Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:38:45 (99576): wrapper (7.7.26015): starting
04:38:45 (99576): wrapper: running run_atlas (--nthreads 9)
[2025-06-02 04:38:45] Arguments: --nthreads 9
[2025-06-02 04:38:45] Threads: 9
[2025-06-02 04:38:45] Checking for CVMFS
[2025-06-02 04:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 04:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 04:38:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 04:38:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 04:38:49] 2.11.2.0 6612 25673 147936 146699 2 77 10561381 18432001 11439 130560 0 50301979 99.465 58394155 26981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-02 04:38:49] CVMFS is ok
[2025-06-02 04:38:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 04:38:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 04:38:49] Further information can be found at the LHC@home message board.
[2025-06-02 04:38:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 04:38:49] Checking for apptainer binary...
[2025-06-02 04:38:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 04:38:49] Running /usr/bin/apptainer --version
[2025-06-02 04:38:49] apptainer version 1.3.2-1.el7
[2025-06-02 04:38:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 04:39:15] c-210-31-1.aglt2.org
[2025-06-02 04:39:15] apptainer works
[2025-06-02 04:39:16] Set ATHENA_PROC_NUMBER=9
[2025-06-02 04:39:16] Set ATHENA_CORE_NUMBER=9
[2025-06-02 04:39:16] Starting ATLAS job with PandaID=6666121538
[2025-06-02 04:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 13:08:29]  *** The last 200 lines of the pilot log: ***
[2025-06-02 13:08:29] 2025-06-02 17:08:14,254 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 13:08:29] 2025-06-02 17:08:14,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 13:08:29] 2025-06-02 17:08:14,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 13:08:29] 2025-06-02 17:08:14,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 13:08:29] 2025-06-02 17:08:14,374 | INFO     | fitting pss+swap vs Time
[2025-06-02 13:08:29] 2025-06-02 17:08:14,375 | INFO     | sum of square deviations: 37379305400.874535
[2025-06-02 13:08:29] 2025-06-02 17:08:14,466 | INFO     | sum of deviations: 332284500161.0684
[2025-06-02 13:08:29] 2025-06-02 17:08:14,466 | INFO     | mean x: 1748868973.251012
[2025-06-02 13:08:29] 2025-06-02 17:08:14,466 | INFO     | mean y: 2481391.862348178
[2025-06-02 13:08:29] 2025-06-02 17:08:14,466 | INFO     | -- intersect: -15544143843.456161
[2025-06-02 13:08:29] 2025-06-02 17:08:14,467 | INFO     | intersect: -15544143843.456161
[2025-06-02 13:08:29] 2025-06-02 17:08:14,467 | INFO     | chi2: 6.205612605149471
[2025-06-02 13:08:29] 2025-06-02 17:08:14,496 | INFO     | sum of square deviations: 36255767230.04067
[2025-06-02 13:08:29] 2025-06-02 17:08:14,529 | INFO     | sum of deviations: 363113620658.13904
[2025-06-02 13:08:29] 2025-06-02 17:08:14,529 | INFO     | mean x: 1748868820.7566462
[2025-06-02 13:08:29] 2025-06-02 17:08:14,530 | INFO     | mean y: 2485536.572597137
[2025-06-02 13:08:29] 2025-06-02 17:08:14,530 | INFO     | -- intersect: -17513019942.37085
[2025-06-02 13:08:29] 2025-06-02 17:08:14,530 | INFO     | intersect: -17513019942.37085
[2025-06-02 13:08:29] 2025-06-02 17:08:14,540 | INFO     | chi2: 5.345626526235253
[2025-06-02 13:08:29] 2025-06-02 17:08:14,541 | INFO     | current chi2=5.345626526235253 (change=13.85819795132868 %)
[2025-06-02 13:08:29] 2025-06-02 17:08:14,541 | INFO     | right removable region: 488
[2025-06-02 13:08:29] 2025-06-02 17:08:14,542 | INFO     | sum of square deviations: 36255571175.52557
[2025-06-02 13:08:29] 2025-06-02 17:08:14,577 | INFO     | sum of deviations: 167578774767.5339
[2025-06-02 13:08:29] 2025-06-02 17:08:14,577 | INFO     | mean x: 1748869125.7586913
[2025-06-02 13:08:29] 2025-06-02 17:08:14,578 | INFO     | mean y: 2503729.5214723926
[2025-06-02 13:08:29] 2025-06-02 17:08:14,578 | INFO     | -- intersect: -8081035870.628301
[2025-06-02 13:08:29] 2025-06-02 17:08:14,578 | INFO     | intersect: -8081035870.628301
[2025-06-02 13:08:29] 2025-06-02 17:08:14,580 | INFO     | chi2: 2.1243492603468055
[2025-06-02 13:08:29] 2025-06-02 17:08:14,580 | INFO     | current chi2=2.1243492603468055 (change=65.7672917161474 %)
[2025-06-02 13:08:29] 2025-06-02 17:08:14,581 | INFO     | sum of square deviations: 35154611392.14868
[2025-06-02 13:08:29] 2025-06-02 17:08:14,624 | INFO     | sum of deviations: 85018628804.54541
[2025-06-02 13:08:29] 2025-06-02 17:08:14,624 | INFO     | mean x: 1748869278.2644627
[2025-06-02 13:08:29] 2025-06-02 17:08:14,625 | INFO     | mean y: 2515145.1363636362
[2025-06-02 13:08:29] 2025-06-02 17:08:14,625 | INFO     | -- intersect: -4226985967.472913
[2025-06-02 13:08:29] 2025-06-02 17:08:14,625 | INFO     | intersect: -4226985967.472913
[2025-06-02 13:08:29] 2025-06-02 17:08:14,626 | INFO     | chi2: 1.0791997839463099
[2025-06-02 13:08:29] 2025-06-02 17:08:14,626 | INFO     | current chi2=1.0791997839463099 (change=49.19857087105687 %)
[2025-06-02 13:08:29] 2025-06-02 17:08:14,627 | INFO     | sum of square deviations: 34076193549.277634
[2025-06-02 13:08:29] 2025-06-02 17:08:14,667 | INFO     | sum of deviations: 50556492849.73485
[2025-06-02 13:08:29] 2025-06-02 17:08:14,667 | INFO     | mean x: 1748869430.7682672
[2025-06-02 13:08:29] 2025-06-02 17:08:14,667 | INFO     | mean y: 2520012.2588726515
[2025-06-02 13:08:29] 2025-06-02 17:08:14,667 | INFO     | -- intersect: -2592156671.446901
[2025-06-02 13:08:29] 2025-06-02 17:08:14,668 | INFO     | intersect: -2592156671.446901
[2025-06-02 13:08:29] 2025-06-02 17:08:14,689 | INFO     | chi2: 0.9188124420585952
[2025-06-02 13:08:29] 2025-06-02 17:08:14,689 | INFO     | current chi2=0.9188124420585952 (change=14.861691437819442 %)
[2025-06-02 13:08:29] 2025-06-02 17:08:14,689 | INFO     | left removable region: 30
[2025-06-02 13:08:29] 2025-06-02 17:08:14,690 | INFO     | sum of square deviations: 29787675187.783863
[2025-06-02 13:08:29] 2025-06-02 17:08:14,714 | INFO     | sum of deviations: 69170949090.50647
[2025-06-02 13:08:29] 2025-06-02 17:08:14,715 | INFO     | mean x: 1748869705.2772925
[2025-06-02 13:08:29] 2025-06-02 17:08:14,715 | INFO     | mean y: 2526695.2794759823
[2025-06-02 13:08:29] 2025-06-02 17:08:14,715 | INFO     | -- intersect: -4058581685.520772
[2025-06-02 13:08:29] 2025-06-02 17:08:14,715 | INFO     | intersect: -4058581685.520772
[2025-06-02 13:08:29] 2025-06-02 17:08:14,716 | INFO     | chi2: 0.010317702188299603
[2025-06-02 13:08:29] 2025-06-02 17:08:14,716 | INFO     | -- intersect: -4058581685.520772
[2025-06-02 13:08:29] 2025-06-02 17:08:14,716 | INFO     | current memory leak: 2.32 B/s (using 458 data points, chi2=0.01)
[2025-06-02 13:08:29] 2025-06-02 17:08:14,718 | INFO     | ..............................
[2025-06-02 13:08:29] 2025-06-02 17:08:14,718 | INFO     | . Timing measurements:
[2025-06-02 13:08:29] 2025-06-02 17:08:14,718 | INFO     | . get job = 0 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,718 | INFO     | . initial setup = 11 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,747 | INFO     | . payload setup = 85 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,748 | INFO     | . stage-in = 1 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,748 | INFO     | . payload execution = 30220 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,748 | INFO     | . stage-out = 3 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,748 | INFO     | . log creation = 0 s
[2025-06-02 13:08:29] 2025-06-02 17:08:14,748 | INFO     | ..............................
[2025-06-02 13:08:29] 2025-06-02 17:08:15,180 | INFO     | 
[2025-06-02 13:08:29] 2025-06-02 17:08:15,180 | INFO     | job summary report
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | --------------------------------------------------
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | PanDA job id: 6666121538
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | task id: 44871837
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | errors: (none)
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | pilot state: finished 
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | transexitcode: 0
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | exeerrorcode: 0
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | exeerrordiag: 
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | exitcode: 0
[2025-06-02 13:08:29] 2025-06-02 17:08:15,181 | INFO     | exitmsg: OK
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | cpuconsumptiontime: 66889 s
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | nevents: 400
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | neventsw: 0
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | pid: 136686
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | pgrp: 136686
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | corecount: 9
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | event service: False
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | sizes: {0: 2405007, 1: 2405063, 2: 2405290, 3: 2405318, 14: 2405318, 24: 2405346, 35: 2405502, 46: 2405530, 53: 2405764, 58: 2405792, 30310: 2443223, 30311: 244350
[2025-06-02 13:08:29] 2025-06-02 17:08:15,182 | INFO     | --------------------------------------------------
[2025-06-02 13:08:29] 2025-06-02 17:08:15,183 | INFO     | 
[2025-06-02 13:08:29] 2025-06-02 17:08:15,183 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-02 13:08:29] 2025-06-02 17:08:15,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 13:08:29] 2025-06-02 17:08:15,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 13:08:29] 2025-06-02 17:08:15,458 | INFO     | job 6666121538 has completed (purged errors)
[2025-06-02 13:08:29] 2025-06-02 17:08:15,458 | INFO     | overall cleanup function is called
[2025-06-02 13:08:29] 2025-06-02 17:08:16,494 | INFO     | --- collectZombieJob: --- 10, [136686]
[2025-06-02 13:08:29] 2025-06-02 17:08:16,494 | INFO     | zombie collector waiting for pid 136686
[2025-06-02 13:08:29] 2025-06-02 17:08:16,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 13:08:29] 2025-06-02 17:08:16,495 | INFO     | collected zombie processes
[2025-06-02 13:08:29] 2025-06-02 17:08:16,495 | INFO     | will attempt to kill all subprocesses of pid=136686
[2025-06-02 13:08:29] 2025-06-02 17:08:17,187 | INFO     | process IDs to be killed: [136686] (in reverse order)
[2025-06-02 13:08:29] 2025-06-02 17:08:17,298 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 13:08:29] 2025-06-02 17:08:17,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 13:08:29] 2025-06-02 17:08:17,309 | INFO     | did not find any defunct processes belonging to 136686
[2025-06-02 13:08:29] 2025-06-02 17:08:17,317 | INFO     | did not find any defunct processes belonging to 136686
[2025-06-02 13:08:29] 2025-06-02 17:08:17,318 | INFO     | ready for new job
[2025-06-02 13:08:29] 2025-06-02 17:08:17,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 13:08:29] 2025-06-02 17:08:17,320 | INFO     | **************************************
[2025-06-02 13:08:29] 2025-06-02 17:08:17,321 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 13:08:29] 2025-06-02 17:08:17,321 | INFO     | **************************************
[2025-06-02 13:08:29] 2025-06-02 17:08:17,321 | INFO     | 
[2025-06-02 13:08:29] 2025-06-02 17:08:17,325 | INFO     | architecture information:
[2025-06-02 13:08:29] 2025-06-02 17:08:17,325 | INFO     | executing command: cat /etc/os-release
[2025-06-02 13:08:29] 2025-06-02 17:08:17,352 | INFO     | cat /etc/os-release:
[2025-06-02 13:08:29] NAME="CentOS Linux"
[2025-06-02 13:08:29] VERSION="7 (Core)"
[2025-06-02 13:08:29] ID="centos"
[2025-06-02 13:08:29] ID_LIKE="rhel fedora"
[2025-06-02 13:08:29] VERSION_ID="7"
[2025-06-02 13:08:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 13:08:29] ANSI_COLOR="0;31"
[2025-06-02 13:08:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 13:08:29] HOME_URL="https://www.centos.org/"
[2025-06-02 13:08:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 13:08:29] 
[2025-06-02 13:08:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 13:08:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 13:08:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 13:08:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 13:08:29] 
[2025-06-02 13:08:29] 2025-06-02 17:08:17,353 | INFO     | **************************************
[2025-06-02 13:08:29] 2025-06-02 17:08:17,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-02 13:08:29] 2025-06-02 17:08:17,901 | INFO     | sufficient remaining disk space (56251908096 B)
[2025-06-02 13:08:29] 2025-06-02 17:08:17,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 13:08:29] 2025-06-02 17:08:17,902 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 13:08:29] 2025-06-02 17:08:17,903 | INFO     | update_server=False
[2025-06-02 13:08:29] 2025-06-02 17:08:17,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 13:08:29] 2025-06-02 17:08:17,904 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 13:08:29] 2025-06-02 17:08:17,905 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 13:08:29] 2025-06-02 17:08:17,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 13:08:29] 2025-06-02 17:08:17,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 13:08:29] 2025-06-02 17:08:17,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 13:08:29] 2025-06-02 17:08:18,207 | INFO     | all job control threads have been joined
[2025-06-02 13:08:29] 2025-06-02 17:08:18,238 | INFO     | all data control threads have been joined
[2025-06-02 13:08:29] 2025-06-02 17:08:18,298 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 13:08:29] 2025-06-02 17:08:18,299 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 13:08:29] 2025-06-02 17:08:18,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 13:08:29] 2025-06-02 17:08:18,299 | INFO     | will abort loop
[2025-06-02 13:08:29] 2025-06-02 17:08:18,303 | INFO     | all payload control threads have been joined
[2025-06-02 13:08:29] 2025-06-02 17:08:18,909 | INFO     | [job] retrieve thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 13:08:29] 2025-06-02 17:08:19,213 | INFO     | [job] control thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,244 | INFO     | [data] control thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,247 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,303 | INFO     | [job] job monitor thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,309 | INFO     | [payload] control thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,491 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,498 | INFO     | [payload] failed_post thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,505 | INFO     | [payload] validate_post thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,776 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:19,914 | INFO     | [data] copytool_out thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:20,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:20,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 13:08:29] 2025-06-02 17:08:20,248 | INFO     | [job] validate thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:20,296 | INFO     | [data] copytool_in thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:21,199 | INFO     | [job] queue monitor thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:23,043 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 13:08:29] 2025-06-02 17:08:23,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793676142400)>', '<ExcThread(monitor, started 139793224673024)>']
[2025-06-02 13:08:29] 2025-06-02 17:08:23,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 13:08:29] 2025-06-02 17:08:23,940 | INFO     | [monitor] control thread has ended
[2025-06-02 13:08:29] 2025-06-02 17:08:28,291 | INFO     | all workflow threads have been joined
[2025-06-02 13:08:29] 2025-06-02 17:08:28,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 13:08:29] 2025-06-02 17:08:28,292 | INFO     | traces error code: 0
[2025-06-02 13:08:29] 2025-06-02 17:08:28,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 13:08:29] 2025-06-02 17:08:28,567 [wrapper] ==== pilot stdout END ====
[2025-06-02 13:08:29] 2025-06-02 17:08:28,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 13:08:29] 2025-06-02 17:08:28,580 [wrapper] pilotpid: 112394
[2025-06-02 13:08:29] 2025-06-02 17:08:28,589 [wrapper] Pilot exit status: 0
[2025-06-02 13:08:29] 2025-06-02 17:08:28,626 [wrapper] pandaids: 6666121538
[2025-06-02 13:08:29] 2025-06-02 17:08:28,704 [wrapper] cleanup supervisor_pilot  54640 112395
[2025-06-02 13:08:29] 2025-06-02 17:08:28,710 [wrapper] Test setup, not cleaning
[2025-06-02 13:08:29] 2025-06-02 17:08:28,714 [wrapper] apfmon messages muted
[2025-06-02 13:08:29] 2025-06-02 17:08:28,719 [wrapper] ==== wrapper stdout END ====
[2025-06-02 13:08:29] 2025-06-02 17:08:28,723 [wrapper] ==== wrapper stderr END ====
[2025-06-02 13:08:29]  *** Error codes and diagnostics ***
[2025-06-02 13:08:29]     "exeErrorCode": 0,
[2025-06-02 13:08:29]     "exeErrorDiag": "",
[2025-06-02 13:08:29]     "pilotErrorCode": 0,
[2025-06-02 13:08:29]     "pilotErrorDiag": "",
[2025-06-02 13:08:29]  *** Listing of results directory ***
[2025-06-02 13:08:29] total 422468
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas    495897 May 26 14:09 pilot3.tar.gz
[2025-06-02 13:08:29] -rwx------ 1 boincer umatlas     37140 May 26 14:20 runpilot2-wrapper.sh
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas      5111 May 26 14:20 queuedata.json
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas       100 Jun  2 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 13:08:29] -rwxr-xr-x 1 boincer umatlas      7986 Jun  2 04:38 run_atlas
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas       105 Jun  2 04:38 job.xml
[2025-06-02 13:08:29] -rw-r--r-- 2 boincer umatlas 222558831 Jun  2 04:38 EVNT.44871834._002181.pool.root.1
[2025-06-02 13:08:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  2 04:38 start_atlas.sh
[2025-06-02 13:08:29] drwxrwx--x 2 boincer umatlas      4096 Jun  2 04:38 shared
[2025-06-02 13:08:29] -rw-r--r-- 2 boincer umatlas    508875 Jun  2 04:38 input.tar.gz
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas         0 Jun  2 04:38 boinc_lockfile
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas      2559 Jun  2 04:39 pandaJob.out
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas    988196 Jun  2 04:40 agis_schedconf.cvmfs.json
[2025-06-02 13:08:29] drwx------ 4 boincer umatlas      4096 Jun  2 04:40 pilot3
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas      6355 Jun  2 13:00 init_data.xml
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas 200271669 Jun  2 13:06 HITS.44871837._054942.pool.root.1
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas       531 Jun  2 13:06 boinc_task_state.xml
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas        95 Jun  2 13:07 pilot_heartbeat.json
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas      1054 Jun  2 13:07 memory_monitor_summary.json
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas   1603667 Jun  2 13:07 agis_ddmendpoints.agis.ALL.json
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas    560432 Jun  2 13:07 log.44871837._054942.job.log.tgz.1
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas      7755 Jun  2 13:08 heartbeat.json
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas      8192 Jun  2 13:08 boinc_mmap_file
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas        28 Jun  2 13:08 wrapper_checkpoint.txt
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas      4662 Jun  2 13:08 pilotlog.txt
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas   2407870 Jun  2 13:08 log.44871837._054942.job.log.1
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas       357 Jun  2 13:08 output.list
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas       620 Jun  2 13:08 runtime_log
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas   2990080 Jun  2 13:08 result.tar.gz
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas      8670 Jun  2 13:08 runtime_log.err
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas       665 Jun  2 13:08 qeKODmtbrd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPRXKDmO7gN7n.diag
[2025-06-02 13:08:29] -rw-r--r-- 1 boincer umatlas     20945 Jun  2 13:08 stderr.txt
[2025-06-02 13:08:29] HITS file was successfully produced:
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas 200271669 Jun  2 13:06 shared/HITS.pool.root.1
[2025-06-02 13:08:29]  *** Contents of shared directory: ***
[2025-06-02 13:08:29] total 416368
[2025-06-02 13:08:29] -rw-r--r-- 2 boincer umatlas 222558831 Jun  2 04:38 ATLAS.root_0
[2025-06-02 13:08:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  2 04:38 start_atlas.sh
[2025-06-02 13:08:29] -rw-r--r-- 2 boincer umatlas    508875 Jun  2 04:38 input.tar.gz
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas 200271669 Jun  2 13:06 HITS.pool.root.1
[2025-06-02 13:08:29] -rw------- 1 boincer umatlas   2990080 Jun  2 13:08 result.tar.gz
13:08:30 (99576): run_atlas exited; CPU time 67558.029337
13:08:30 (99576): called boinc_finish(0)

</stderr_txt>
]]>

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