Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:13:01 (1331605): wrapper (7.7.26015): starting
16:13:01 (1331605): wrapper: running run_atlas (--nthreads 3)
[2025-06-02 16:13:01] Arguments: --nthreads 3
[2025-06-02 16:13:01] Threads: 3
[2025-06-02 16:13:01] Checking for CVMFS
[2025-06-02 16:13:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 16:13:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 16:13:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 16:13:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 16:13:05] 2.9.2.0 1331801 0 29732 146709 3 1 21886802 36864001 0 130560 0 0 0.000 1290 849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-02 16:13:05] CVMFS is ok
[2025-06-02 16:13:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 16:13:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 16:13:05] Further information can be found at the LHC@home message board.
[2025-06-02 16:13:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 16:13:05] Checking for apptainer binary...
[2025-06-02 16:13:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 16:13:05] Running /usr/bin/apptainer --version
[2025-06-02 16:13:05] apptainer version 1.3.6-4.2
[2025-06-02 16:13:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 16:13:05] thA371b
[2025-06-02 16:13:05] apptainer works
[2025-06-02 16:13:05] Set ATHENA_PROC_NUMBER=3
[2025-06-02 16:13:05] Set ATHENA_CORE_NUMBER=3
[2025-06-02 16:13:05] Starting ATLAS job with PandaID=6669090058
[2025-06-02 16:13:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 17:56:14]  *** The last 200 lines of the pilot log: ***
[2025-06-02 17:56:14] 2025-06-02 15:55:54,664 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:56:14] 2025-06-02 15:55:54,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:56:14] 2025-06-02 15:55:54,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:56:14] 2025-06-02 15:55:54,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:56:14] 2025-06-02 15:55:54,666 | INFO     | fitting pss+swap vs Time
[2025-06-02 17:56:14] 2025-06-02 15:55:54,666 | INFO     | sum of square deviations: 319447850.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,666 | INFO     | sum of deviations: 397962596.9999981
[2025-06-02 17:56:14] 2025-06-02 15:55:54,666 | INFO     | mean x: 1748876669.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,666 | INFO     | mean y: 2379375.881188119
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | -- intersect: -2176340878.545148
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | intersect: -2176340878.545148
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | chi2: 1.6598515249384305
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | sum of square deviations: 274312120.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | sum of deviations: 441463435.4999995
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | mean x: 1748876516.5
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | mean y: 2379523.0520833335
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | -- intersect: -2812169958.90067
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | intersect: -2812169958.90067
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | chi2: 1.6607168261013083
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | current chi2=1.6607168261013083 (change=-0.05213123884137528 %)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | right removable region: 95
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | sum of square deviations: 274312120.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | sum of deviations: -11772301062.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | mean x: 1748876821.5
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | mean y: 2419215.4375
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | -- intersect: 75056720363.5298
[2025-06-02 17:56:14] 2025-06-02 15:55:54,667 | INFO     | intersect: 75056720363.5298
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | chi2: 0.19312952134716582
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | current chi2=0.19312952134716582 (change=88.36465078680278 %)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | sum of square deviations: 233641590.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | sum of deviations: -7547202735.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | mean x: 1748876974.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | mean y: 2403345.769230769
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | -- intersect: 56495466423.07205
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | intersect: 56495466423.07205
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | chi2: 0.1672554677002347
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | current chi2=0.1672554677002347 (change=13.397254581509804 %)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | left removable region: 20
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | sum of square deviations: 130793150.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | sum of deviations: 1454229019.9999995
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | mean x: 1748877096.0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | mean y: 2361194.28
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | -- intersect: -19442600758.364502
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | intersect: -19442600758.364502
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | chi2: 0.0004028519625283477
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | -- intersect: -19442600758.364502
[2025-06-02 17:56:14] 2025-06-02 15:55:54,668 | INFO     | current memory leak: 11.12 B/s (using 75 data points, chi2=0.00)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,669 | INFO     | ..............................
[2025-06-02 17:56:14] 2025-06-02 15:55:54,669 | INFO     | . Timing measurements:
[2025-06-02 17:56:14] 2025-06-02 15:55:54,669 | INFO     | . get job = 0 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,669 | INFO     | . initial setup = 1 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,670 | INFO     | . payload setup = 3 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,670 | INFO     | . stage-in = 0 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,670 | INFO     | . payload execution = 6128 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,670 | INFO     | . stage-out = 0 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,670 | INFO     | . log creation = 0 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,670 | INFO     | ..............................
[2025-06-02 17:56:14] 2025-06-02 15:55:54,691 | INFO     | sufficient remaining disk space (239448621056 B)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | 
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | job summary report
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | --------------------------------------------------
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | PanDA job id: 6669090058
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | task id: 44871837
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | errors: (none)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | pilot state: finished 
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | transexitcode: 0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | exeerrorcode: 0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | exeerrordiag: 
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | exitcode: 0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | exitmsg: OK
[2025-06-02 17:56:14] 2025-06-02 15:55:54,701 | INFO     | cpuconsumptiontime: 17721 s
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | nevents: 400
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | neventsw: 0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | pid: 1342293
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | pgrp: 1342293
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | corecount: 3
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | event service: False
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | sizes: {0: 2405237, 2: 2405443, 10: 2405471, 6135: 2432432, 6136: 2432431, 6137: 2441434, 6140: 2441618, 6143: 2441788}
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | --------------------------------------------------
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | 
[2025-06-02 17:56:14] 2025-06-02 15:55:54,702 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-02 17:56:14] 2025-06-02 15:55:54,704 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6669090058: 2521873 B (within 2537553920 B limit)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,705 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6669090058/HITS.44871837._093207.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,705 | INFO     | total size of present files: 0 B (workdir size: 2521873 B)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,705 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6669090058/HITS.44871837._093207.pool.root.1 since it does not exist
[2025-06-02 17:56:14] 2025-06-02 15:55:54,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | job 6669090058 has completed (purged errors)
[2025-06-02 17:56:14] 2025-06-02 15:55:54,715 | INFO     | overall cleanup function is called
[2025-06-02 17:56:14] 2025-06-02 15:55:54,755 | INFO     | number of running child processes to parent process 1342293: 1
[2025-06-02 17:56:14] 2025-06-02 15:55:54,755 | INFO     | maximum number of monitored processes: 6
[2025-06-02 17:56:14] 2025-06-02 15:55:54,755 | INFO     | aborting job monitoring since job object (job id=6669090058) has expired
[2025-06-02 17:56:14] 2025-06-02 15:55:55,722 | INFO     | --- collectZombieJob: --- 10, [1342293]
[2025-06-02 17:56:14] 2025-06-02 15:55:55,722 | INFO     | zombie collector waiting for pid 1342293
[2025-06-02 17:56:14] 2025-06-02 15:55:55,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 17:56:14] 2025-06-02 15:55:55,722 | INFO     | collected zombie processes
[2025-06-02 17:56:14] 2025-06-02 15:55:55,722 | INFO     | will attempt to kill all subprocesses of pid=1342293
[2025-06-02 17:56:14] 2025-06-02 15:55:55,767 | INFO     | process IDs to be killed: [1342293] (in reverse order)
[2025-06-02 17:56:14] 2025-06-02 15:55:55,792 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 17:56:14] 2025-06-02 15:55:55,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 17:56:14] 2025-06-02 15:55:55,793 | INFO     | did not find any defunct processes belonging to 1342293
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | did not find any defunct processes belonging to 1342293
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | ready for new job
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | **************************************
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | **************************************
[2025-06-02 17:56:14] 2025-06-02 15:55:55,795 | INFO     | 
[2025-06-02 17:56:14] 2025-06-02 15:55:55,796 | INFO     | architecture information:
[2025-06-02 17:56:14] 2025-06-02 15:55:55,796 | INFO     | executing command: cat /etc/os-release
[2025-06-02 17:56:14] 2025-06-02 15:55:55,804 | INFO     | cat /etc/os-release:
[2025-06-02 17:56:14] NAME="CentOS Linux"
[2025-06-02 17:56:14] VERSION="7 (Core)"
[2025-06-02 17:56:14] ID="centos"
[2025-06-02 17:56:14] ID_LIKE="rhel fedora"
[2025-06-02 17:56:14] VERSION_ID="7"
[2025-06-02 17:56:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 17:56:14] ANSI_COLOR="0;31"
[2025-06-02 17:56:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 17:56:14] HOME_URL="https://www.centos.org/"
[2025-06-02 17:56:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 17:56:14] 
[2025-06-02 17:56:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 17:56:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 17:56:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 17:56:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 17:56:14] 
[2025-06-02 17:56:14] 2025-06-02 15:55:55,805 | INFO     | **************************************
[2025-06-02 17:56:14] 2025-06-02 15:55:56,307 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-02 17:56:14] 2025-06-02 15:55:56,317 | INFO     | sufficient remaining disk space (239451766784 B)
[2025-06-02 17:56:14] 2025-06-02 15:55:56,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 17:56:14] 2025-06-02 15:55:56,317 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 17:56:14] 2025-06-02 15:55:56,317 | INFO     | update_server=False
[2025-06-02 17:56:14] 2025-06-02 15:55:56,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 17:56:14] 2025-06-02 15:55:56,317 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 17:56:14] 2025-06-02 15:55:56,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:56:14] 2025-06-02 15:55:56,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:56:14] 2025-06-02 15:55:56,318 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 17:56:14] 2025-06-02 15:55:56,318 | INFO     | aborting loop
[2025-06-02 17:56:14] 2025-06-02 15:55:56,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 17:56:14] 2025-06-02 15:55:56,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 17:56:14] 2025-06-02 15:55:56,393 | INFO     | all payload control threads have been joined
[2025-06-02 17:56:14] 2025-06-02 15:55:56,415 | INFO     | all job control threads have been joined
[2025-06-02 17:56:14] 2025-06-02 15:55:56,489 | INFO     | all data control threads have been joined
[2025-06-02 17:56:14] 2025-06-02 15:55:56,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 17:56:14] 2025-06-02 15:55:57,322 | INFO     | [job] job monitor thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,323 | INFO     | [job] retrieve thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,323 | INFO     | [job] queue monitor thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,398 | INFO     | [payload] control thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,420 | INFO     | [job] control thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,494 | INFO     | [data] control thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,551 | INFO     | [data] copytool_in thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,617 | INFO     | [payload] failed_post thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:57,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 17:56:14] 2025-06-02 15:55:58,152 | INFO     | [payload] validate_post thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:58,253 | INFO     | [job] validate thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:58,268 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:58,274 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:58,438 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:55:58,848 | INFO     | [data] copytool_out thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:56:01,853 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:56:07,050 | INFO     | job.realtimelogging is not enabled
[2025-06-02 17:56:14] 2025-06-02 15:56:08,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 17:56:14] 2025-06-02 15:56:08,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588787066688)>', '<ExcThread(monitor, started 140588154345216)>']
[2025-06-02 17:56:14] 2025-06-02 15:56:09,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 17:56:14] 2025-06-02 15:56:09,375 | INFO     | [monitor] control thread has ended
[2025-06-02 17:56:14] 2025-06-02 15:56:13,934 | INFO     | all workflow threads have been joined
[2025-06-02 17:56:14] 2025-06-02 15:56:13,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 17:56:14] 2025-06-02 15:56:13,934 | INFO     | traces error code: 0
[2025-06-02 17:56:14] 2025-06-02 15:56:13,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 17:56:14] 2025-06-02 15:56:13,983 [wrapper] ==== pilot stdout END ====
[2025-06-02 17:56:14] 2025-06-02 15:56:13,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 17:56:14] 2025-06-02 15:56:13,987 [wrapper] pilotpid: 1335799
[2025-06-02 17:56:14] 2025-06-02 15:56:13,990 [wrapper] Pilot exit status: 0
[2025-06-02 17:56:14] 2025-06-02 15:56:13,996 [wrapper] pandaids: 6669090058
[2025-06-02 17:56:14] 2025-06-02 15:56:14,014 [wrapper] cleanup supervisor_pilot 1355982 1335800
[2025-06-02 17:56:14] 2025-06-02 15:56:14,016 [wrapper] Test setup, not cleaning
[2025-06-02 17:56:14] 2025-06-02 15:56:14,018 [wrapper] apfmon messages muted
[2025-06-02 17:56:14] 2025-06-02 15:56:14,020 [wrapper] ==== wrapper stdout END ====
[2025-06-02 17:56:14] 2025-06-02 15:56:14,023 [wrapper] ==== wrapper stderr END ====
[2025-06-02 17:56:14]  *** Error codes and diagnostics ***
[2025-06-02 17:56:14]     "exeErrorCode": 0,
[2025-06-02 17:56:14]     "exeErrorDiag": "",
[2025-06-02 17:56:14]     "pilotErrorCode": 0,
[2025-06-02 17:56:14]     "pilotErrorDiag": "",
[2025-06-02 17:56:14]  *** Listing of results directory ***
[2025-06-02 17:56:14] total 415572
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc    495897 May 29 03:22 pilot3.tar.gz
[2025-06-02 17:56:14] -rwx------ 1 boinc boinc     37140 May 29 03:33 runpilot2-wrapper.sh
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc      5111 May 29 03:33 queuedata.json
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc       100 Jun  2 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 17:56:14] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 16:13 run_atlas
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc       105 Jun  2 16:13 job.xml
[2025-06-02 17:56:14] -rw-r--r-- 2 boinc boinc 223793038 Jun  2 16:13 EVNT.44871834._003624.pool.root.1
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc      6921 Jun  2 16:13 init_data.xml
[2025-06-02 17:56:14] drwxrwx--x 2 boinc boinc      4096 Jun  2 16:13 shared
[2025-06-02 17:56:14] -rw-r--r-- 2 boinc boinc    508882 Jun  2 16:13 input.tar.gz
[2025-06-02 17:56:14] -rw-r--r-- 2 boinc boinc     15093 Jun  2 16:13 start_atlas.sh
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc         0 Jun  2 16:13 boinc_lockfile
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc      2559 Jun  2 16:13 pandaJob.out
[2025-06-02 17:56:14] -rw------- 1 boinc boinc    988234 Jun  2 16:13 agis_schedconf.cvmfs.json
[2025-06-02 17:56:14] -rw------- 1 boinc boinc   1603667 Jun  2 16:13 agis_ddmendpoints.agis.ALL.json
[2025-06-02 17:56:14] drwx------ 4 boinc boinc      4096 Jun  2 16:13 pilot3
[2025-06-02 17:56:14] -rw------- 1 boinc boinc 196253244 Jun  2 17:55 HITS.44871837._093207.pool.root.1
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc       529 Jun  2 17:55 boinc_task_state.xml
[2025-06-02 17:56:14] -rw------- 1 boinc boinc      1014 Jun  2 17:55 memory_monitor_summary.json
[2025-06-02 17:56:14] -rw------- 1 boinc boinc    241417 Jun  2 17:55 log.44871837._093207.job.log.tgz.1
[2025-06-02 17:56:14] -rw------- 1 boinc boinc        95 Jun  2 17:55 pilot_heartbeat.json
[2025-06-02 17:56:14] -rw------- 1 boinc boinc      7653 Jun  2 17:55 heartbeat.json
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc      8192 Jun  2 17:55 boinc_mmap_file
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc        27 Jun  2 17:55 wrapper_checkpoint.txt
[2025-06-02 17:56:14] -rw------- 1 boinc boinc      4552 Jun  2 17:56 pilotlog.txt
[2025-06-02 17:56:14] -rw------- 1 boinc boinc    588083 Jun  2 17:56 log.44871837._093207.job.log.1
[2025-06-02 17:56:14] -rw------- 1 boinc boinc       357 Jun  2 17:56 output.list
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc       620 Jun  2 17:56 runtime_log
[2025-06-02 17:56:14] -rw------- 1 boinc boinc    849920 Jun  2 17:56 result.tar.gz
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc      8738 Jun  2 17:56 runtime_log.err
[2025-06-02 17:56:14] -rw------- 1 boinc boinc       660 Jun  2 17:56 56kNDmEKhe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8XdKDmlTNH1m.diag
[2025-06-02 17:56:14] -rw-r--r-- 1 boinc boinc     21215 Jun  2 17:56 stderr.txt
[2025-06-02 17:56:14] HITS file was successfully produced:
[2025-06-02 17:56:14] -rw------- 1 boinc boinc 196253244 Jun  2 17:55 shared/HITS.pool.root.1
[2025-06-02 17:56:14]  *** Contents of shared directory: ***
[2025-06-02 17:56:14] total 411560
[2025-06-02 17:56:14] -rw-r--r-- 2 boinc boinc 223793038 Jun  2 16:13 ATLAS.root_0
[2025-06-02 17:56:14] -rw-r--r-- 2 boinc boinc    508882 Jun  2 16:13 input.tar.gz
[2025-06-02 17:56:14] -rw-r--r-- 2 boinc boinc     15093 Jun  2 16:13 start_atlas.sh
[2025-06-02 17:56:14] -rw------- 1 boinc boinc 196253244 Jun  2 17:55 HITS.pool.root.1
[2025-06-02 17:56:14] -rw------- 1 boinc boinc    849920 Jun  2 17:56 result.tar.gz
17:56:15 (1331605): run_atlas exited; CPU time 17746.949315
17:56:15 (1331605): called boinc_finish(0)

</stderr_txt>
]]>

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