Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:40 (2477): wrapper (7.7.26015): starting
21:58:40 (2477): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 21:58:40] Arguments: --nthreads 8
[2025-06-02 21:58:40] Threads: 8
[2025-06-02 21:58:40] Checking for CVMFS
[2025-06-02 21:58:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 21:58:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 21:58:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 21:58:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 21:58:41] 2.11.2.0 29033 30794 91656 146717 1 155 14164353 25165824 4097 130560 0 16325253 99.801 18107030 2030 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 21:58:41] CVMFS is ok
[2025-06-02 21:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 21:58:41] Checking for apptainer binary...
[2025-06-02 21:58:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 21:58:41] Running /usr/bin/apptainer --version
[2025-06-02 21:58:41] apptainer version 1.3.2-1.el7
[2025-06-02 21:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 21:58:42] cg-vwn393.simple-grid.lan
[2025-06-02 21:58:42] apptainer works
[2025-06-02 21:58:42] Set ATHENA_PROC_NUMBER=8
[2025-06-02 21:58:42] Set ATHENA_CORE_NUMBER=8
[2025-06-02 21:58:42] Starting ATLAS job with PandaID=6677380549
[2025-06-02 21:58:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 01:32:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 01:32:08] 2025-06-02 23:31:51,458 | INFO     | mean x: 1748901024.5
[2025-06-03 01:32:08] 2025-06-02 23:31:51,458 | INFO     | mean y: 2499966.4393939395
[2025-06-03 01:32:08] 2025-06-02 23:31:51,458 | INFO     | -- intersect: 3833727877.6525564
[2025-06-03 01:32:08] 2025-06-02 23:31:51,458 | INFO     | intersect: 3833727877.6525564
[2025-06-03 01:32:08] 2025-06-02 23:31:51,459 | INFO     | chi2: 0.06578164477450417
[2025-06-03 01:32:08] 2025-06-02 23:31:51,459 | INFO     | current chi2=0.06578164477450417 (change=25.646554063651884 %)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,459 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,461 | INFO     | sum of deviations: 1828419307.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,461 | INFO     | mean x: 1748901177.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,461 | INFO     | mean y: 2493872.1243523317
[2025-06-03 01:32:08] 2025-06-02 23:31:51,461 | INFO     | -- intersect: -1432012153.8570454
[2025-06-03 01:32:08] 2025-06-02 23:31:51,461 | INFO     | intersect: -1432012153.8570454
[2025-06-03 01:32:08] 2025-06-02 23:31:51,462 | INFO     | chi2: 0.022790444740444435
[2025-06-03 01:32:08] 2025-06-02 23:31:51,462 | INFO     | current chi2=0.022790444740444435 (change=65.35440118809917 %)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,462 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,463 | INFO     | sum of deviations: 4167757107.0000014
[2025-06-03 01:32:08] 2025-06-02 23:31:51,464 | INFO     | mean x: 1748901329.5
[2025-06-03 01:32:08] 2025-06-02 23:31:51,464 | INFO     | mean y: 2491805.6170212766
[2025-06-03 01:32:08] 2025-06-02 23:31:51,464 | INFO     | -- intersect: -3535265404.110069
[2025-06-03 01:32:08] 2025-06-02 23:31:51,464 | INFO     | intersect: -3535265404.110069
[2025-06-03 01:32:08] 2025-06-02 23:31:51,464 | INFO     | chi2: 0.0005802206860055815
[2025-06-03 01:32:08] 2025-06-02 23:31:51,464 | INFO     | current chi2=0.0005802206860055815 (change=97.45410547001784 %)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,465 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,466 | INFO     | sum of deviations: 3400189471.0000024
[2025-06-03 01:32:08] 2025-06-02 23:31:51,466 | INFO     | mean x: 1748901482.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,467 | INFO     | mean y: 2492536.0655737706
[2025-06-03 01:32:08] 2025-06-02 23:31:51,467 | INFO     | -- intersect: -3126825759.7197137
[2025-06-03 01:32:08] 2025-06-02 23:31:51,467 | INFO     | intersect: -3126825759.7197137
[2025-06-03 01:32:08] 2025-06-02 23:31:51,467 | INFO     | chi2: 0.00035583115286682806
[2025-06-03 01:32:08] 2025-06-02 23:31:51,467 | INFO     | current chi2=0.00035583115286682806 (change=38.67313567937751 %)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,468 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 01:32:08] 2025-06-02 23:31:51,469 | INFO     | sum of deviations: 2720308908.000001
[2025-06-03 01:32:08] 2025-06-02 23:31:51,469 | INFO     | mean x: 1748901634.5
[2025-06-03 01:32:08] 2025-06-02 23:31:51,469 | INFO     | mean y: 2493219.966292135
[2025-06-03 01:32:08] 2025-06-02 23:31:51,470 | INFO     | -- intersect: -2718070383.821089
[2025-06-03 01:32:08] 2025-06-02 23:31:51,470 | INFO     | intersect: -2718070383.821089
[2025-06-03 01:32:08] 2025-06-02 23:31:51,470 | INFO     | chi2: 0.00016156531145568922
[2025-06-03 01:32:08] 2025-06-02 23:31:51,470 | INFO     | current chi2=0.00016156531145568922 (change=54.59495039880446 %)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,470 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,472 | INFO     | sum of deviations: 2359595290.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,472 | INFO     | mean x: 1748901787.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,472 | INFO     | mean y: 2493603.3352601156
[2025-06-03 01:32:08] 2025-06-02 23:31:51,472 | INFO     | -- intersect: -2567906439.703214
[2025-06-03 01:32:08] 2025-06-02 23:31:51,472 | INFO     | intersect: -2567906439.703214
[2025-06-03 01:32:08] 2025-06-02 23:31:51,472 | INFO     | chi2: 0.00013665145490476347
[2025-06-03 01:32:08] 2025-06-02 23:31:51,473 | INFO     | current chi2=0.00013665145490476347 (change=15.42030051281064 %)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,473 | INFO     | left removable region: 70
[2025-06-03 01:32:08] 2025-06-02 23:31:51,473 | INFO     | sum of square deviations: 713140813.0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,474 | INFO     | sum of deviations: 813142230.5000001
[2025-06-03 01:32:08] 2025-06-02 23:31:51,474 | INFO     | mean x: 1748902671.5
[2025-06-03 01:32:08] 2025-06-02 23:31:51,474 | INFO     | mean y: 2495519.946969697
[2025-06-03 01:32:08] 2025-06-02 23:31:51,474 | INFO     | -- intersect: -1991650086.7929983
[2025-06-03 01:32:08] 2025-06-02 23:31:51,475 | INFO     | intersect: -1991650086.7929983
[2025-06-03 01:32:08] 2025-06-02 23:31:51,475 | INFO     | chi2: 8.392907904464796e-05
[2025-06-03 01:32:08] 2025-06-02 23:31:51,475 | INFO     | -- intersect: -1991650086.7929983
[2025-06-03 01:32:08] 2025-06-02 23:31:51,475 | INFO     | current memory leak: 1.14 B/s (using 132 data points, chi2=0.00)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,476 | INFO     | ..............................
[2025-06-03 01:32:08] 2025-06-02 23:31:51,476 | INFO     | . Timing measurements:
[2025-06-03 01:32:08] 2025-06-02 23:31:51,476 | INFO     | . get job = 0 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | . initial setup = 2 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | . payload setup = 16 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | . stage-in = 0 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | . payload execution = 12706 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | . stage-out = 2 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | . log creation = 0 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,477 | INFO     | ..............................
[2025-06-03 01:32:08] 2025-06-02 23:31:51,978 | INFO     | 
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | job summary report
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | --------------------------------------------------
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | PanDA job id: 6677380549
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | task id: 45006595
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | errors: (none)
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | pilot state: finished 
[2025-06-03 01:32:08] 2025-06-02 23:31:51,979 | INFO     | transexitcode: 0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | exeerrorcode: 0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | exeerrordiag: 
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | exitcode: 0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | exitmsg: OK
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | cpuconsumptiontime: 48229 s
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | nevents: 400
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | neventsw: 0
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | pid: 14737
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | pgrp: 14737
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | corecount: 8
[2025-06-03 01:32:08] 2025-06-02 23:31:51,980 | INFO     | event service: False
[2025-06-03 01:32:08] 2025-06-02 23:31:51,981 | INFO     | sizes: {0: 2405005, 1: 2405204, 12: 2405438, 12727: 2434590, 12728: 2434589, 12730: 2443586, 12732: 2443770, 12746: 2443940}
[2025-06-03 01:32:08] 2025-06-02 23:31:51,981 | INFO     | --------------------------------------------------
[2025-06-03 01:32:08] 2025-06-02 23:31:51,981 | INFO     | 
[2025-06-03 01:32:08] 2025-06-02 23:31:51,981 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 01:32:08] 2025-06-02 23:31:52,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | job 6677380549 has completed (purged errors)
[2025-06-03 01:32:08] 2025-06-02 23:31:52,021 | INFO     | overall cleanup function is called
[2025-06-03 01:32:08] 2025-06-02 23:31:53,031 | INFO     | --- collectZombieJob: --- 10, [14737]
[2025-06-03 01:32:08] 2025-06-02 23:31:53,031 | INFO     | zombie collector waiting for pid 14737
[2025-06-03 01:32:08] 2025-06-02 23:31:53,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 01:32:08] 2025-06-02 23:31:53,031 | INFO     | collected zombie processes
[2025-06-03 01:32:08] 2025-06-02 23:31:53,032 | INFO     | will attempt to kill all subprocesses of pid=14737
[2025-06-03 01:32:08] 2025-06-02 23:31:53,125 | INFO     | process IDs to be killed: [14737] (in reverse order)
[2025-06-03 01:32:08] 2025-06-02 23:31:53,212 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 01:32:08] 2025-06-02 23:31:53,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 01:32:08] 2025-06-02 23:31:53,216 | INFO     | did not find any defunct processes belonging to 14737
[2025-06-03 01:32:08] 2025-06-02 23:31:53,220 | INFO     | did not find any defunct processes belonging to 14737
[2025-06-03 01:32:08] 2025-06-02 23:31:53,221 | INFO     | ready for new job
[2025-06-03 01:32:08] 2025-06-02 23:31:53,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 01:32:08] 2025-06-02 23:31:53,223 | INFO     | **************************************
[2025-06-03 01:32:08] 2025-06-02 23:31:53,223 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 01:32:08] 2025-06-02 23:31:53,223 | INFO     | **************************************
[2025-06-03 01:32:08] 2025-06-02 23:31:53,223 | INFO     | 
[2025-06-03 01:32:08] 2025-06-02 23:31:53,224 | INFO     | pilot is running in a VM
[2025-06-03 01:32:08] 2025-06-02 23:31:53,224 | INFO     | architecture information:
[2025-06-03 01:32:08] 2025-06-02 23:31:53,225 | INFO     | executing command: cat /etc/os-release
[2025-06-03 01:32:08] 2025-06-02 23:31:53,259 | INFO     | cat /etc/os-release:
[2025-06-03 01:32:08] NAME="CentOS Linux"
[2025-06-03 01:32:08] VERSION="7 (Core)"
[2025-06-03 01:32:08] ID="centos"
[2025-06-03 01:32:08] ID_LIKE="rhel fedora"
[2025-06-03 01:32:08] VERSION_ID="7"
[2025-06-03 01:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 01:32:08] ANSI_COLOR="0;31"
[2025-06-03 01:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 01:32:08] HOME_URL="https://www.centos.org/"
[2025-06-03 01:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 01:32:08] 
[2025-06-03 01:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 01:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 01:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 01:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 01:32:08] 
[2025-06-03 01:32:08] 2025-06-02 23:31:53,259 | INFO     | **************************************
[2025-06-03 01:32:08] 2025-06-02 23:31:53,761 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 01:32:08] 2025-06-02 23:31:53,802 | INFO     | sufficient remaining disk space (497061724160 B)
[2025-06-03 01:32:08] 2025-06-02 23:31:53,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 01:32:08] 2025-06-02 23:31:53,803 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 01:32:08] 2025-06-02 23:31:53,803 | INFO     | update_server=False
[2025-06-03 01:32:08] 2025-06-02 23:31:53,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 01:32:08] 2025-06-02 23:31:53,803 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 01:32:08] 2025-06-02 23:31:53,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:32:08] 2025-06-02 23:31:53,808 | INFO     | aborting loop
[2025-06-03 01:32:08] 2025-06-02 23:31:53,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 01:32:08] 2025-06-02 23:31:53,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 01:32:08] 2025-06-02 23:31:53,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 01:32:08] 2025-06-02 23:31:53,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 01:32:08] 2025-06-02 23:31:54,445 | INFO     | all payload control threads have been joined
[2025-06-03 01:32:08] 2025-06-02 23:31:54,542 | INFO     | all data control threads have been joined
[2025-06-03 01:32:08] 2025-06-02 23:31:54,603 | INFO     | all job control threads have been joined
[2025-06-03 01:32:08] 2025-06-02 23:31:54,809 | INFO     | [job] retrieve thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:54,815 | INFO     | [job] job monitor thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:54,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,115 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,452 | INFO     | [payload] control thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,549 | INFO     | [data] control thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,609 | INFO     | [job] control thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,615 | INFO     | [payload] validate_post thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,767 | INFO     | [job] validate thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,790 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,908 | INFO     | [data] copytool_out thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:55,908 | INFO     | [payload] failed_post thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:56,215 | INFO     | [data] copytool_in thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:56,240 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:31:56,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:32:08] 2025-06-02 23:31:57,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 01:32:08] 2025-06-02 23:31:57,632 | INFO     | [job] queue monitor thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:32:01,256 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 01:32:08] 2025-06-02 23:32:02,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952559830848)>', '<ExcThread(monitor, started 139952264288000)>']
[2025-06-03 01:32:08] 2025-06-02 23:32:03,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 01:32:08] 2025-06-02 23:32:03,861 | INFO     | [monitor] control thread has ended
[2025-06-03 01:32:08] 2025-06-02 23:32:08,015 | INFO     | all workflow threads have been joined
[2025-06-03 01:32:08] 2025-06-02 23:32:08,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 01:32:08] 2025-06-02 23:32:08,016 | INFO     | traces error code: 0
[2025-06-03 01:32:08] 2025-06-02 23:32:08,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 01:32:08] 2025-06-02 23:32:08,357 [wrapper] ==== pilot stdout END ====
[2025-06-03 01:32:08] 2025-06-02 23:32:08,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 01:32:08] 2025-06-02 23:32:08,456 [wrapper] pilotpid: 6188
[2025-06-03 01:32:08] 2025-06-02 23:32:08,478 [wrapper] Pilot exit status: 0
[2025-06-03 01:32:08] 2025-06-02 23:32:08,565 [wrapper] pandaids: 6677380549
[2025-06-03 01:32:08] 2025-06-02 23:32:08,613 [wrapper] cleanup supervisor_pilot  5906 6189
[2025-06-03 01:32:08] 2025-06-02 23:32:08,620 [wrapper] Test setup, not cleaning
[2025-06-03 01:32:08] 2025-06-02 23:32:08,626 [wrapper] apfmon messages muted
[2025-06-03 01:32:08] 2025-06-02 23:32:08,632 [wrapper] ==== wrapper stdout END ====
[2025-06-03 01:32:08] 2025-06-02 23:32:08,638 [wrapper] ==== wrapper stderr END ====
[2025-06-03 01:32:08]  *** Error codes and diagnostics ***
[2025-06-03 01:32:08]     "exeErrorCode": 0,
[2025-06-03 01:32:08]     "exeErrorDiag": "",
[2025-06-03 01:32:08]     "pilotErrorCode": 0,
[2025-06-03 01:32:08]     "pilotErrorDiag": "",
[2025-06-03 01:32:08]  *** Listing of results directory ***
[2025-06-03 01:32:08] total 390704
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:48 queuedata.json
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 01:32:08] -rwx------. 1 boinc boinc     37140 Jun  2 17:48 runpilot2-wrapper.sh
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc       100 Jun  2 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 01:32:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 21:58 run_atlas
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc       105 Jun  2 21:58 job.xml
[2025-06-03 01:32:08] -rw-r--r--. 2 boinc boinc 216484172 Jun  2 21:58 EVNT.45006593._000088.pool.root.1
[2025-06-03 01:32:08] drwxrwx--x. 2 boinc boinc        68 Jun  2 21:58 shared
[2025-06-03 01:32:08] -rw-r--r--. 2 boinc boinc    508870 Jun  2 21:58 input.tar.gz
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc      6392 Jun  2 21:58 init_data.xml
[2025-06-03 01:32:08] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:58 start_atlas.sh
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc         0 Jun  2 21:58 boinc_lockfile
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc      2521 Jun  2 21:58 pandaJob.out
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc    988356 Jun  2 21:59 agis_schedconf.cvmfs.json
[2025-06-03 01:32:08] drwx------. 4 boinc boinc      4096 Jun  2 21:59 pilot3
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc 176823243 Jun  3 01:30 HITS.45006595._002181.pool.root.1
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc        95 Jun  3 01:31 pilot_heartbeat.json
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc       531 Jun  3 01:31 boinc_task_state.xml
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc      1030 Jun  3 01:31 memory_monitor_summary.json
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc   1603667 Jun  3 01:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc    363696 Jun  3 01:31 log.45006595._002181.job.log.tgz.1
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc      8192 Jun  3 01:31 boinc_mmap_file
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc        28 Jun  3 01:31 wrapper_checkpoint.txt
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc      7680 Jun  3 01:31 heartbeat.json
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc      4539 Jun  3 01:32 pilotlog.txt
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc   1112344 Jun  3 01:32 log.45006595._002181.job.log.1
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc       357 Jun  3 01:32 output.list
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc       620 Jun  3 01:32 runtime_log
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc   1495040 Jun  3 01:32 result.tar.gz
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc       656 Jun  3 01:32 uMcLDm4ZMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTxeKDm5lIbzn.diag
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc      8659 Jun  3 01:32 runtime_log.err
[2025-06-03 01:32:08] -rw-r--r--. 1 boinc boinc     20506 Jun  3 01:32 stderr.txt
[2025-06-03 01:32:08] HITS file was successfully produced:
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc 176823243 Jun  3 01:30 shared/HITS.pool.root.1
[2025-06-03 01:32:08]  *** Contents of shared directory: ***
[2025-06-03 01:32:08] total 386068
[2025-06-03 01:32:08] -rw-r--r--. 2 boinc boinc 216484172 Jun  2 21:58 ATLAS.root_0
[2025-06-03 01:32:08] -rw-r--r--. 2 boinc boinc    508870 Jun  2 21:58 input.tar.gz
[2025-06-03 01:32:08] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:58 start_atlas.sh
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc 176823243 Jun  3 01:30 HITS.pool.root.1
[2025-06-03 01:32:08] -rw-------. 1 boinc boinc   1495040 Jun  3 01:32 result.tar.gz
01:32:09 (2477): run_atlas exited; CPU time 48387.208780
01:32:09 (2477): called boinc_finish(0)

</stderr_txt>
]]>

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