Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:14 (546728): wrapper (7.7.26015): starting
03:45:14 (546728): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:45:14] Arguments: --nthreads 4
[2025-06-06 03:45:14] Threads: 4
[2025-06-06 03:45:14] Checking for CVMFS
[2025-06-06 03:45:14] No cvmfs_config command found, will try listing directly
[2025-06-06 03:45:14] CVMFS is ok
[2025-06-06 03:45:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:45:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:45:14] Further information can be found at the LHC@home message board.
[2025-06-06 03:45:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:45:14] Checking for apptainer binary...
[2025-06-06 03:45:14] which: no apptainer in ((null))
[2025-06-06 03:45:14] apptainer is not installed, using version from CVMFS
[2025-06-06 03:45:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:45:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-06-06 03:45:14] apptainer works
[2025-06-06 03:45:14] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:45:14] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:45:14] Starting ATLAS job with PandaID=6677379084
[2025-06-06 03:45:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 06:11:22]  *** The last 200 lines of the pilot log: ***
[2025-06-06 06:11:22] 2025-06-06 04:10:54,605 | INFO     | total number of processed events: 400 (read)
[2025-06-06 06:11:22] 2025-06-06 04:10:54,609 | INFO     | executing command: lscpu
[2025-06-06 06:11:22] 2025-06-06 04:10:54,673 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 06:11:22] 2025-06-06 04:10:54,773 | INFO     | monitor loop #640: job 0:6677379084 is in state 'finished'
[2025-06-06 06:11:22] 2025-06-06 04:10:54,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:11:22] 2025-06-06 04:10:57,276 | INFO     | monitor loop #641: job 0:6677379084 is in state 'finished'
[2025-06-06 06:11:22] 2025-06-06 04:10:57,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,040 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 06:11:22] 2025-06-06 04:10:59,040 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677379084/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,041 | INFO     | extracted standard info from prmon json
[2025-06-06 06:11:22] 2025-06-06 04:10:59,041 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 06:11:22] 2025-06-06 04:10:59,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 06:11:22] 2025-06-06 04:10:59,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 06:11:22] 2025-06-06 04:10:59,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 06:11:22] 2025-06-06 04:10:59,045 | INFO     | fitting pss+swap vs Time
[2025-06-06 06:11:22] 2025-06-06 04:10:59,046 | INFO     | sum of square deviations: 906703512.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,047 | INFO     | sum of deviations: 11626697234.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,047 | INFO     | mean x: 1749178684.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,047 | INFO     | mean y: 2314085.062937063
[2025-06-06 06:11:22] 2025-06-06 04:10:59,047 | INFO     | -- intersect: -22427477680.246292
[2025-06-06 06:11:22] 2025-06-06 04:10:59,047 | INFO     | intersect: -22427477680.246292
[2025-06-06 06:11:22] 2025-06-06 04:10:59,048 | INFO     | chi2: 1.6834670089638426
[2025-06-06 06:11:22] 2025-06-06 04:10:59,048 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | sum of deviations: 11275073927.5
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | mean x: 1749178531.5
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | mean y: 2313500.847826087
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | -- intersect: -24200210458.33297
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | intersect: -24200210458.33297
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | chi2: 1.6858251406854832
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | current chi2=1.6858251406854832 (change=-0.140075909363497 %)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,049 | INFO     | right removable region: 137
[2025-06-06 06:11:22] 2025-06-06 04:10:59,050 | INFO     | sum of square deviations: 814878534.5
[2025-06-06 06:11:22] 2025-06-06 04:10:59,050 | INFO     | sum of deviations: -10216586159.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,050 | INFO     | mean x: 1749178836.5
[2025-06-06 06:11:22] 2025-06-06 04:10:59,051 | INFO     | mean y: 2349813.434782609
[2025-06-06 06:11:22] 2025-06-06 04:10:59,051 | INFO     | -- intersect: 21932779360.909412
[2025-06-06 06:11:22] 2025-06-06 04:10:59,051 | INFO     | intersect: 21932779360.909412
[2025-06-06 06:11:22] 2025-06-06 04:10:59,051 | INFO     | chi2: 0.06022077694803161
[2025-06-06 06:11:22] 2025-06-06 04:10:59,051 | INFO     | current chi2=0.06022077694803161 (change=96.42281217111008 %)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,051 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,052 | INFO     | sum of deviations: -8678106683.999998
[2025-06-06 06:11:22] 2025-06-06 04:10:59,052 | INFO     | mean x: 1749178989.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,052 | INFO     | mean y: 2347019.8571428573
[2025-06-06 06:11:22] 2025-06-06 04:10:59,052 | INFO     | -- intersect: 20811310225.88237
[2025-06-06 06:11:22] 2025-06-06 04:10:59,052 | INFO     | intersect: 20811310225.88237
[2025-06-06 06:11:22] 2025-06-06 04:10:59,053 | INFO     | chi2: 0.05581559032962508
[2025-06-06 06:11:22] 2025-06-06 04:10:59,053 | INFO     | current chi2=0.05581559032962508 (change=7.315061083001378 %)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,053 | INFO     | left removable region: 20
[2025-06-06 06:11:22] 2025-06-06 04:10:59,053 | INFO     | sum of square deviations: 496597218.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | sum of deviations: -2391607662.999999
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | mean x: 1749179111.0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | mean y: 2334835.358974359
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | -- intersect: 8426365446.475137
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | intersect: 8426365446.475137
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | chi2: 0.028153047052990703
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | -- intersect: 8426365446.475137
[2025-06-06 06:11:22] 2025-06-06 04:10:59,054 | INFO     | current memory leak: -4.82 B/s (using 117 data points, chi2=0.03)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,055 | INFO     | ..............................
[2025-06-06 06:11:22] 2025-06-06 04:10:59,055 | INFO     | . Timing measurements:
[2025-06-06 06:11:22] 2025-06-06 04:10:59,055 | INFO     | . get job = 0 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,055 | INFO     | . initial setup = 1 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,055 | INFO     | . payload setup = 7 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,056 | INFO     | . stage-in = 0 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,056 | INFO     | . payload execution = 8698 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,056 | INFO     | . stage-out = 0 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,056 | INFO     | . log creation = 0 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,056 | INFO     | ..............................
[2025-06-06 06:11:22] 2025-06-06 04:10:59,166 | INFO     | 
[2025-06-06 06:11:22] 2025-06-06 04:10:59,166 | INFO     | job summary report
[2025-06-06 06:11:22] 2025-06-06 04:10:59,166 | INFO     | --------------------------------------------------
[2025-06-06 06:11:22] 2025-06-06 04:10:59,166 | INFO     | PanDA job id: 6677379084
[2025-06-06 06:11:22] 2025-06-06 04:10:59,166 | INFO     | task id: 45006595
[2025-06-06 06:11:22] 2025-06-06 04:10:59,166 | INFO     | errors: (none)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | pilot state: finished 
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | transexitcode: 0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | exeerrorcode: 0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | exeerrordiag: 
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | exitcode: 0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | exitmsg: OK
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | cpuconsumptiontime: 33149 s
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | nevents: 400
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | neventsw: 0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | pid: 557354
[2025-06-06 06:11:22] 2025-06-06 04:10:59,167 | INFO     | pgrp: 557354
[2025-06-06 06:11:22] 2025-06-06 04:10:59,168 | INFO     | corecount: 4
[2025-06-06 06:11:22] 2025-06-06 04:10:59,168 | INFO     | event service: False
[2025-06-06 06:11:22] 2025-06-06 04:10:59,168 | INFO     | sizes: {0: 2397343, 5: 2397549, 11: 2397605, 8710: 2425336, 8711: 2434299, 8714: 2434355, 8719: 2434653}
[2025-06-06 06:11:22] 2025-06-06 04:10:59,168 | INFO     | --------------------------------------------------
[2025-06-06 06:11:22] 2025-06-06 04:10:59,168 | INFO     | 
[2025-06-06 06:11:22] 2025-06-06 04:10:59,168 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-06 06:11:22] 2025-06-06 04:10:59,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 06:11:22] 2025-06-06 04:10:59,191 | INFO     | job 6677379084 has completed (purged errors)
[2025-06-06 06:11:22] 2025-06-06 04:10:59,191 | INFO     | overall cleanup function is called
[2025-06-06 06:11:22] 2025-06-06 04:11:00,199 | INFO     | --- collectZombieJob: --- 10, [557354]
[2025-06-06 06:11:22] 2025-06-06 04:11:00,199 | INFO     | zombie collector waiting for pid 557354
[2025-06-06 06:11:22] 2025-06-06 04:11:00,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 06:11:22] 2025-06-06 04:11:00,200 | INFO     | collected zombie processes
[2025-06-06 06:11:22] 2025-06-06 04:11:00,200 | INFO     | will attempt to kill all subprocesses of pid=557354
[2025-06-06 06:11:22] 2025-06-06 04:11:00,556 | INFO     | process IDs to be killed: [557354] (in reverse order)
[2025-06-06 06:11:22] 2025-06-06 04:11:00,662 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 06:11:22] 2025-06-06 04:11:00,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 06:11:22] 2025-06-06 04:11:00,673 | INFO     | did not find any defunct processes belonging to 557354
[2025-06-06 06:11:22] 2025-06-06 04:11:00,683 | INFO     | did not find any defunct processes belonging to 557354
[2025-06-06 06:11:22] 2025-06-06 04:11:00,684 | INFO     | ready for new job
[2025-06-06 06:11:22] 2025-06-06 04:11:00,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 06:11:22] 2025-06-06 04:11:00,686 | INFO     | **************************************
[2025-06-06 06:11:22] 2025-06-06 04:11:00,687 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 06:11:22] 2025-06-06 04:11:00,687 | INFO     | **************************************
[2025-06-06 06:11:22] 2025-06-06 04:11:00,687 | INFO     | 
[2025-06-06 06:11:22] 2025-06-06 04:11:00,690 | INFO     | architecture information:
[2025-06-06 06:11:22] 2025-06-06 04:11:00,691 | INFO     | executing command: cat /etc/os-release
[2025-06-06 06:11:22] 2025-06-06 04:11:00,707 | INFO     | cat /etc/os-release:
[2025-06-06 06:11:22] NAME="CentOS Linux"
[2025-06-06 06:11:22] VERSION="7 (Core)"
[2025-06-06 06:11:22] ID="centos"
[2025-06-06 06:11:22] ID_LIKE="rhel fedora"
[2025-06-06 06:11:22] VERSION_ID="7"
[2025-06-06 06:11:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 06:11:22] ANSI_COLOR="0;31"
[2025-06-06 06:11:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 06:11:22] HOME_URL="https://www.centos.org/"
[2025-06-06 06:11:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 06:11:22] 
[2025-06-06 06:11:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 06:11:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 06:11:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 06:11:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 06:11:22] 
[2025-06-06 06:11:22] 2025-06-06 04:11:00,707 | INFO     | **************************************
[2025-06-06 06:11:22] 2025-06-06 04:11:01,210 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-06 06:11:22] 2025-06-06 04:11:01,228 | INFO     | sufficient remaining disk space (647283867648 B)
[2025-06-06 06:11:22] 2025-06-06 04:11:01,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 06:11:22] 2025-06-06 04:11:01,228 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 06:11:22] 2025-06-06 04:11:01,228 | INFO     | update_server=False
[2025-06-06 06:11:22] 2025-06-06 04:11:01,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 06:11:22] 2025-06-06 04:11:01,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:11:22] 2025-06-06 04:11:01,229 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 06:11:22] 2025-06-06 04:11:01,229 | INFO     | aborting loop
[2025-06-06 06:11:22] 2025-06-06 04:11:01,230 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 06:11:22] 2025-06-06 04:11:01,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 06:11:22] 2025-06-06 04:11:01,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 06:11:22] 2025-06-06 04:11:01,441 | INFO     | all data control threads have been joined
[2025-06-06 06:11:22] 2025-06-06 04:11:01,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 06:11:22] 2025-06-06 04:11:02,234 | INFO     | [job] retrieve thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:02,235 | INFO     | [job] job monitor thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:02,307 | INFO     | [payload] failed_post thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:02,323 | INFO     | [data] copytool_in thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:02,446 | INFO     | [data] control thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:02,459 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:02,558 | INFO     | all job control threads have been joined
[2025-06-06 06:11:22] 2025-06-06 04:11:02,654 | INFO     | all payload control threads have been joined
[2025-06-06 06:11:22] 2025-06-06 04:11:03,110 | INFO     | [job] validate thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,288 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,363 | INFO     | [payload] validate_post thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,563 | INFO     | [job] control thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,613 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,659 | INFO     | [payload] control thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:03,669 | INFO     | [data] copytool_out thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:04,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 06:11:22] 2025-06-06 04:11:04,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 06:11:22] 2025-06-06 04:11:05,173 | INFO     | [job] queue monitor thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:08,480 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 06:11:22] 2025-06-06 04:11:10,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22370573330240)>', '<ExcThread(monitor, started 22369986905856)>']
[2025-06-06 06:11:22] 2025-06-06 04:11:11,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 06:11:22] 2025-06-06 04:11:11,280 | INFO     | [monitor] control thread has ended
[2025-06-06 06:11:22] 2025-06-06 04:11:15,505 | INFO     | all workflow threads have been joined
[2025-06-06 06:11:22] 2025-06-06 04:11:15,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 06:11:22] 2025-06-06 04:11:15,506 | INFO     | traces error code: 0
[2025-06-06 06:11:22] 2025-06-06 04:11:15,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 06:11:22] 2025-06-06 04:11:15,667 [wrapper] ==== pilot stdout END ====
[2025-06-06 06:11:22] 2025-06-06 04:11:15,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 06:11:22] 2025-06-06 04:11:15,674 [wrapper] pilotpid: 550425
[2025-06-06 06:11:22] 2025-06-06 04:11:15,677 [wrapper] Pilot exit status: 0
[2025-06-06 06:11:22] 2025-06-06 04:11:15,688 [wrapper] pandaids: 6677379084
[2025-06-06 06:11:22] 2025-06-06 04:11:15,755 [wrapper] cleanup supervisor_pilot  758314 550426
[2025-06-06 06:11:22] 2025-06-06 04:11:15,759 [wrapper] Test setup, not cleaning
[2025-06-06 06:11:22] 2025-06-06 04:11:15,762 [wrapper] apfmon messages muted
[2025-06-06 06:11:22] 2025-06-06 04:11:15,765 [wrapper] ==== wrapper stdout END ====
[2025-06-06 06:11:22] 2025-06-06 04:11:15,768 [wrapper] ==== wrapper stderr END ====
[2025-06-06 06:11:22]  *** Error codes and diagnostics ***
[2025-06-06 06:11:22]     "exeErrorCode": 0,
[2025-06-06 06:11:22]     "exeErrorDiag": "",
[2025-06-06 06:11:22]     "pilotErrorCode": 0,
[2025-06-06 06:11:22]     "pilotErrorDiag": "",
[2025-06-06 06:11:22]  *** Listing of results directory ***
[2025-06-06 06:11:22] total 387384
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:23 pilot3.tar.gz
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:47 queuedata.json
[2025-06-06 06:11:22] -rwx------ 1 boinc boinc     37140 Jun  2 17:47 runpilot2-wrapper.sh
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 06:11:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:45 run_atlas
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:45 job.xml
[2025-06-06 06:11:22] -rw-r--r-- 2 boinc boinc 216139002 Jun  6 03:45 EVNT.45006593._000061.pool.root.1
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc      6635 Jun  6 03:45 init_data.xml
[2025-06-06 06:11:22] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:45 start_atlas.sh
[2025-06-06 06:11:22] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:45 shared
[2025-06-06 06:11:22] -rw-r--r-- 2 boinc boinc    508875 Jun  6 03:45 input.tar.gz
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:45 boinc_lockfile
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc      2520 Jun  6 03:45 pandaJob.out
[2025-06-06 06:11:22] -rw------- 1 boinc boinc    987721 Jun  6 03:45 agis_schedconf.cvmfs.json
[2025-06-06 06:11:22] -rw------- 1 boinc boinc   1598969 Jun  6 03:45 agis_ddmendpoints.agis.ALL.json
[2025-06-06 06:11:22] drwx------ 4 boinc boinc      4096 Jun  6 03:45 pilot3
[2025-06-06 06:11:22] -rw------- 1 boinc boinc 174508992 Jun  6 06:10 HITS.45006595._001504.pool.root.1
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc       528 Jun  6 06:10 boinc_task_state.xml
[2025-06-06 06:11:22] -rw------- 1 boinc boinc        95 Jun  6 06:10 pilot_heartbeat.json
[2025-06-06 06:11:22] -rw------- 1 boinc boinc      1046 Jun  6 06:10 memory_monitor_summary.json
[2025-06-06 06:11:22] -rw------- 1 boinc boinc    271005 Jun  6 06:10 log.45006595._001504.job.log.tgz.1
[2025-06-06 06:11:22] -rw------- 1 boinc boinc      7716 Jun  6 06:10 heartbeat.json
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc        26 Jun  6 06:11 wrapper_checkpoint.txt
[2025-06-06 06:11:22] -rw------- 1 boinc boinc      4486 Jun  6 06:11 pilotlog.txt
[2025-06-06 06:11:22] -rw------- 1 boinc boinc    826575 Jun  6 06:11 log.45006595._001504.job.log.1
[2025-06-06 06:11:22] -rw------- 1 boinc boinc       357 Jun  6 06:11 output.list
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc       620 Jun  6 06:11 runtime_log
[2025-06-06 06:11:22] -rw------- 1 boinc boinc   1116160 Jun  6 06:11 result.tar.gz
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc      9025 Jun  6 06:11 runtime_log.err
[2025-06-06 06:11:22] -rw------- 1 boinc boinc       662 Jun  6 06:11 A9zNDmlYMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBRVKDmegDh5m.diag
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc      8192 Jun  6 06:11 boinc_mmap_file
[2025-06-06 06:11:22] -rw-r--r-- 1 boinc boinc     20896 Jun  6 06:11 stderr.txt
[2025-06-06 06:11:22] HITS file was successfully produced:
[2025-06-06 06:11:22] -rw------- 1 boinc boinc 174508992 Jun  6 06:10 shared/HITS.pool.root.1
[2025-06-06 06:11:22]  *** Contents of shared directory: ***
[2025-06-06 06:11:22] total 383112
[2025-06-06 06:11:22] -rw-r--r-- 2 boinc boinc 216139002 Jun  6 03:45 ATLAS.root_0
[2025-06-06 06:11:22] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:45 start_atlas.sh
[2025-06-06 06:11:22] -rw-r--r-- 2 boinc boinc    508875 Jun  6 03:45 input.tar.gz
[2025-06-06 06:11:22] -rw------- 1 boinc boinc 174508992 Jun  6 06:10 HITS.pool.root.1
[2025-06-06 06:11:22] -rw------- 1 boinc boinc   1116160 Jun  6 06:11 result.tar.gz
06:11:24 (546728): run_atlas exited; CPU time 33484.030478
06:11:24 (546728): called boinc_finish(0)

</stderr_txt>
]]>

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