Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:00 (960414): wrapper (7.7.26015): starting
04:04:00 (960414): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 04:04:00] Arguments: --nthreads 8
[2025-06-02 04:04:00] Threads: 8
[2025-06-02 04:04:00] Checking for CVMFS
[2025-06-02 04:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 04:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 04:04:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 04:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 04:04:00] 2.12.6.0 599889 20128 442488 146698 3 511 16704655 32935936 18781 16776704 0 103602361 99.619 102606186 27234 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 04:04:00] CVMFS is ok
[2025-06-02 04:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 04:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 04:04:00] Further information can be found at the LHC@home message board.
[2025-06-02 04:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 04:04:00] Checking for apptainer binary...
[2025-06-02 04:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 04:04:00] Running /usr/bin/apptainer --version
[2025-06-02 04:04:00] apptainer version 1.4.1-1.el9
[2025-06-02 04:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 04:04:01] c6-12-27-1.aglt2.org
[2025-06-02 04:04:01] apptainer works
[2025-06-02 04:04:01] Set ATHENA_PROC_NUMBER=8
[2025-06-02 04:04:01] Set ATHENA_CORE_NUMBER=8
[2025-06-02 04:04:01] Starting ATLAS job with PandaID=6668980584
[2025-06-02 04:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 06:29:04]  *** The last 200 lines of the pilot log: ***
[2025-06-02 06:29:04] 2025-06-02 10:28:49,566 | INFO     | extracted standard info from prmon json
[2025-06-02 06:29:04] 2025-06-02 10:28:49,566 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 06:29:04] 2025-06-02 10:28:49,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 06:29:04] 2025-06-02 10:28:49,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 06:29:04] 2025-06-02 10:28:49,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 06:29:04] 2025-06-02 10:28:49,570 | INFO     | fitting pss+swap vs Time
[2025-06-02 06:29:04] 2025-06-02 10:28:49,571 | INFO     | sum of square deviations: 887780072.4859148
[2025-06-02 06:29:04] 2025-06-02 10:28:49,571 | INFO     | sum of deviations: 14322904040.028172
[2025-06-02 06:29:04] 2025-06-02 10:28:49,571 | INFO     | mean x: 1748855788.584507
[2025-06-02 06:29:04] 2025-06-02 10:28:49,571 | INFO     | mean y: 2176192.8309859154
[2025-06-02 06:29:04] 2025-06-02 10:28:49,572 | INFO     | -- intersect: -28212800033.886585
[2025-06-02 06:29:04] 2025-06-02 10:28:49,572 | INFO     | intersect: -28212800033.886585
[2025-06-02 06:29:04] 2025-06-02 10:28:49,572 | INFO     | chi2: 2.5595452399543253
[2025-06-02 06:29:04] 2025-06-02 10:28:49,572 | INFO     | sum of square deviations: 797261104.9489026
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | sum of deviations: 21377207201.927025
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | mean x: 1748855636.0875912
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | mean y: 2187700.8394160583
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | -- intersect: -46890416324.15991
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | intersect: -46890416324.15991
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | chi2: 1.9161375368148201
[2025-06-02 06:29:04] 2025-06-02 10:28:49,573 | INFO     | current chi2=1.9161375368148201 (change=25.137578859555017 %)
[2025-06-02 06:29:04] 2025-06-02 10:28:49,574 | INFO     | sum of square deviations: 713114349.9090884
[2025-06-02 06:29:04] 2025-06-02 10:28:49,574 | INFO     | sum of deviations: 21155130474.09091
[2025-06-02 06:29:04] 2025-06-02 10:28:49,574 | INFO     | mean x: 1748855483.590909
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | mean y: 2187299.742424242
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | -- intersect: -51879065602.28044
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | intersect: -51879065602.28044
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | chi2: 1.9139619472694154
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | current chi2=1.9139619472694154 (change=0.11354036459309802 %)
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | right removable region: 131
[2025-06-02 06:29:04] 2025-06-02 10:28:49,575 | INFO     | sum of square deviations: 797253784.9489026
[2025-06-02 06:29:04] 2025-06-02 10:28:49,576 | INFO     | sum of deviations: -9441099344.686132
[2025-06-02 06:29:04] 2025-06-02 10:28:49,576 | INFO     | mean x: 1748855941.0875912
[2025-06-02 06:29:04] 2025-06-02 10:28:49,576 | INFO     | mean y: 2215791.890510949
[2025-06-02 06:29:04] 2025-06-02 10:28:49,576 | INFO     | -- intersect: 20712211769.408176
[2025-06-02 06:29:04] 2025-06-02 10:28:49,576 | INFO     | intersect: 20712211769.408176
[2025-06-02 06:29:04] 2025-06-02 10:28:49,577 | INFO     | chi2: 0.7883674414503902
[2025-06-02 06:29:04] 2025-06-02 10:28:49,577 | INFO     | current chi2=0.7883674414503902 (change=69.19892529563344 %)
[2025-06-02 06:29:04] 2025-06-02 10:28:49,577 | INFO     | sum of square deviations: 713099709.9090884
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | sum of deviations: -6676813678.863637
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | mean x: 1748856093.590909
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | mean y: 2210617.2803030303
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | -- intersect: 16376900055.227846
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | intersect: 16376900055.227846
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | chi2: 0.7218454862910938
[2025-06-02 06:29:04] 2025-06-02 10:28:49,578 | INFO     | current chi2=0.7218454862910938 (change=8.437937903284459 %)
[2025-06-02 06:29:04] 2025-06-02 10:28:49,579 | INFO     | left removable region: 20
[2025-06-02 06:29:04] 2025-06-02 10:28:49,579 | INFO     | sum of square deviations: 424019305.09909904
[2025-06-02 06:29:04] 2025-06-02 10:28:49,579 | INFO     | sum of deviations: 888316330.0630634
[2025-06-02 06:29:04] 2025-06-02 10:28:49,579 | INFO     | mean x: 1748856063.09009
[2025-06-02 06:29:04] 2025-06-02 10:28:49,579 | INFO     | mean y: 2225678.6936936937
[2025-06-02 06:29:04] 2025-06-02 10:28:49,580 | INFO     | -- intersect: -3661610804.9061356
[2025-06-02 06:29:04] 2025-06-02 10:28:49,580 | INFO     | intersect: -3661610804.9061356
[2025-06-02 06:29:04] 2025-06-02 10:28:49,580 | INFO     | chi2: 0.018827374715820147
[2025-06-02 06:29:04] 2025-06-02 10:28:49,580 | INFO     | -- intersect: -3661610804.9061356
[2025-06-02 06:29:04] 2025-06-02 10:28:49,580 | INFO     | current memory leak: 2.09 B/s (using 111 data points, chi2=0.02)
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | ..............................
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . Timing measurements:
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . get job = 0 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . initial setup = 3 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . payload setup = 11 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . stage-in = 0 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . payload execution = 8634 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . stage-out = 1 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | . log creation = 0 s
[2025-06-02 06:29:04] 2025-06-02 10:28:49,581 | INFO     | ..............................
[2025-06-02 06:29:04] 2025-06-02 10:28:50,090 | INFO     | 
[2025-06-02 06:29:04] 2025-06-02 10:28:50,091 | INFO     | job summary report
[2025-06-02 06:29:04] 2025-06-02 10:28:50,091 | INFO     | --------------------------------------------------
[2025-06-02 06:29:04] 2025-06-02 10:28:50,091 | INFO     | PanDA job id: 6668980584
[2025-06-02 06:29:04] 2025-06-02 10:28:50,091 | INFO     | task id: 44871837
[2025-06-02 06:29:04] 2025-06-02 10:28:50,091 | INFO     | errors: (none)
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | pilot state: finished 
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | transexitcode: 0
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | exeerrorcode: 0
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | exeerrordiag: 
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | exitcode: 0
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | exitmsg: OK
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | cpuconsumptiontime: 59379 s
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | nevents: 400
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | neventsw: 0
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | pid: 973246
[2025-06-02 06:29:04] 2025-06-02 10:28:50,092 | INFO     | pgrp: 973246
[2025-06-02 06:29:04] 2025-06-02 10:28:50,093 | INFO     | corecount: 8
[2025-06-02 06:29:04] 2025-06-02 10:28:50,093 | INFO     | event service: False
[2025-06-02 06:29:04] 2025-06-02 10:28:50,093 | INFO     | sizes: {0: 2405012, 1: 2405211, 7: 2405417, 12: 2405445, 8649: 2433421, 8650: 2442362, 8652: 2442546, 8659: 2442716}
[2025-06-02 06:29:04] 2025-06-02 10:28:50,093 | INFO     | --------------------------------------------------
[2025-06-02 06:29:04] 2025-06-02 10:28:50,093 | INFO     | 
[2025-06-02 06:29:04] 2025-06-02 10:28:50,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-02 06:29:04] 2025-06-02 10:28:50,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | job 6668980584 has completed (purged errors)
[2025-06-02 06:29:04] 2025-06-02 10:28:50,124 | INFO     | overall cleanup function is called
[2025-06-02 06:29:04] 2025-06-02 10:28:51,135 | INFO     | --- collectZombieJob: --- 10, [973246]
[2025-06-02 06:29:04] 2025-06-02 10:28:51,136 | INFO     | zombie collector waiting for pid 973246
[2025-06-02 06:29:04] 2025-06-02 10:28:51,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 06:29:04] 2025-06-02 10:28:51,136 | INFO     | collected zombie processes
[2025-06-02 06:29:04] 2025-06-02 10:28:51,136 | INFO     | will attempt to kill all subprocesses of pid=973246
[2025-06-02 06:29:04] 2025-06-02 10:28:51,551 | INFO     | process IDs to be killed: [973246] (in reverse order)
[2025-06-02 06:29:04] 2025-06-02 10:28:51,683 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 06:29:04] 2025-06-02 10:28:51,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 06:29:04] 2025-06-02 10:28:51,702 | INFO     | did not find any defunct processes belonging to 973246
[2025-06-02 06:29:04] 2025-06-02 10:28:51,719 | INFO     | did not find any defunct processes belonging to 973246
[2025-06-02 06:29:04] 2025-06-02 10:28:51,720 | INFO     | ready for new job
[2025-06-02 06:29:04] 2025-06-02 10:28:51,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 06:29:04] 2025-06-02 10:28:51,722 | INFO     | **************************************
[2025-06-02 06:29:04] 2025-06-02 10:28:51,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 06:29:04] 2025-06-02 10:28:51,722 | INFO     | **************************************
[2025-06-02 06:29:04] 2025-06-02 10:28:51,722 | INFO     | 
[2025-06-02 06:29:04] 2025-06-02 10:28:51,740 | INFO     | architecture information:
[2025-06-02 06:29:04] 2025-06-02 10:28:51,740 | INFO     | executing command: cat /etc/os-release
[2025-06-02 06:29:04] 2025-06-02 10:28:51,763 | INFO     | cat /etc/os-release:
[2025-06-02 06:29:04] NAME="CentOS Linux"
[2025-06-02 06:29:04] VERSION="7 (Core)"
[2025-06-02 06:29:04] ID="centos"
[2025-06-02 06:29:04] ID_LIKE="rhel fedora"
[2025-06-02 06:29:04] VERSION_ID="7"
[2025-06-02 06:29:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 06:29:04] ANSI_COLOR="0;31"
[2025-06-02 06:29:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 06:29:04] HOME_URL="https://www.centos.org/"
[2025-06-02 06:29:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 06:29:04] 
[2025-06-02 06:29:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 06:29:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 06:29:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 06:29:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 06:29:04] 
[2025-06-02 06:29:04] 2025-06-02 10:28:51,764 | INFO     | **************************************
[2025-06-02 06:29:04] 2025-06-02 10:28:52,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-02 06:29:04] 2025-06-02 10:28:52,289 | INFO     | sufficient remaining disk space (96612646912 B)
[2025-06-02 06:29:04] 2025-06-02 10:28:52,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 06:29:04] 2025-06-02 10:28:52,290 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 06:29:04] 2025-06-02 10:28:52,290 | INFO     | update_server=False
[2025-06-02 06:29:04] 2025-06-02 10:28:52,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 06:29:04] 2025-06-02 10:28:52,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 06:29:04] 2025-06-02 10:28:52,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 06:29:04] 2025-06-02 10:28:52,496 | INFO     | aborting loop
[2025-06-02 06:29:04] 2025-06-02 10:28:52,713 | INFO     | all data control threads have been joined
[2025-06-02 06:29:04] 2025-06-02 10:28:53,295 | INFO     | [job] retrieve thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:53,313 | INFO     | all job control threads have been joined
[2025-06-02 06:29:04] 2025-06-02 10:28:53,502 | INFO     | [job] job monitor thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:53,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:53,698 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:53,711 | INFO     | PID=964005 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 06:29:04] 2025-06-02 10:28:53,712 | INFO     | .. there are 19 such processes running
[2025-06-02 06:29:04] 2025-06-02 10:28:53,712 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 06:29:04] 2025-06-02 10:28:53,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 06:29:04] 2025-06-02 10:28:53,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 06:29:04] 2025-06-02 10:28:53,713 | INFO     | all payload control threads have been joined
[2025-06-02 06:29:04] 2025-06-02 10:28:53,720 | INFO     | [data] control thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:53,811 | INFO     | [payload] validate_post thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:53,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 06:29:04] 2025-06-02 10:28:53,881 | INFO     | [payload] failed_post thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,067 | INFO     | [data] copytool_in thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,088 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,115 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,296 | INFO     | [data] copytool_out thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,318 | INFO     | [job] control thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,518 | INFO     | [job] validate thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:54,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 06:29:04] 2025-06-02 10:28:54,718 | INFO     | [payload] control thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:55,698 | INFO     | [job] queue monitor thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:57,852 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 06:29:04] 2025-06-02 10:28:59,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616904263488)>', '<ExcThread(monitor, started 140616239388416)>']
[2025-06-02 06:29:04] 2025-06-02 10:28:59,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 06:29:04] 2025-06-02 10:28:59,747 | INFO     | [monitor] control thread has ended
[2025-06-02 06:29:04] 2025-06-02 10:29:04,073 | INFO     | all workflow threads have been joined
[2025-06-02 06:29:04] 2025-06-02 10:29:04,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 06:29:04] 2025-06-02 10:29:04,078 | INFO     | traces error code: 0
[2025-06-02 06:29:04] 2025-06-02 10:29:04,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 06:29:04] 2025-06-02 10:29:04,417 [wrapper] ==== pilot stdout END ====
[2025-06-02 06:29:04] 2025-06-02 10:29:04,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 06:29:04] 2025-06-02 10:29:04,427 [wrapper] pilotpid: 964005
[2025-06-02 06:29:04] 2025-06-02 10:29:04,431 [wrapper] Pilot exit status: 0
[2025-06-02 06:29:04] 2025-06-02 10:29:04,446 [wrapper] pandaids: 6668980584
[2025-06-02 06:29:04] 2025-06-02 10:29:04,544 [wrapper] cleanup supervisor_pilot 1439377 964006
[2025-06-02 06:29:04] 2025-06-02 10:29:04,549 [wrapper] Test setup, not cleaning
[2025-06-02 06:29:04] 2025-06-02 10:29:04,554 [wrapper] apfmon messages muted
[2025-06-02 06:29:04] 2025-06-02 10:29:04,559 [wrapper] ==== wrapper stdout END ====
[2025-06-02 06:29:04] 2025-06-02 10:29:04,563 [wrapper] ==== wrapper stderr END ====
[2025-06-02 06:29:04]  *** Error codes and diagnostics ***
[2025-06-02 06:29:04]     "exeErrorCode": 0,
[2025-06-02 06:29:04]     "exeErrorDiag": "",
[2025-06-02 06:29:04]     "pilotErrorCode": 0,
[2025-06-02 06:29:04]     "pilotErrorDiag": "",
[2025-06-02 06:29:04]  *** Listing of results directory ***
[2025-06-02 06:29:04] total 414628
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas    495897 May 28 18:21 pilot3.tar.gz
[2025-06-02 06:29:04] -rwx------. 1 boincer umatlas     37140 May 28 18:28 runpilot2-wrapper.sh
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas      5111 May 28 18:28 queuedata.json
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas       100 Jun  2 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 06:29:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 04:03 run_atlas
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas       105 Jun  2 04:03 job.xml
[2025-06-02 06:29:04] -rw-r--r--. 2 boincer umatlas 225087362 Jun  2 04:04 EVNT.44871834._003555.pool.root.1
[2025-06-02 06:29:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 04:04 start_atlas.sh
[2025-06-02 06:29:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 04:04 shared
[2025-06-02 06:29:04] -rw-r--r--. 2 boincer umatlas    508875 Jun  2 04:04 input.tar.gz
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas         0 Jun  2 04:04 boinc_lockfile
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas      2558 Jun  2 04:04 pandaJob.out
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas    988196 Jun  2 04:04 agis_schedconf.cvmfs.json
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas   1603667 Jun  2 04:04 agis_ddmendpoints.agis.ALL.json
[2025-06-02 06:29:04] drwx------. 4 boincer umatlas      4096 Jun  2 04:04 pilot3
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas      6859 Jun  2 06:18 init_data.xml
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas 193418025 Jun  2 06:28 HITS.44871837._091403.pool.root.1
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas       529 Jun  2 06:28 boinc_task_state.xml
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas      1041 Jun  2 06:28 memory_monitor_summary.json
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas    336661 Jun  2 06:28 log.44871837._091403.job.log.tgz.1
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas        95 Jun  2 06:28 pilot_heartbeat.json
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas      7721 Jun  2 06:28 heartbeat.json
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 06:28 boinc_mmap_file
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas        27 Jun  2 06:28 wrapper_checkpoint.txt
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas      4748 Jun  2 06:29 pilotlog.txt
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas    779970 Jun  2 06:29 log.44871837._091403.job.log.1
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas       357 Jun  2 06:29 output.list
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas       620 Jun  2 06:29 runtime_log
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas   1136640 Jun  2 06:29 result.tar.gz
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas      8669 Jun  2 06:29 runtime_log.err
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas       656 Jun  2 06:29 Rt0KDmKRee7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnFUKDm12XtAo.diag
[2025-06-02 06:29:04] -rw-r--r--. 1 boincer umatlas     20957 Jun  2 06:29 stderr.txt
[2025-06-02 06:29:04] HITS file was successfully produced:
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas 193418025 Jun  2 06:28 shared/HITS.pool.root.1
[2025-06-02 06:29:04]  *** Contents of shared directory: ***
[2025-06-02 06:29:04] total 410332
[2025-06-02 06:29:04] -rw-r--r--. 2 boincer umatlas 225087362 Jun  2 04:04 ATLAS.root_0
[2025-06-02 06:29:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 04:04 start_atlas.sh
[2025-06-02 06:29:04] -rw-r--r--. 2 boincer umatlas    508875 Jun  2 04:04 input.tar.gz
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas 193418025 Jun  2 06:28 HITS.pool.root.1
[2025-06-02 06:29:04] -rw-------. 1 boincer umatlas   1136640 Jun  2 06:29 result.tar.gz
06:29:06 (960414): run_atlas exited; CPU time 59754.469698
06:29:06 (960414): called boinc_finish(0)

</stderr_txt>
]]>

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