Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:22:45 (40942): wrapper (7.7.26015): starting
03:22:45 (40942): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 03:22:45] Arguments: --nthreads 8
[2025-06-02 03:22:45] Threads: 8
[2025-06-02 03:22:45] Checking for CVMFS
[2025-06-02 03:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 03:22:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 03:22:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 03:22:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 03:22:45] 2.11.2.0 4919 269606 573552 146698 0 18 13486531 18432000 221 130560 0 123164807 98.820 324583403 38711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-02 03:22:45] CVMFS is ok
[2025-06-02 03:22:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 03:22:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 03:22:45] Further information can be found at the LHC@home message board.
[2025-06-02 03:22:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 03:22:45] Checking for apptainer binary...
[2025-06-02 03:22:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 03:22:45] Running /usr/bin/apptainer --version
[2025-06-02 03:22:45] apptainer version 1.3.2-1.el7
[2025-06-02 03:22:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 03:22:46] c-211-32.aglt2.org
[2025-06-02 03:22:46] apptainer works
[2025-06-02 03:22:46] Set ATHENA_PROC_NUMBER=8
[2025-06-02 03:22:46] Set ATHENA_CORE_NUMBER=8
[2025-06-02 03:22:46] Starting ATLAS job with PandaID=6668190708
[2025-06-02 03:22:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 06:29:52]  *** The last 200 lines of the pilot log: ***
[2025-06-02 06:29:52] 2025-06-02 10:29:40,499 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 06:29:52] 2025-06-02 10:29:40,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 06:29:52] 2025-06-02 10:29:40,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 06:29:52] 2025-06-02 10:29:40,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 06:29:52] 2025-06-02 10:29:40,504 | INFO     | fitting pss+swap vs Time
[2025-06-02 06:29:52] 2025-06-02 10:29:40,505 | INFO     | sum of square deviations: 1931608310.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,506 | INFO     | sum of deviations: 8340562543.500004
[2025-06-02 06:29:52] 2025-06-02 10:29:40,506 | INFO     | mean x: 1748854578.5
[2025-06-02 06:29:52] 2025-06-02 10:29:40,507 | INFO     | mean y: 2471370.657608696
[2025-06-02 06:29:52] 2025-06-02 10:29:40,507 | INFO     | -- intersect: -7548972116.073708
[2025-06-02 06:29:52] 2025-06-02 10:29:40,507 | INFO     | intersect: -7548972116.073708
[2025-06-02 06:29:52] 2025-06-02 10:29:40,507 | INFO     | chi2: 2.080496351453471
[2025-06-02 06:29:52] 2025-06-02 10:29:40,508 | INFO     | sum of square deviations: 1778377530.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,509 | INFO     | sum of deviations: 20137149993.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,509 | INFO     | mean x: 1748854426.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,509 | INFO     | mean y: 2482845.374301676
[2025-06-02 06:29:52] 2025-06-02 10:29:40,509 | INFO     | -- intersect: -19800367392.102505
[2025-06-02 06:29:52] 2025-06-02 10:29:40,509 | INFO     | intersect: -19800367392.102505
[2025-06-02 06:29:52] 2025-06-02 10:29:40,510 | INFO     | chi2: 1.3062614654229487
[2025-06-02 06:29:52] 2025-06-02 10:29:40,510 | INFO     | current chi2=1.3062614654229487 (change=37.21395067526209 %)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,510 | INFO     | sum of square deviations: 1633472487.5
[2025-06-02 06:29:52] 2025-06-02 10:29:40,511 | INFO     | sum of deviations: 19620422653.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,511 | INFO     | mean x: 1748854273.5
[2025-06-02 06:29:52] 2025-06-02 10:29:40,511 | INFO     | mean y: 2482301.425287356
[2025-06-02 06:29:52] 2025-06-02 10:29:40,511 | INFO     | -- intersect: -21003846404.53968
[2025-06-02 06:29:52] 2025-06-02 10:29:40,511 | INFO     | intersect: -21003846404.53968
[2025-06-02 06:29:52] 2025-06-02 10:29:40,512 | INFO     | chi2: 1.3071244587097712
[2025-06-02 06:29:52] 2025-06-02 10:29:40,512 | INFO     | current chi2=1.3071244587097712 (change=-0.06606589183453129 %)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,512 | INFO     | right removable region: 173
[2025-06-02 06:29:52] 2025-06-02 10:29:40,512 | INFO     | sum of square deviations: 1778377530.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,513 | INFO     | sum of deviations: -17633185576.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,513 | INFO     | mean x: 1748854731.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,514 | INFO     | mean y: 2496918.441340782
[2025-06-02 06:29:52] 2025-06-02 10:29:40,514 | INFO     | -- intersect: 17342954440.52247
[2025-06-02 06:29:52] 2025-06-02 10:29:40,514 | INFO     | intersect: 17342954440.52247
[2025-06-02 06:29:52] 2025-06-02 10:29:40,514 | INFO     | chi2: 0.8114993296060504
[2025-06-02 06:29:52] 2025-06-02 10:29:40,514 | INFO     | current chi2=0.8114993296060504 (change=60.994916956277144 %)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,515 | INFO     | sum of square deviations: 1633472487.5
[2025-06-02 06:29:52] 2025-06-02 10:29:40,515 | INFO     | sum of deviations: -18635343779.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,516 | INFO     | mean x: 1748854883.5
[2025-06-02 06:29:52] 2025-06-02 10:29:40,516 | INFO     | mean y: 2497951.2298850575
[2025-06-02 06:29:52] 2025-06-02 10:29:40,516 | INFO     | -- intersect: 19954172817.50491
[2025-06-02 06:29:52] 2025-06-02 10:29:40,516 | INFO     | intersect: 19954172817.50491
[2025-06-02 06:29:52] 2025-06-02 10:29:40,516 | INFO     | chi2: 0.8052960003148115
[2025-06-02 06:29:52] 2025-06-02 10:29:40,516 | INFO     | current chi2=0.8052960003148115 (change=0.7644281473714049 %)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,517 | INFO     | left removable region: 20
[2025-06-02 06:29:52] 2025-06-02 10:29:40,517 | INFO     | sum of square deviations: 1110539892.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,518 | INFO     | sum of deviations: -5608962200.000001
[2025-06-02 06:29:52] 2025-06-02 10:29:40,518 | INFO     | mean x: 1748854853.0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,518 | INFO     | mean y: 2510050.843137255
[2025-06-02 06:29:52] 2025-06-02 10:29:40,518 | INFO     | -- intersect: 8835385694.866882
[2025-06-02 06:29:52] 2025-06-02 10:29:40,518 | INFO     | intersect: 8835385694.866882
[2025-06-02 06:29:52] 2025-06-02 10:29:40,518 | INFO     | chi2: 0.010242928148274108
[2025-06-02 06:29:52] 2025-06-02 10:29:40,519 | INFO     | -- intersect: 8835385694.866882
[2025-06-02 06:29:52] 2025-06-02 10:29:40,519 | INFO     | current memory leak: -5.05 B/s (using 153 data points, chi2=0.01)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,519 | INFO     | ..............................
[2025-06-02 06:29:52] 2025-06-02 10:29:40,519 | INFO     | . Timing measurements:
[2025-06-02 06:29:52] 2025-06-02 10:29:40,519 | INFO     | . get job = 0 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | . initial setup = 2 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | . payload setup = 4 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | . stage-in = 0 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | . payload execution = 11178 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | . stage-out = 1 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | . log creation = 0 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,520 | INFO     | ..............................
[2025-06-02 06:29:52] 2025-06-02 10:29:40,937 | INFO     | 
[2025-06-02 06:29:52] 2025-06-02 10:29:40,937 | INFO     | job summary report
[2025-06-02 06:29:52] 2025-06-02 10:29:40,938 | INFO     | --------------------------------------------------
[2025-06-02 06:29:52] 2025-06-02 10:29:40,938 | INFO     | PanDA job id: 6668190708
[2025-06-02 06:29:52] 2025-06-02 10:29:40,938 | INFO     | task id: 44871837
[2025-06-02 06:29:52] 2025-06-02 10:29:40,938 | INFO     | errors: (none)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 06:29:52] 2025-06-02 10:29:40,939 | INFO     | pilot state: finished 
[2025-06-02 06:29:52] 2025-06-02 10:29:40,939 | INFO     | transexitcode: 0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,939 | INFO     | exeerrorcode: 0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,939 | INFO     | exeerrordiag: 
[2025-06-02 06:29:52] 2025-06-02 10:29:40,940 | INFO     | exitcode: 0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,940 | INFO     | exitmsg: OK
[2025-06-02 06:29:52] 2025-06-02 10:29:40,940 | INFO     | cpuconsumptiontime: 86536 s
[2025-06-02 06:29:52] 2025-06-02 10:29:40,940 | INFO     | nevents: 400
[2025-06-02 06:29:52] 2025-06-02 10:29:40,940 | INFO     | neventsw: 0
[2025-06-02 06:29:52] 2025-06-02 10:29:40,941 | INFO     | pid: 34827
[2025-06-02 06:29:52] 2025-06-02 10:29:40,941 | INFO     | pgrp: 34827
[2025-06-02 06:29:52] 2025-06-02 10:29:40,941 | INFO     | corecount: 8
[2025-06-02 06:29:52] 2025-06-02 10:29:40,941 | INFO     | event service: False
[2025-06-02 06:29:52] 2025-06-02 10:29:40,942 | INFO     | sizes: {0: 2405012, 1: 2405211, 4: 2405417, 11: 2405445, 11187: 2434530, 11189: 2443655, 11192: 2443769}
[2025-06-02 06:29:52] 2025-06-02 10:29:40,942 | INFO     | --------------------------------------------------
[2025-06-02 06:29:52] 2025-06-02 10:29:40,942 | INFO     | 
[2025-06-02 06:29:52] 2025-06-02 10:29:40,942 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-02 06:29:52] 2025-06-02 10:29:40,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,970 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 06:29:52] 2025-06-02 10:29:40,971 | INFO     | job 6668190708 has completed (purged errors)
[2025-06-02 06:29:52] 2025-06-02 10:29:40,971 | INFO     | overall cleanup function is called
[2025-06-02 06:29:52] 2025-06-02 10:29:41,980 | INFO     | --- collectZombieJob: --- 10, [34827]
[2025-06-02 06:29:52] 2025-06-02 10:29:41,980 | INFO     | zombie collector waiting for pid 34827
[2025-06-02 06:29:52] 2025-06-02 10:29:41,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 06:29:52] 2025-06-02 10:29:41,980 | INFO     | collected zombie processes
[2025-06-02 06:29:52] 2025-06-02 10:29:41,981 | INFO     | will attempt to kill all subprocesses of pid=34827
[2025-06-02 06:29:52] 2025-06-02 10:29:42,127 | INFO     | process IDs to be killed: [34827] (in reverse order)
[2025-06-02 06:29:52] 2025-06-02 10:29:42,174 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 06:29:52] 2025-06-02 10:29:42,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 06:29:52] 2025-06-02 10:29:42,179 | INFO     | did not find any defunct processes belonging to 34827
[2025-06-02 06:29:52] 2025-06-02 10:29:42,182 | INFO     | did not find any defunct processes belonging to 34827
[2025-06-02 06:29:52] 2025-06-02 10:29:42,182 | INFO     | ready for new job
[2025-06-02 06:29:52] 2025-06-02 10:29:42,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 06:29:52] 2025-06-02 10:29:42,184 | INFO     | **************************************
[2025-06-02 06:29:52] 2025-06-02 10:29:42,184 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 06:29:52] 2025-06-02 10:29:42,184 | INFO     | **************************************
[2025-06-02 06:29:52] 2025-06-02 10:29:42,184 | INFO     | 
[2025-06-02 06:29:52] 2025-06-02 10:29:42,186 | INFO     | architecture information:
[2025-06-02 06:29:52] 2025-06-02 10:29:42,186 | INFO     | executing command: cat /etc/os-release
[2025-06-02 06:29:52] 2025-06-02 10:29:42,196 | INFO     | cat /etc/os-release:
[2025-06-02 06:29:52] NAME="CentOS Linux"
[2025-06-02 06:29:52] VERSION="7 (Core)"
[2025-06-02 06:29:52] ID="centos"
[2025-06-02 06:29:52] ID_LIKE="rhel fedora"
[2025-06-02 06:29:52] VERSION_ID="7"
[2025-06-02 06:29:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 06:29:52] ANSI_COLOR="0;31"
[2025-06-02 06:29:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 06:29:52] HOME_URL="https://www.centos.org/"
[2025-06-02 06:29:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 06:29:52] 
[2025-06-02 06:29:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 06:29:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 06:29:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 06:29:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 06:29:52] 
[2025-06-02 06:29:52] 2025-06-02 10:29:42,196 | INFO     | **************************************
[2025-06-02 06:29:52] 2025-06-02 10:29:42,635 | INFO     | 11210s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-02 06:29:52] 2025-06-02 10:29:42,699 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-02 06:29:52] 2025-06-02 10:29:42,710 | INFO     | sufficient remaining disk space (55875469312 B)
[2025-06-02 06:29:52] 2025-06-02 10:29:42,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 06:29:52] 2025-06-02 10:29:42,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 06:29:52] 2025-06-02 10:29:42,710 | INFO     | update_server=False
[2025-06-02 06:29:52] 2025-06-02 10:29:42,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 06:29:52] 2025-06-02 10:29:42,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 06:29:52] 2025-06-02 10:29:42,711 | INFO     | aborting loop
[2025-06-02 06:29:52] 2025-06-02 10:29:42,877 | INFO     | all job control threads have been joined
[2025-06-02 06:29:52] 2025-06-02 10:29:42,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 06:29:52] 2025-06-02 10:29:43,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 06:29:52] 2025-06-02 10:29:43,696 | INFO     | all data control threads have been joined
[2025-06-02 06:29:52] 2025-06-02 10:29:43,716 | INFO     | [job] retrieve thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:43,716 | INFO     | [job] job monitor thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:43,765 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:43,791 | INFO     | PID=5646 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-02 06:29:52] 2025-06-02 10:29:43,792 | INFO     | .. there are 2 such processes running
[2025-06-02 06:29:52] 2025-06-02 10:29:43,792 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 06:29:52] 2025-06-02 10:29:43,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 06:29:52] 2025-06-02 10:29:43,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 06:29:52] 2025-06-02 10:29:43,882 | INFO     | [job] control thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:43,886 | INFO     | all payload control threads have been joined
[2025-06-02 06:29:52] 2025-06-02 10:29:44,065 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,207 | INFO     | [data] copytool_in thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,563 | INFO     | [payload] failed_post thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,606 | INFO     | [job] validate thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,615 | INFO     | [payload] validate_post thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,701 | INFO     | [data] control thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,887 | INFO     | [payload] control thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:44,970 | INFO     | [data] copytool_out thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:45,157 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:45,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 06:29:52] 2025-06-02 10:29:46,611 | INFO     | [job] queue monitor thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:47,535 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 06:29:52] 2025-06-02 10:29:47,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222013159232)>', '<ExcThread(monitor, started 140221706376960)>']
[2025-06-02 06:29:52] 2025-06-02 10:29:47,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 06:29:52] 2025-06-02 10:29:47,813 | INFO     | [monitor] control thread has ended
[2025-06-02 06:29:52] 2025-06-02 10:29:52,634 | INFO     | all workflow threads have been joined
[2025-06-02 06:29:52] 2025-06-02 10:29:52,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 06:29:52] 2025-06-02 10:29:52,635 | INFO     | traces error code: 0
[2025-06-02 06:29:52] 2025-06-02 10:29:52,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 06:29:52] 2025-06-02 10:29:52,722 [wrapper] ==== pilot stdout END ====
[2025-06-02 06:29:52] 2025-06-02 10:29:52,724 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 06:29:52] 2025-06-02 10:29:52,726 [wrapper] pilotpid: 5646
[2025-06-02 06:29:52] 2025-06-02 10:29:52,728 [wrapper] Pilot exit status: 0
[2025-06-02 06:29:52] 2025-06-02 10:29:52,735 [wrapper] pandaids: 6668190708
[2025-06-02 06:29:52] 2025-06-02 10:29:52,765 [wrapper] cleanup supervisor_pilot 26287 5647
[2025-06-02 06:29:52] 2025-06-02 10:29:52,767 [wrapper] Test setup, not cleaning
[2025-06-02 06:29:52] 2025-06-02 10:29:52,769 [wrapper] apfmon messages muted
[2025-06-02 06:29:52] 2025-06-02 10:29:52,771 [wrapper] ==== wrapper stdout END ====
[2025-06-02 06:29:52] 2025-06-02 10:29:52,773 [wrapper] ==== wrapper stderr END ====
[2025-06-02 06:29:52]  *** Error codes and diagnostics ***
[2025-06-02 06:29:52]     "exeErrorCode": 0,
[2025-06-02 06:29:52]     "exeErrorDiag": "",
[2025-06-02 06:29:52]     "pilotErrorCode": 0,
[2025-06-02 06:29:52]     "pilotErrorDiag": "",
[2025-06-02 06:29:52]  *** Listing of results directory ***
[2025-06-02 06:29:52] total 415564
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas    495897 May 28 01:33 pilot3.tar.gz
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas      5111 May 28 01:45 queuedata.json
[2025-06-02 06:29:52] -rwx------ 1 boincer umatlas     37140 May 28 01:47 runpilot2-wrapper.sh
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas       100 Jun  2 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 06:29:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  2 03:22 run_atlas
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas       105 Jun  2 03:22 job.xml
[2025-06-02 06:29:52] -rw-r--r-- 2 boincer umatlas 223126389 Jun  2 03:22 EVNT.44871834._001778.pool.root.1
[2025-06-02 06:29:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  2 03:22 start_atlas.sh
[2025-06-02 06:29:52] drwxrwx--x 2 boincer umatlas      4096 Jun  2 03:22 shared
[2025-06-02 06:29:52] -rw-r--r-- 2 boincer umatlas    508885 Jun  2 03:22 input.tar.gz
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas         0 Jun  2 03:22 boinc_lockfile
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas      2558 Jun  2 03:22 pandaJob.out
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas    988196 Jun  2 03:22 agis_schedconf.cvmfs.json
[2025-06-02 06:29:52] drwx------ 4 boincer umatlas      4096 Jun  2 03:22 pilot3
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas      6036 Jun  2 06:28 init_data.xml
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas 195724945 Jun  2 06:29 HITS.44871837._079512.pool.root.1
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  2 06:29 boinc_mmap_file
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas        28 Jun  2 06:29 wrapper_checkpoint.txt
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas       530 Jun  2 06:29 boinc_task_state.xml
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas      1058 Jun  2 06:29 memory_monitor_summary.json
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas   1603667 Jun  2 06:29 agis_ddmendpoints.agis.ALL.json
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas    370453 Jun  2 06:29 log.44871837._079512.job.log.tgz.1
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas        95 Jun  2 06:29 pilot_heartbeat.json
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas      7737 Jun  2 06:29 heartbeat.json
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas      4860 Jun  2 06:29 pilotlog.txt
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas   1050318 Jun  2 06:29 log.44871837._079512.job.log.1
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas       357 Jun  2 06:29 output.list
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas       620 Jun  2 06:29 runtime_log
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas   1443840 Jun  2 06:29 result.tar.gz
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas      8660 Jun  2 06:29 runtime_log.err
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas       660 Jun  2 06:29 MJANDmboOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGObKDmNf6O2m.diag
[2025-06-02 06:29:52] -rw-r--r-- 1 boincer umatlas     20869 Jun  2 06:29 stderr.txt
[2025-06-02 06:29:52] HITS file was successfully produced:
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas 195724945 Jun  2 06:29 shared/HITS.pool.root.1
[2025-06-02 06:29:52]  *** Contents of shared directory: ***
[2025-06-02 06:29:52] total 410972
[2025-06-02 06:29:52] -rw-r--r-- 2 boincer umatlas 223126389 Jun  2 03:22 ATLAS.root_0
[2025-06-02 06:29:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  2 03:22 start_atlas.sh
[2025-06-02 06:29:52] -rw-r--r-- 2 boincer umatlas    508885 Jun  2 03:22 input.tar.gz
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas 195724945 Jun  2 06:29 HITS.pool.root.1
[2025-06-02 06:29:52] -rw------- 1 boincer umatlas   1443840 Jun  2 06:29 result.tar.gz
06:29:54 (40942): run_atlas exited; CPU time 86759.443709
06:29:54 (40942): called boinc_finish(0)

</stderr_txt>
]]>

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