Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:37:45 (286746): wrapper (7.7.26015): starting
05:37:45 (286746): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 05:37:45] Arguments: --nthreads 8
[2025-06-02 05:37:45] Threads: 8
[2025-06-02 05:37:45] Checking for CVMFS
[2025-06-02 05:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 05:37:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 05:37:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 05:37:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 05:37:46] 2.12.6.0 4471 34263 516440 146702 2 174 19859711 32935937 14010 16776704 0 132688813 99.548 169721836 27543 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 05:37:46] CVMFS is ok
[2025-06-02 05:37:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 05:37:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 05:37:46] Further information can be found at the LHC@home message board.
[2025-06-02 05:37:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 05:37:46] Checking for apptainer binary...
[2025-06-02 05:37:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 05:37:46] Running /usr/bin/apptainer --version
[2025-06-02 05:37:46] apptainer version 1.4.1-1.el9
[2025-06-02 05:37:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 05:37:46] c7-11-13.aglt2.org
[2025-06-02 05:37:46] apptainer works
[2025-06-02 05:37:46] Set ATHENA_PROC_NUMBER=8
[2025-06-02 05:37:46] Set ATHENA_CORE_NUMBER=8
[2025-06-02 05:37:46] Starting ATLAS job with PandaID=6666849866
[2025-06-02 05:37:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 07:13:05]  *** The last 200 lines of the pilot log: ***
[2025-06-02 07:13:05]  mtime=0
[2025-06-02 07:13:05]  protocol_id=None
[2025-06-02 07:13:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 07:13:05]  replicas=None
[2025-06-02 07:13:05]  scope=mc23_13p6TeV
[2025-06-02 07:13:05]  status=None
[2025-06-02 07:13:05]  status_code=0
[2025-06-02 07:13:05]  storage_token=
[2025-06-02 07:13:05]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6666849866/log.44871837._064230.job.log.tgz.1
[2025-06-02 07:13:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/90/log.44871837._064230.job.log.tgz.1
[2025-06-02 07:13:05]  workdir=None
[2025-06-02 07:13:05] ]
[2025-06-02 07:13:05] 2025-06-02 11:12:36,642 | INFO     | transferring file log.44871837._064230.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6666849866/log.44871837._064230.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-02 07:13:05] 2025-06-02 11:12:36,642 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6666849866/log.44871837._064230.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._064230.job
[2025-06-02 07:13:05] 2025-06-02 11:12:36,667 | INFO     | adding to output.list: log.44871837._064230.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/90/log.44871837._064230.job.log.tg
[2025-06-02 07:13:05] 2025-06-02 11:12:36,668 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 07:13:05] 2025-06-02 11:12:36,668 | INFO     | summary of transferred files:
[2025-06-02 07:13:05] 2025-06-02 11:12:36,668 | INFO     |  -- lfn=log.44871837._064230.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 07:13:05] 2025-06-02 11:12:36,668 | INFO     | stage-out finished correctly
[2025-06-02 07:13:05] 2025-06-02 11:12:38,635 | WARNING  | process 309945 can no longer be monitored (due to stat problems) - aborting
[2025-06-02 07:13:05] 2025-06-02 11:12:38,635 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666849866/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 07:13:05] 2025-06-02 11:12:38,924 | INFO     | number of running child processes to parent process 309945: 1
[2025-06-02 07:13:05] 2025-06-02 11:12:38,924 | INFO     | maximum number of monitored processes: 6
[2025-06-02 07:13:05] 2025-06-02 11:12:39,239 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 07:13:05] 2025-06-02 11:12:41,426 | INFO     | monitor loop #416: job 0:6666849866 is in state 'finished'
[2025-06-02 07:13:05] 2025-06-02 11:12:41,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 07:13:05] 2025-06-02 11:12:41,743 | INFO     | job 6666849866 has state=finished
[2025-06-02 07:13:05] 2025-06-02 11:12:41,743 | INFO     | preparing for final server update for job 6666849866 in state='finished'
[2025-06-02 07:13:05] 2025-06-02 11:12:41,744 | INFO     | this job has now completed (state=finished)
[2025-06-02 07:13:05] 2025-06-02 11:12:41,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 07:13:05] 2025-06-02 11:12:41,744 | INFO     | log transfer has been attempted: DONE
[2025-06-02 07:13:05] 2025-06-02 11:12:41,744 | INFO     | job 6666849866 has finished - writing final server update
[2025-06-02 07:13:05] 2025-06-02 11:12:41,744 | INFO     | total number of processed events: 400 (read)
[2025-06-02 07:13:05] 2025-06-02 11:12:41,761 | INFO     | executing command: lscpu
[2025-06-02 07:13:05] 2025-06-02 11:12:41,841 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 07:13:05] 2025-06-02 11:12:43,932 | INFO     | monitor loop #417: job 0:6666849866 is in state 'finished'
[2025-06-02 07:13:05] 2025-06-02 11:12:43,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 07:13:05] 2025-06-02 11:12:45,721 | INFO     | PID=292297 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 07:13:05] 2025-06-02 11:12:45,722 | INFO     | .. there are 21 such processes running
[2025-06-02 07:13:05] 2025-06-02 11:12:45,923 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 07:13:05] 2025-06-02 11:12:45,923 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666849866/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 07:13:05] 2025-06-02 11:12:45,924 | INFO     | extracted standard info from prmon json
[2025-06-02 07:13:05] 2025-06-02 11:12:45,924 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 07:13:05] 2025-06-02 11:12:45,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 07:13:05] 2025-06-02 11:12:45,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 07:13:05] 2025-06-02 11:12:45,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 07:13:05] 2025-06-02 11:12:45,926 | INFO     | fitting pss+swap vs Time
[2025-06-02 07:13:05] 2025-06-02 11:12:45,926 | INFO     | sum of square deviations: 197203697.5
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | sum of deviations: -6006299394.500002
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | mean x: 1748860000.5
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | mean y: 2240235.3372093025
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | -- intersect: 53267857945.51439
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | intersect: 53267857945.51439
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | chi2: 0.10151098772206399
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | -- intersect: 53267857945.51439
[2025-06-02 07:13:05] 2025-06-02 11:12:45,927 | INFO     | current memory leak: -30.46 B/s (using 86 data points, chi2=0.10)
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | ..............................
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . Timing measurements:
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . get job = 0 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . initial setup = 2 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . payload setup = 6 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . stage-in = 0 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . payload execution = 5653 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . stage-out = 0 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | . log creation = 0 s
[2025-06-02 07:13:05] 2025-06-02 11:12:45,928 | INFO     | ..............................
[2025-06-02 07:13:05] 2025-06-02 11:12:46,005 | INFO     | 
[2025-06-02 07:13:05] 2025-06-02 11:12:46,005 | INFO     | job summary report
[2025-06-02 07:13:05] 2025-06-02 11:12:46,005 | INFO     | --------------------------------------------------
[2025-06-02 07:13:05] 2025-06-02 11:12:46,005 | INFO     | PanDA job id: 6666849866
[2025-06-02 07:13:05] 2025-06-02 11:12:46,005 | INFO     | task id: 44871837
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | errors: (none)
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | pilot state: finished 
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | transexitcode: 0
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | exeerrorcode: 0
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | exeerrordiag: 
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | exitcode: 0
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | exitmsg: OK
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | cpuconsumptiontime: 40762 s
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | nevents: 400
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | neventsw: 0
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | pid: 309945
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | pgrp: 309945
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | corecount: 8
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | event service: False
[2025-06-02 07:13:05] 2025-06-02 11:12:46,006 | INFO     | sizes: {0: 2405234, 5: 2405440, 11: 2405496, 5662: 2432082, 5663: 2432081, 5665: 2441078, 5667: 2441262, 5674: 2441432}
[2025-06-02 07:13:05] 2025-06-02 11:12:46,007 | INFO     | --------------------------------------------------
[2025-06-02 07:13:05] 2025-06-02 11:12:46,007 | INFO     | 
[2025-06-02 07:13:05] 2025-06-02 11:12:46,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 07:13:05] 2025-06-02 11:12:46,031 | INFO     | job 6666849866 has completed (purged errors)
[2025-06-02 07:13:05] 2025-06-02 11:12:46,032 | INFO     | overall cleanup function is called
[2025-06-02 07:13:05] 2025-06-02 11:12:47,040 | INFO     | --- collectZombieJob: --- 10, [309945]
[2025-06-02 07:13:05] 2025-06-02 11:12:47,040 | INFO     | zombie collector waiting for pid 309945
[2025-06-02 07:13:05] 2025-06-02 11:12:47,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 07:13:05] 2025-06-02 11:12:47,040 | INFO     | collected zombie processes
[2025-06-02 07:13:05] 2025-06-02 11:12:47,040 | INFO     | will attempt to kill all subprocesses of pid=309945
[2025-06-02 07:13:05] 2025-06-02 11:12:47,398 | INFO     | process IDs to be killed: [309945] (in reverse order)
[2025-06-02 07:13:05] 2025-06-02 11:12:47,522 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 07:13:05] 2025-06-02 11:12:47,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 07:13:05] 2025-06-02 11:12:47,538 | INFO     | did not find any defunct processes belonging to 309945
[2025-06-02 07:13:05] 2025-06-02 11:12:47,553 | INFO     | did not find any defunct processes belonging to 309945
[2025-06-02 07:13:05] 2025-06-02 11:12:47,554 | INFO     | ready for new job
[2025-06-02 07:13:05] 2025-06-02 11:12:47,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 07:13:05] 2025-06-02 11:12:47,556 | INFO     | **************************************
[2025-06-02 07:13:05] 2025-06-02 11:12:47,556 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 07:13:05] 2025-06-02 11:12:47,556 | INFO     | **************************************
[2025-06-02 07:13:05] 2025-06-02 11:12:47,556 | INFO     | 
[2025-06-02 07:13:05] 2025-06-02 11:12:47,573 | INFO     | architecture information:
[2025-06-02 07:13:05] 2025-06-02 11:12:47,574 | INFO     | executing command: cat /etc/os-release
[2025-06-02 07:13:05] 2025-06-02 11:12:47,591 | INFO     | cat /etc/os-release:
[2025-06-02 07:13:05] NAME="CentOS Linux"
[2025-06-02 07:13:05] VERSION="7 (Core)"
[2025-06-02 07:13:05] ID="centos"
[2025-06-02 07:13:05] ID_LIKE="rhel fedora"
[2025-06-02 07:13:05] VERSION_ID="7"
[2025-06-02 07:13:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 07:13:05] ANSI_COLOR="0;31"
[2025-06-02 07:13:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 07:13:05] HOME_URL="https://www.centos.org/"
[2025-06-02 07:13:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 07:13:05] 
[2025-06-02 07:13:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 07:13:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 07:13:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 07:13:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 07:13:05] 
[2025-06-02 07:13:05] 2025-06-02 11:12:47,592 | INFO     | **************************************
[2025-06-02 07:13:05] 2025-06-02 11:12:48,095 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-02 07:13:05] 2025-06-02 11:12:48,115 | INFO     | sufficient remaining disk space (96013910016 B)
[2025-06-02 07:13:05] 2025-06-02 11:12:48,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 07:13:05] 2025-06-02 11:12:48,115 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 07:13:05] 2025-06-02 11:12:48,115 | INFO     | update_server=False
[2025-06-02 07:13:05] 2025-06-02 11:12:48,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 07:13:05] 2025-06-02 11:12:48,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 07:13:05] 2025-06-02 11:12:48,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 07:13:05] 2025-06-02 11:12:48,116 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 07:13:05] 2025-06-02 11:12:48,116 | INFO     | aborting loop
[2025-06-02 07:13:05] 2025-06-02 11:12:48,117 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 07:13:05] 2025-06-02 11:12:48,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 07:13:05] 2025-06-02 11:12:48,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 07:13:05] 2025-06-02 11:12:48,573 | INFO     | all payload control threads have been joined
[2025-06-02 07:13:05] 2025-06-02 11:12:49,013 | INFO     | all data control threads have been joined
[2025-06-02 07:13:05] 2025-06-02 11:12:49,120 | INFO     | [job] retrieve thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:49,122 | INFO     | [job] job monitor thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:49,184 | INFO     | [data] copytool_in thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:49,187 | INFO     | all job control threads have been joined
[2025-06-02 07:13:05] 2025-06-02 11:12:49,315 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:49,359 | INFO     | [job] validate thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:49,573 | INFO     | [payload] control thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:49,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 07:13:05] 2025-06-02 11:12:49,843 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:50,019 | INFO     | [data] control thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:50,122 | INFO     | [data] copytool_out thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:50,156 | INFO     | [payload] validate_post thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:50,170 | INFO     | [payload] failed_post thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:50,192 | INFO     | [job] control thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:50,481 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:51,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 07:13:05] 2025-06-02 11:12:52,023 | INFO     | [job] queue monitor thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:53,836 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:58,311 | INFO     | job.realtimelogging is not enabled
[2025-06-02 07:13:05] 2025-06-02 11:12:59,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 07:13:05] 2025-06-02 11:12:59,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628319602496)>', '<ExcThread(monitor, started 139627692283648)>']
[2025-06-02 07:13:05] 2025-06-02 11:13:00,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 07:13:05] 2025-06-02 11:13:00,175 | INFO     | [monitor] control thread has ended
[2025-06-02 07:13:05] 2025-06-02 11:13:04,761 | INFO     | all workflow threads have been joined
[2025-06-02 07:13:05] 2025-06-02 11:13:04,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 07:13:05] 2025-06-02 11:13:04,762 | INFO     | traces error code: 0
[2025-06-02 07:13:05] 2025-06-02 11:13:04,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 07:13:05] 2025-06-02 11:13:04,899 [wrapper] ==== pilot stdout END ====
[2025-06-02 07:13:05] 2025-06-02 11:13:04,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 07:13:05] 2025-06-02 11:13:04,905 [wrapper] pilotpid: 292297
[2025-06-02 07:13:05] 2025-06-02 11:13:04,908 [wrapper] Pilot exit status: 0
[2025-06-02 07:13:05] 2025-06-02 11:13:04,920 [wrapper] pandaids: 6666849866
[2025-06-02 07:13:05] 2025-06-02 11:13:05,003 [wrapper] cleanup supervisor_pilot  653242 292298
[2025-06-02 07:13:05] 2025-06-02 11:13:05,007 [wrapper] Test setup, not cleaning
[2025-06-02 07:13:05] 2025-06-02 11:13:05,009 [wrapper] apfmon messages muted
[2025-06-02 07:13:05] 2025-06-02 11:13:05,013 [wrapper] ==== wrapper stdout END ====
[2025-06-02 07:13:05] 2025-06-02 11:13:05,016 [wrapper] ==== wrapper stderr END ====
[2025-06-02 07:13:05]  *** Error codes and diagnostics ***
[2025-06-02 07:13:05]     "exeErrorCode": 0,
[2025-06-02 07:13:05]     "exeErrorDiag": "",
[2025-06-02 07:13:05]     "pilotErrorCode": 0,
[2025-06-02 07:13:05]     "pilotErrorDiag": "",
[2025-06-02 07:13:05]  *** Listing of results directory ***
[2025-06-02 07:13:05] total 413940
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas    495897 May 27 03:30 pilot3.tar.gz
[2025-06-02 07:13:05] -rwx------. 1 boincer umatlas     37140 May 27 03:49 runpilot2-wrapper.sh
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas      5111 May 27 03:49 queuedata.json
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas       100 Jun  2 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 07:13:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 05:37 run_atlas
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas       105 Jun  2 05:37 job.xml
[2025-06-02 07:13:05] -rw-r--r--. 2 boincer umatlas 224664079 Jun  2 05:37 EVNT.44871834._002531.pool.root.1
[2025-06-02 07:13:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 05:37 start_atlas.sh
[2025-06-02 07:13:05] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 05:37 shared
[2025-06-02 07:13:05] -rw-r--r--. 2 boincer umatlas    508872 Jun  2 05:37 input.tar.gz
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas         0 Jun  2 05:37 boinc_lockfile
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas      2559 Jun  2 05:37 pandaJob.out
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas    988177 Jun  2 05:37 agis_schedconf.cvmfs.json
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas   1603667 Jun  2 05:37 agis_ddmendpoints.agis.ALL.json
[2025-06-02 07:13:05] drwx------. 4 boincer umatlas      4096 Jun  2 05:37 pilot3
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas      6897 Jun  2 07:10 init_data.xml
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas        95 Jun  2 07:11 pilot_heartbeat.json
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas 193651133 Jun  2 07:12 HITS.44871837._064230.pool.root.1
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas       529 Jun  2 07:12 boinc_task_state.xml
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas      1029 Jun  2 07:12 memory_monitor_summary.json
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas    313141 Jun  2 07:12 log.44871837._064230.job.log.tgz.1
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas      7691 Jun  2 07:12 heartbeat.json
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 07:13 boinc_mmap_file
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas        27 Jun  2 07:13 wrapper_checkpoint.txt
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas      4548 Jun  2 07:13 pilotlog.txt
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas    547837 Jun  2 07:13 log.44871837._064230.job.log.1
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas       357 Jun  2 07:13 output.list
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas       620 Jun  2 07:13 runtime_log
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas    880640 Jun  2 07:13 result.tar.gz
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas      8659 Jun  2 07:13 runtime_log.err
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas       652 Jun  2 07:13 grFKDmQF4d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4rYKDm4Shxqn.diag
[2025-06-02 07:13:05] -rw-r--r--. 1 boincer umatlas     21735 Jun  2 07:13 stderr.txt
[2025-06-02 07:13:05] HITS file was successfully produced:
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas 193651133 Jun  2 07:12 shared/HITS.pool.root.1
[2025-06-02 07:13:05]  *** Contents of shared directory: ***
[2025-06-02 07:13:05] total 409896
[2025-06-02 07:13:05] -rw-r--r--. 2 boincer umatlas 224664079 Jun  2 05:37 ATLAS.root_0
[2025-06-02 07:13:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 05:37 start_atlas.sh
[2025-06-02 07:13:05] -rw-r--r--. 2 boincer umatlas    508872 Jun  2 05:37 input.tar.gz
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas 193651133 Jun  2 07:12 HITS.pool.root.1
[2025-06-02 07:13:05] -rw-------. 1 boincer umatlas    880640 Jun  2 07:13 result.tar.gz
07:13:06 (286746): run_atlas exited; CPU time 40832.466205
07:13:06 (286746): called boinc_finish(0)

</stderr_txt>
]]>

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