2=0.04152619710637312 (change=97.4439414930088 %)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,123 | INFO     | sum of square deviations: 1367709365.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,124 | INFO     | sum of deviations: -5729015537.499999
[2025-06-05 01:46:36] 2025-06-04 23:46:21,124 | INFO     | mean x: 1749075745.5
[2025-06-05 01:46:36] 2025-06-04 23:46:21,124 | INFO     | mean y: 2339991.5426829266
[2025-06-05 01:46:36] 2025-06-04 23:46:21,124 | INFO     | -- intersect: 7328810350.42181
[2025-06-05 01:46:36] 2025-06-04 23:46:21,124 | INFO     | intersect: 7328810350.42181
[2025-06-05 01:46:36] 2025-06-04 23:46:21,124 | INFO     | chi2: 0.033914053066650775
[2025-06-05 01:46:36] 2025-06-04 23:46:21,125 | INFO     | current chi2=0.033914053066650775 (change=18.330944247611086 %)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,125 | INFO     | left removable region: 20
[2025-06-05 01:46:36] 2025-06-04 23:46:21,125 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,126 | INFO     | sum of deviations: -403163792.49999964
[2025-06-05 01:46:36] 2025-06-04 23:46:21,126 | INFO     | mean x: 1749075867.5
[2025-06-05 01:46:36] 2025-06-04 23:46:21,126 | INFO     | mean y: 2332602.777027027
[2025-06-05 01:46:36] 2025-06-04 23:46:21,127 | INFO     | -- intersect: 703862892.4294091
[2025-06-05 01:46:36] 2025-06-04 23:46:21,127 | INFO     | intersect: 703862892.4294091
[2025-06-05 01:46:36] 2025-06-04 23:46:21,127 | INFO     | chi2: 0.014782748115590867
[2025-06-05 01:46:36] 2025-06-04 23:46:21,127 | INFO     | -- intersect: 703862892.4294091
[2025-06-05 01:46:36] 2025-06-04 23:46:21,127 | INFO     | current memory leak: -0.40 B/s (using 148 data points, chi2=0.01)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,128 | INFO     | ..............................
[2025-06-05 01:46:36] 2025-06-04 23:46:21,128 | INFO     | . Timing measurements:
[2025-06-05 01:46:36] 2025-06-04 23:46:21,128 | INFO     | . get job = 0 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,128 | INFO     | . initial setup = 1 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,128 | INFO     | . payload setup = 8 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,128 | INFO     | . stage-in = 0 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,129 | INFO     | . payload execution = 10607 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,129 | INFO     | . stage-out = 1 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,129 | INFO     | . log creation = 0 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,129 | INFO     | ..............................
[2025-06-05 01:46:36] 2025-06-04 23:46:21,422 | INFO     | 
[2025-06-05 01:46:36] 2025-06-04 23:46:21,422 | INFO     | job summary report
[2025-06-05 01:46:36] 2025-06-04 23:46:21,422 | INFO     | --------------------------------------------------
[2025-06-05 01:46:36] 2025-06-04 23:46:21,422 | INFO     | PanDA job id: 6677376814
[2025-06-05 01:46:36] 2025-06-04 23:46:21,422 | INFO     | task id: 45006595
[2025-06-05 01:46:36] 2025-06-04 23:46:21,422 | INFO     | errors: (none)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | pilot state: finished 
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | transexitcode: 0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | exeerrorcode: 0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | exeerrordiag: 
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | exitcode: 0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | exitmsg: OK
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | cpuconsumptiontime: 40556 s
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | nevents: 400
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | neventsw: 0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | pid: 999239
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | pgrp: 999239
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | corecount: 4
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | event service: False
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | sizes: {0: 2397227, 1: 2397369, 6: 2397575, 11: 2397603, 10619: 2426109, 10621: 2435072, 10623: 2435256, 10630: 2435426}
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | --------------------------------------------------
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | 
[2025-06-05 01:46:36] 2025-06-04 23:46:21,423 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-05 01:46:36] 2025-06-04 23:46:21,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | job 6677376814 has completed (purged errors)
[2025-06-05 01:46:36] 2025-06-04 23:46:21,446 | INFO     | overall cleanup function is called
[2025-06-05 01:46:36] 2025-06-04 23:46:22,454 | INFO     | --- collectZombieJob: --- 10, [999239]
[2025-06-05 01:46:36] 2025-06-04 23:46:22,454 | INFO     | zombie collector waiting for pid 999239
[2025-06-05 01:46:36] 2025-06-04 23:46:22,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:46:36] 2025-06-04 23:46:22,455 | INFO     | collected zombie processes
[2025-06-05 01:46:36] 2025-06-04 23:46:22,455 | INFO     | will attempt to kill all subprocesses of pid=999239
[2025-06-05 01:46:36] 2025-06-04 23:46:22,797 | INFO     | process IDs to be killed: [999239] (in reverse order)
[2025-06-05 01:46:36] 2025-06-04 23:46:22,907 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:46:36] 2025-06-04 23:46:22,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:46:36] 2025-06-04 23:46:22,919 | INFO     | did not find any defunct processes belonging to 999239
[2025-06-05 01:46:36] 2025-06-04 23:46:22,930 | INFO     | did not find any defunct processes belonging to 999239
[2025-06-05 01:46:36] 2025-06-04 23:46:22,931 | INFO     | ready for new job
[2025-06-05 01:46:36] 2025-06-04 23:46:22,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:46:36] 2025-06-04 23:46:22,933 | INFO     | **************************************
[2025-06-05 01:46:36] 2025-06-04 23:46:22,933 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:46:36] 2025-06-04 23:46:22,933 | INFO     | **************************************
[2025-06-05 01:46:36] 2025-06-04 23:46:22,933 | INFO     | 
[2025-06-05 01:46:36] 2025-06-04 23:46:22,937 | INFO     | architecture information:
[2025-06-05 01:46:36] 2025-06-04 23:46:22,938 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:46:36] 2025-06-04 23:46:22,953 | INFO     | cat /etc/os-release:
[2025-06-05 01:46:36] NAME="CentOS Linux"
[2025-06-05 01:46:36] VERSION="7 (Core)"
[2025-06-05 01:46:36] ID="centos"
[2025-06-05 01:46:36] ID_LIKE="rhel fedora"
[2025-06-05 01:46:36] VERSION_ID="7"
[2025-06-05 01:46:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:46:36] ANSI_COLOR="0;31"
[2025-06-05 01:46:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:46:36] HOME_URL="https://www.centos.org/"
[2025-06-05 01:46:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:46:36] 
[2025-06-05 01:46:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:46:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:46:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:46:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:46:36] 
[2025-06-05 01:46:36] 2025-06-04 23:46:22,953 | INFO     | **************************************
[2025-06-05 01:46:36] 2025-06-04 23:46:23,455 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-05 01:46:36] 2025-06-04 23:46:23,474 | INFO     | sufficient remaining disk space (656441081856 B)
[2025-06-05 01:46:36] 2025-06-04 23:46:23,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:46:36] 2025-06-04 23:46:23,475 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:46:36] 2025-06-04 23:46:23,475 | INFO     | update_server=False
[2025-06-05 01:46:36] 2025-06-04 23:46:23,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:46:36] 2025-06-04 23:46:23,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:46:36] 2025-06-04 23:46:23,476 | INFO     | aborting loop
[2025-06-05 01:46:36] 2025-06-04 23:46:23,698 | INFO     | all data control threads have been joined
[2025-06-05 01:46:36] 2025-06-04 23:46:23,799 | INFO     | all job control threads have been joined
[2025-06-05 01:46:36] 2025-06-04 23:46:24,349 | INFO     | PID=992174 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:46:36] 2025-06-04 23:46:24,349 | INFO     | .. there are 7 such processes running
[2025-06-05 01:46:36] 2025-06-04 23:46:24,349 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:46:36] 2025-06-04 23:46:24,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:46:36] 2025-06-04 23:46:24,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:46:36] 2025-06-04 23:46:24,481 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:24,481 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:24,703 | INFO     | [data] control thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:24,802 | INFO     | [job] control thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:24,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:46:36] 2025-06-04 23:46:24,825 | INFO     | all payload control threads have been joined
[2025-06-05 01:46:36] 2025-06-04 23:46:24,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:46:36] 2025-06-04 23:46:25,043 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,372 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,404 | INFO     | [job] validate thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,616 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,827 | INFO     | [payload] control thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,851 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,853 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:25,867 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:26,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:46:36] 2025-06-04 23:46:26,819 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:27,252 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:28,841 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:46:36] 2025-06-04 23:46:29,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22618158040896)>', '<ExcThread(monitor, started 22617918502656)>']
[2025-06-05 01:46:36] 2025-06-04 23:46:30,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:46:36] 2025-06-04 23:46:30,379 | INFO     | [monitor] control thread has ended
[2025-06-05 01:46:36] 2025-06-04 23:46:34,948 | INFO     | all workflow threads have been joined
[2025-06-05 01:46:36] 2025-06-04 23:46:34,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:46:36] 2025-06-04 23:46:34,949 | INFO     | traces error code: 0
[2025-06-05 01:46:36] 2025-06-04 23:46:34,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:46:36] 2025-06-04 23:46:35,127 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:46:36] 2025-06-04 23:46:35,130 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:46:36] 2025-06-04 23:46:35,134 [wrapper] pilotpid: 992174
[2025-06-05 01:46:36] 2025-06-04 23:46:35,137 [wrapper] Pilot exit status: 0
[2025-06-05 01:46:36] 2025-06-04 23:46:35,148 [wrapper] pandaids: 6677376814
[2025-06-05 01:46:36] 2025-06-04 23:46:35,224 [wrapper] cleanup supervisor_pilot 1332027 992175
[2025-06-05 01:46:36] 2025-06-04 23:46:35,227 [wrapper] Test setup, not cleaning
[2025-06-05 01:46:36] 2025-06-04 23:46:35,230 [wrapper] apfmon messages muted
[2025-06-05 01:46:36] 2025-06-04 23:46:35,234 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:46:36] 2025-06-04 23:46:35,237 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:46:36]  *** Error codes and diagnostics ***
[2025-06-05 01:46:36]     "exeErrorCode": 0,
[2025-06-05 01:46:36]     "exeErrorDiag": "",
[2025-06-05 01:46:36]     "pilotErrorCode": 0,
[2025-06-05 01:46:36]     "pilotErrorDiag": "",
[2025-06-05 01:46:36]  *** Listing of results directory ***
[2025-06-05 01:46:36] total 399004
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-05 01:46:36] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:46:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:48 run_atlas
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:48 job.xml
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc      6636 Jun  4 22:48 init_data.xml
[2025-06-05 01:46:36] -rw-r--r-- 2 boinc boinc 216637637 Jun  4 22:48 EVNT.45006593._000021.pool.root.1
[2025-06-05 01:46:36] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:48 start_atlas.sh
[2025-06-05 01:46:36] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:48 shared
[2025-06-05 01:46:36] -rw-r--r-- 2 boinc boinc    508877 Jun  4 22:48 input.tar.gz
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:48 boinc_lockfile
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc      2519 Jun  4 22:48 pandaJob.out
[2025-06-05 01:46:36] -rw------- 1 boinc boinc    987032 Jun  4 22:48 agis_schedconf.cvmfs.json
[2025-06-05 01:46:36] -rw------- 1 boinc boinc   1598969 Jun  4 22:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:46:36] drwx------ 4 boinc boinc      4096 Jun  4 22:48 pilot3
[2025-06-05 01:46:36] -rw------- 1 boinc boinc 185501376 Jun  5 01:45 HITS.45006595._000521.pool.root.1
[2025-06-05 01:46:36] -rw------- 1 boinc boinc        95 Jun  5 01:45 pilot_heartbeat.json
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:45 boinc_task_state.xml
[2025-06-05 01:46:36] -rw------- 1 boinc boinc      1035 Jun  5 01:46 memory_monitor_summary.json
[2025-06-05 01:46:36] -rw------- 1 boinc boinc    310603 Jun  5 01:46 log.45006595._000521.job.log.tgz.1
[2025-06-05 01:46:36] -rw------- 1 boinc boinc      7720 Jun  5 01:46 heartbeat.json
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:46 wrapper_checkpoint.txt
[2025-06-05 01:46:36] -rw------- 1 boinc boinc      4757 Jun  5 01:46 pilotlog.txt
[2025-06-05 01:46:36] -rw------- 1 boinc boinc    994382 Jun  5 01:46 log.45006595._000521.job.log.1
[2025-06-05 01:46:36] -rw------- 1 boinc boinc       357 Jun  5 01:46 output.list
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:46 runtime_log
[2025-06-05 01:46:36] -rw------- 1 boinc boinc   1320960 Jun  5 01:46 result.tar.gz
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc      9026 Jun  5 01:46 runtime_log.err
[2025-06-05 01:46:36] -rw------- 1 boinc boinc       665 Jun  5 01:46 AADODmjaMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPVVKDmNMolRm.diag
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:46 boinc_mmap_file
[2025-06-05 01:46:36] -rw-r--r-- 1 boinc boinc     20996 Jun  5 01:46 stderr.txt
[2025-06-05 01:46:36] HITS file was successfully produced:
[2025-06-05 01:46:36] -rw------- 1 boinc boinc 185501376 Jun  5 01:45 shared/HITS.pool.root.1
[2025-06-05 01:46:36]  *** Contents of shared directory: ***
[2025-06-05 01:46:36] total 394536
[2025-06-05 01:46:36] -rw-r--r-- 2 boinc boinc 216637637 Jun  4 22:48 ATLAS.root_0
[2025-06-05 01:46:36] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:48 start_atlas.sh
[2025-06-05 01:46:36] -rw-r--r-- 2 boinc boinc    508877 Jun  4 22:48 input.tar.gz
[2025-06-05 01:46:36] -rw------- 1 boinc boinc 185501376 Jun  5 01:45 HITS.pool.root.1
[2025-06-05 01:46:36] -rw------- 1 boinc boinc   1320960 Jun  5 01:46 result.tar.gz
01:46:38 (988144): run_atlas exited; CPU time 40974.255596
01:46:38 (988144): called boinc_finish(0)

</stderr_txt>
]]>

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