Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-02 17:51:59 (7280): Detected: vboxwrapper 26206
2025-06-02 17:51:59 (7280): Detected: BOINC client v8.0.2
2025-06-02 17:52:01 (7280): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-02 17:52:01 (7280): Successfully copied 'init_data.xml' to the shared directory.
2025-06-02 17:52:02 (7280): Create VM. (boinc_1894ee9b411de929, slot#0)
2025-06-02 17:52:03 (7280): Setting Memory Size for VM. (4400MB)
2025-06-02 17:52:04 (7280): Setting CPU Count for VM. (4)
2025-06-02 17:52:05 (7280): Setting Chipset Options for VM.
2025-06-02 17:52:05 (7280): Setting Graphics Controller Options for VM.
2025-06-02 17:52:06 (7280): Setting Boot Options for VM.
2025-06-02 17:52:07 (7280): Setting Network Configuration for NAT.
2025-06-02 17:52:07 (7280): Enabling VM Network Access.
2025-06-02 17:52:07 (7280): Disabling USB Support for VM.
2025-06-02 17:52:08 (7280): Disabling COM Port Support for VM.
2025-06-02 17:52:08 (7280): Disabling LPT Port Support for VM.
2025-06-02 17:52:09 (7280): Disabling Audio Support for VM.
2025-06-02 17:52:09 (7280): Disabling Clipboard Support for VM.
2025-06-02 17:52:09 (7280): Disabling Drag and Drop Support for VM.
2025-06-02 17:52:10 (7280): Adding storage controller(s) to VM.
2025-06-02 17:52:10 (7280): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-02 17:52:15 (7280): Adding VirtualBox Guest Additions to VM.
2025-06-02 17:52:15 (7280): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-02 17:52:16 (7280): forwarding host port 62908 to guest port 80
2025-06-02 17:52:16 (7280): Enabling remote desktop for VM.
2025-06-02 17:52:16 (7280): Required extension pack not installed, remote desktop not enabled.
2025-06-02 17:52:16 (7280): Enabling shared directory for VM.
2025-06-02 17:52:17 (7280): Starting VM using VBoxManage interface. (boinc_1894ee9b411de929, slot#0)
2025-06-02 17:52:33 (7280): Successfully started VM. (PID = '5360')
2025-06-02 17:52:33 (7280): Reporting VM Process ID to BOINC.
2025-06-02 17:52:33 (7280): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-02 17:52:33 (7280): Guest Log: CPUID EDX: 0x178bfbff
2025-06-02 17:52:33 (7280): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-02 17:52:33 (7280): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-02 17:52:33 (7280): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-02 17:52:33 (7280): Detected: Web Application Enabled (http://localhost:62908)
2025-06-02 17:52:33 (7280): Preference change detected
2025-06-02 17:52:33 (7280): Setting CPU throttle for VM. (100%)
2025-06-02 17:52:33 (7280): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-02 17:52:35 (7280): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-02 17:52:35 (7280): Guest Log: BIOS: Booting from Hard Disk...
2025-06-02 17:52:39 (7280): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-02 17:52:39 (7280): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-02 17:52:39 (7280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-02 17:52:50 (7280): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-02 17:52:50 (7280): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-02 17:53:07 (7280): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.000487 main     Log opened 2025-06-02T17:53:05.771180000Z
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.000852 main     OS Product: Linux
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.000958 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.001043 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.001134 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.001136 main     Process ID: 1321
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.001138 main     Package type: LINUX_64BITS_GENERIC
2025-06-02 17:53:07 (7280): Guest Log: 00:00:00.003132 main     5.2.32 r132073 started. Verbose level = 0
2025-06-02 17:53:07 (7280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-02 17:53:07 (7280): Guest Log: [INFO] Mounting shared directory
2025-06-02 17:53:07 (7280): Guest Log: [INFO] Checking for init_data.xml
2025-06-02 17:53:18 (7280): Guest Log: 00:00:10.028915 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 867 596 000ns (GuestNow=1 748 879 596 909 977 000 ns GuestLast=1 748 886 785 777 573 000 ns fSetTimeLastLoop=true )
2025-06-02 17:53:19 (7280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-02 17:53:19 (7280): Guest Log: [INFO] Detected branch: prod
2025-06-02 17:53:20 (7280): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-02 17:53:20 (7280): Guest Log: Copying input files
2025-06-02 17:53:23 (7280): Guest Log: Copied input files into RunAtlas.
2025-06-02 17:53:23 (7280): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-02 17:53:23 (7280): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-02 17:53:23 (7280): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-02 17:53:23 (7280): Guest Log: Further information can be found at the LHC@home message board.
2025-06-02 17:53:33 (7280): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-02 17:53:33 (7280): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-02 17:53:33 (7280): Guest Log: 2.6.3.0 1598 0 32052 146710 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-02 17:53:35 (7280): Guest Log: copied the webapp to /var/www
2025-06-02 17:53:35 (7280): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-02 17:53:35 (7280): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-02 17:53:35 (7280): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-02 17:53:35 (7280): Guest Log:  *** Starting ATLAS job. (PandaID=6677375806 taskID=45006595) ***
2025-06-02 19:37:16 (7280): Status Report: Elapsed Time: '6000.549397'
2025-06-02 19:37:16 (7280): Status Report: CPU Time: '19734.875000'
2025-06-02 21:23:29 (7280): Status Report: Elapsed Time: '12001.374655'
2025-06-02 21:23:29 (7280): Status Report: CPU Time: '42900.140625'
2025-06-02 23:10:05 (7280): Status Report: Elapsed Time: '18003.201838'
2025-06-02 23:10:05 (7280): Status Report: CPU Time: '66179.265625'
2025-06-03 00:56:48 (7280): Status Report: Elapsed Time: '24003.247549'
2025-06-03 00:56:48 (7280): Status Report: CPU Time: '89424.046875'
2025-06-03 02:43:41 (7280): Status Report: Elapsed Time: '30003.708847'
2025-06-03 02:43:41 (7280): Status Report: CPU Time: '112628.781250'
2025-06-03 03:29:52 (7280): Guest Log:  *** Job finished ***
2025-06-03 03:29:52 (7280): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:37,035 | INFO     | [data] queue_monitor thread has finished
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:43,352 | INFO     | job.realtimelogging is not enabled
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:44,355 | INFO     | [payload] run_realtimelog thread has finished
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:45,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000313014080)>', '<ExcThread(monitor, started 139999425066752)>']
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:46,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:46,144 | INFO     | [monitor] control thread has ended
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,446 | INFO     | all workflow threads have been joined
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,447 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,447 | INFO     | traces error code: 0
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,660 [wrapper] ==== pilot stdout END ====
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,672 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,684 [wrapper] pilotpid: 5923
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,696 [wrapper] Pilot exit status: 0
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,904 [wrapper] pandaids: 6677375806
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,985 [wrapper] cleanup supervisor_pilot 10405 5924
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:50,998 [wrapper] Test setup, not cleaning
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:51,010 [wrapper] apfmon messages muted
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:51,023 [wrapper] ==== wrapper stdout END ====
2025-06-03 03:29:52 (7280): Guest Log: 2025-06-03 01:29:51,035 [wrapper] ==== wrapper stderr END ====
2025-06-03 03:29:52 (7280): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 03:29:52 (7280): Guest Log:     "exeErrorCode": 0,
2025-06-03 03:29:52 (7280): Guest Log:     "exeErrorDiag": "",
2025-06-03 03:29:52 (7280): Guest Log:     "pilotErrorCode": 0,
2025-06-03 03:29:52 (7280): Guest Log:     "pilotErrorDiag": "",
2025-06-03 03:29:52 (7280): Guest Log:  *** Listing of results directory ***
2025-06-03 03:29:52 (7280): Guest Log: total 188984
2025-06-03 03:29:52 (7280): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  2 15:48 queuedata.json
2025-06-03 03:29:52 (7280): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  2 15:48 runpilot2-wrapper.sh
2025-06-03 03:29:52 (7280): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  2 15:48 pilot3.tar.gz
2025-06-03 03:29:52 (7280): Guest Log: -rwxr-xr-x. 1 atlas atlas      8902 Jun  2 15:53 init_data.xml
2025-06-03 03:29:52 (7280): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Jun  2 15:53 input.tar.gz
2025-06-03 03:29:52 (7280): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  2 15:53 start_atlas.sh
2025-06-03 03:29:53 (7280): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  2 15:53 EVNT.45006593._000013.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 03:29:53 (7280): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jun  2 15:53 pandaJob.out
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas    988242 Jun  2 15:55 agis_schedconf.cvmfs.json
2025-06-03 03:29:53 (7280): Guest Log: drwx------. 4 atlas atlas      4096 Jun  2 15:55 pilot3
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas 183332465 Jun  3 01:27 HITS.45006595._000321.pool.root.1
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas      1032 Jun  3 01:28 memory_monitor_summary.json
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 01:28 agis_ddmendpoints.agis.ALL.json
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 01:29 pilot_heartbeat.json
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas    500321 Jun  3 01:29 log.45006595._000321.job.log.tgz.1
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas      7725 Jun  3 01:29 heartbeat.json
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  3 01:29 pilotlog.txt
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas   2703989 Jun  3 01:29 log.45006595._000321.job.log.1
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 01:29 output.list
2025-06-03 03:29:53 (7280): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 01:29 runtime_log
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas   3225600 Jun  3 01:29 result.tar.gz
2025-06-03 03:29:53 (7280): Guest Log: -rw-r--r--. 1 atlas atlas      8608 Jun  3 01:29 runtime_log.err
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas       664 Jun  3 01:29 bRYNDmuZMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmeUVKDmReHScm.diag
2025-06-03 03:29:53 (7280): Guest Log: Looking for outputfile HITS.45006595._000321.pool.root.1
2025-06-03 03:29:53 (7280): Guest Log: HITS file was successfully produced
2025-06-03 03:29:53 (7280): Guest Log: -rw-------. 1 atlas atlas 183332465 Jun  3 01:27 /home/atlas/RunAtlas/HITS.45006595._000321.pool.root.1
2025-06-03 03:29:54 (7280): Guest Log: Successfully finished the ATLAS job!
2025-06-03 03:29:54 (7280): Guest Log: Copying the results back to the shared directory!
2025-06-03 03:29:54 (7280): Guest Log:  *** Contents of shared directory: ***
2025-06-03 03:29:55 (7280): Guest Log: total 391732
2025-06-03 03:29:55 (7280): Guest Log: -rwxrwxrwx. 1 root root 214029348 Jun  2 15:51 ATLAS.root_0
2025-06-03 03:29:55 (7280): Guest Log: -rwxrwxrwx. 1 root root 183332465 Jun  3 01:29 HITS.pool.root.1
2025-06-03 03:29:55 (7280): Guest Log: -rwxrwxrwx. 1 root root      8902 Jun  2 15:51 init_data.xml
2025-06-03 03:29:55 (7280): Guest Log: -rwxrwxrwx. 1 root root    508877 Jun  2 15:51 input.tar.gz
2025-06-03 03:29:55 (7280): Guest Log: -rwxrwxrwx. 1 root root   3225600 Jun  3 01:29 result.tar.gz
2025-06-03 03:29:55 (7280): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  2 15:51 start_atlas.sh
2025-06-03 03:29:55 (7280): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 03:29:55 (7280): VM Completion File Detected.
2025-06-03 03:29:55 (7280): Powering off VM.
2025-06-03 03:29:57 (7280): Successfully stopped VM.
2025-06-03 03:29:57 (7280): Deregistering VM. (boinc_1894ee9b411de929, slot#0)
2025-06-03 03:29:57 (7280): Removing network bandwidth throttle group from VM.
2025-06-03 03:29:57 (7280): Removing VM from VirtualBox.
03:30:02 (7280): called boinc_finish(0)

</stderr_txt>
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