Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:19:01 (173368): wrapper (7.7.26015): starting
02:19:01 (173368): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 02:19:01] Arguments: --nthreads 8
[2025-06-02 02:19:01] Threads: 8
[2025-06-02 02:19:01] Checking for CVMFS
[2025-06-02 02:19:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 02:19:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 02:19:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 02:19:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 02:19:02] 2.12.6.0 5013 34062 640172 146695 0 772 26750857 32935937 27250 16776704 1 466069616 99.665 395776137 36126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 02:19:02] CVMFS is ok
[2025-06-02 02:19:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 02:19:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 02:19:02] Further information can be found at the LHC@home message board.
[2025-06-02 02:19:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 02:19:02] Checking for apptainer binary...
[2025-06-02 02:19:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 02:19:02] Running /usr/bin/apptainer --version
[2025-06-02 02:19:02] apptainer version 1.4.1-1.el9
[2025-06-02 02:19:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 02:19:02] c7-9-15.aglt2.org
[2025-06-02 02:19:02] apptainer works
[2025-06-02 02:19:02] Set ATHENA_PROC_NUMBER=8
[2025-06-02 02:19:02] Set ATHENA_CORE_NUMBER=8
[2025-06-02 02:19:02] Starting ATLAS job with PandaID=6666054866
[2025-06-02 02:19:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 03:23:21]  *** The last 200 lines of the pilot log: ***
[2025-06-02 03:23:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-02 03:23:21]  is_altstaged=None
[2025-06-02 03:23:21]  is_tar=False
[2025-06-02 03:23:21]  lfn=log.44871837._054268.job.log.tgz.1
[2025-06-02 03:23:21]  mtime=0
[2025-06-02 03:23:21]  protocol_id=None
[2025-06-02 03:23:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 03:23:21]  replicas=None
[2025-06-02 03:23:21]  scope=mc23_13p6TeV
[2025-06-02 03:23:21]  status=None
[2025-06-02 03:23:21]  status_code=0
[2025-06-02 03:23:21]  storage_token=
[2025-06-02 03:23:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666054866/log.44871837._054268.job.log.tgz.1
[2025-06-02 03:23:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/f3/log.44871837._054268.job.log.tgz.1
[2025-06-02 03:23:21]  workdir=None
[2025-06-02 03:23:21] ]
[2025-06-02 03:23:21] 2025-06-02 07:22:58,344 | INFO     | transferring file log.44871837._054268.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666054866/log.44871837._054268.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-02 03:23:21] 2025-06-02 07:22:58,344 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666054866/log.44871837._054268.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._054268.job
[2025-06-02 03:23:21] 2025-06-02 07:22:58,360 | INFO     | adding to output.list: log.44871837._054268.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/f3/log.44871837._054268.job.log.tg
[2025-06-02 03:23:21] 2025-06-02 07:22:58,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 03:23:21] 2025-06-02 07:22:58,361 | INFO     | summary of transferred files:
[2025-06-02 03:23:21] 2025-06-02 07:22:58,361 | INFO     |  -- lfn=log.44871837._054268.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 03:23:21] 2025-06-02 07:22:58,361 | INFO     | stage-out finished correctly
[2025-06-02 03:23:21] 2025-06-02 07:23:00,372 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 03:23:21] 2025-06-02 07:23:00,660 | INFO     | monitor loop #285: job 0:6666054866 is in state 'finished'
[2025-06-02 03:23:21] 2025-06-02 07:23:00,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 03:23:21] 2025-06-02 07:23:00,967 | INFO     | PID=181040 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 03:23:21] 2025-06-02 07:23:00,967 | INFO     | .. there are 30 such processes running
[2025-06-02 03:23:21] 2025-06-02 07:23:02,662 | INFO     | job 6666054866 has state=finished
[2025-06-02 03:23:21] 2025-06-02 07:23:02,662 | INFO     | preparing for final server update for job 6666054866 in state='finished'
[2025-06-02 03:23:21] 2025-06-02 07:23:02,663 | INFO     | this job has now completed (state=finished)
[2025-06-02 03:23:21] 2025-06-02 07:23:02,663 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 03:23:21] 2025-06-02 07:23:02,663 | INFO     | log transfer has been attempted: DONE
[2025-06-02 03:23:21] 2025-06-02 07:23:02,663 | INFO     | job 6666054866 has finished - writing final server update
[2025-06-02 03:23:21] 2025-06-02 07:23:02,664 | INFO     | total number of processed events: 400 (read)
[2025-06-02 03:23:21] 2025-06-02 07:23:02,682 | INFO     | executing command: lscpu
[2025-06-02 03:23:21] 2025-06-02 07:23:02,767 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 03:23:21] 2025-06-02 07:23:03,166 | INFO     | monitor loop #286: job 0:6666054866 is in state 'finished'
[2025-06-02 03:23:21] 2025-06-02 07:23:03,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 03:23:21] 2025-06-02 07:23:05,668 | INFO     | monitor loop #287: job 0:6666054866 is in state 'finished'
[2025-06-02 03:23:21] 2025-06-02 07:23:05,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 03:23:21] 2025-06-02 07:23:06,468 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 03:23:21] 2025-06-02 07:23:06,469 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666054866/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 03:23:21] 2025-06-02 07:23:06,469 | INFO     | extracted standard info from prmon json
[2025-06-02 03:23:21] 2025-06-02 07:23:06,469 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 03:23:21] 2025-06-02 07:23:06,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 03:23:21] 2025-06-02 07:23:06,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 03:23:21] 2025-06-02 07:23:06,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | fitting pss+swap vs Time
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | sum of square deviations: 54438230.0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | sum of deviations: -3963369531.0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | mean x: 1748847163.5
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | mean y: 2291103.4285714286
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | -- intersect: 127326922381.69891
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | intersect: 127326922381.69891
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | chi2: 0.11034506849654413
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | -- intersect: 127326922381.69891
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | current memory leak: -72.80 B/s (using 56 data points, chi2=0.11)
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | ..............................
[2025-06-02 03:23:21] 2025-06-02 07:23:06,471 | INFO     | . Timing measurements:
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . get job = 0 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . initial setup = 2 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . payload setup = 8 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . stage-in = 0 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . payload execution = 3795 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . stage-out = 0 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | . log creation = 0 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,472 | INFO     | ..............................
[2025-06-02 03:23:21] 2025-06-02 07:23:06,855 | INFO     | 
[2025-06-02 03:23:21] 2025-06-02 07:23:06,855 | INFO     | job summary report
[2025-06-02 03:23:21] 2025-06-02 07:23:06,855 | INFO     | --------------------------------------------------
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | PanDA job id: 6666054866
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | task id: 44871837
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | errors: (none)
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | pilot state: finished 
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | transexitcode: 0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | exeerrorcode: 0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | exeerrordiag: 
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | exitcode: 0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | exitmsg: OK
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | cpuconsumptiontime: 27626 s
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | nevents: 400
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | neventsw: 0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | pid: 204108
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | pgrp: 204108
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | corecount: 8
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | event service: False
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | sizes: {0: 2405234, 5: 2405440, 11: 2405496, 3807: 2431100, 3809: 2440041, 3811: 2440097, 3818: 2440395}
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | --------------------------------------------------
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | 
[2025-06-02 03:23:21] 2025-06-02 07:23:06,856 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-02 03:23:21] 2025-06-02 07:23:06,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 03:23:21] 2025-06-02 07:23:06,876 | INFO     | job 6666054866 has completed (purged errors)
[2025-06-02 03:23:21] 2025-06-02 07:23:06,876 | INFO     | overall cleanup function is called
[2025-06-02 03:23:21] 2025-06-02 07:23:07,883 | INFO     | --- collectZombieJob: --- 10, [204108]
[2025-06-02 03:23:21] 2025-06-02 07:23:07,883 | INFO     | zombie collector waiting for pid 204108
[2025-06-02 03:23:21] 2025-06-02 07:23:07,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 03:23:21] 2025-06-02 07:23:07,883 | INFO     | collected zombie processes
[2025-06-02 03:23:21] 2025-06-02 07:23:07,883 | INFO     | will attempt to kill all subprocesses of pid=204108
[2025-06-02 03:23:21] 2025-06-02 07:23:08,195 | INFO     | process IDs to be killed: [204108] (in reverse order)
[2025-06-02 03:23:21] 2025-06-02 07:23:08,322 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 03:23:21] 2025-06-02 07:23:08,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 03:23:21] 2025-06-02 07:23:08,341 | INFO     | did not find any defunct processes belonging to 204108
[2025-06-02 03:23:21] 2025-06-02 07:23:08,360 | INFO     | did not find any defunct processes belonging to 204108
[2025-06-02 03:23:21] 2025-06-02 07:23:08,360 | INFO     | ready for new job
[2025-06-02 03:23:21] 2025-06-02 07:23:08,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 03:23:21] 2025-06-02 07:23:08,361 | INFO     | **************************************
[2025-06-02 03:23:21] 2025-06-02 07:23:08,361 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 03:23:21] 2025-06-02 07:23:08,361 | INFO     | **************************************
[2025-06-02 03:23:21] 2025-06-02 07:23:08,361 | INFO     | 
[2025-06-02 03:23:21] 2025-06-02 07:23:08,380 | INFO     | architecture information:
[2025-06-02 03:23:21] 2025-06-02 07:23:08,380 | INFO     | executing command: cat /etc/os-release
[2025-06-02 03:23:21] 2025-06-02 07:23:08,394 | INFO     | cat /etc/os-release:
[2025-06-02 03:23:21] NAME="CentOS Linux"
[2025-06-02 03:23:21] VERSION="7 (Core)"
[2025-06-02 03:23:21] ID="centos"
[2025-06-02 03:23:21] ID_LIKE="rhel fedora"
[2025-06-02 03:23:21] VERSION_ID="7"
[2025-06-02 03:23:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 03:23:21] ANSI_COLOR="0;31"
[2025-06-02 03:23:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 03:23:21] HOME_URL="https://www.centos.org/"
[2025-06-02 03:23:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 03:23:21] 
[2025-06-02 03:23:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 03:23:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 03:23:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 03:23:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 03:23:21] 
[2025-06-02 03:23:21] 2025-06-02 07:23:08,396 | INFO     | **************************************
[2025-06-02 03:23:21] 2025-06-02 07:23:08,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-02 03:23:21] 2025-06-02 07:23:08,913 | INFO     | sufficient remaining disk space (76614205440 B)
[2025-06-02 03:23:21] 2025-06-02 07:23:08,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 03:23:21] 2025-06-02 07:23:08,914 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 03:23:21] 2025-06-02 07:23:08,914 | INFO     | update_server=False
[2025-06-02 03:23:21] 2025-06-02 07:23:08,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 03:23:21] 2025-06-02 07:23:08,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 03:23:21] 2025-06-02 07:23:08,988 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 03:23:21] 2025-06-02 07:23:08,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 03:23:21] 2025-06-02 07:23:08,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 03:23:21] 2025-06-02 07:23:09,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 03:23:21] 2025-06-02 07:23:09,177 | INFO     | aborting loop
[2025-06-02 03:23:21] 2025-06-02 07:23:09,664 | INFO     | all job control threads have been joined
[2025-06-02 03:23:21] 2025-06-02 07:23:09,853 | INFO     | all data control threads have been joined
[2025-06-02 03:23:21] 2025-06-02 07:23:09,919 | INFO     | [job] retrieve thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:09,963 | INFO     | all payload control threads have been joined
[2025-06-02 03:23:21] 2025-06-02 07:23:10,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,182 | INFO     | [job] job monitor thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,249 | INFO     | [payload] validate_post thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,669 | INFO     | [job] control thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,827 | INFO     | [payload] failed_post thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,858 | INFO     | [data] control thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,900 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,906 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,933 | INFO     | [data] copytool_out thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 03:23:21] 2025-06-02 07:23:10,940 | INFO     | [job] validate thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,965 | INFO     | [data] copytool_in thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:10,968 | INFO     | [payload] control thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:11,041 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:11,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 03:23:21] 2025-06-02 07:23:12,540 | INFO     | [job] queue monitor thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:14,945 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 03:23:21] 2025-06-02 07:23:16,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402345215808)>', '<ExcThread(monitor, started 140401860138752)>']
[2025-06-02 03:23:21] 2025-06-02 07:23:17,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 03:23:21] 2025-06-02 07:23:17,028 | INFO     | [monitor] control thread has ended
[2025-06-02 03:23:21] 2025-06-02 07:23:21,424 | INFO     | all workflow threads have been joined
[2025-06-02 03:23:21] 2025-06-02 07:23:21,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 03:23:21] 2025-06-02 07:23:21,425 | INFO     | traces error code: 0
[2025-06-02 03:23:21] 2025-06-02 07:23:21,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 03:23:21] 2025-06-02 07:23:21,543 [wrapper] ==== pilot stdout END ====
[2025-06-02 03:23:21] 2025-06-02 07:23:21,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 03:23:21] 2025-06-02 07:23:21,548 [wrapper] pilotpid: 181040
[2025-06-02 03:23:21] 2025-06-02 07:23:21,550 [wrapper] Pilot exit status: 0
[2025-06-02 03:23:21] 2025-06-02 07:23:21,559 [wrapper] pandaids: 6666054866
[2025-06-02 03:23:21] 2025-06-02 07:23:21,653 [wrapper] cleanup supervisor_pilot  942540 181042
[2025-06-02 03:23:21] 2025-06-02 07:23:21,656 [wrapper] Test setup, not cleaning
[2025-06-02 03:23:21] 2025-06-02 07:23:21,659 [wrapper] apfmon messages muted
[2025-06-02 03:23:21] 2025-06-02 07:23:21,662 [wrapper] ==== wrapper stdout END ====
[2025-06-02 03:23:21] 2025-06-02 07:23:21,665 [wrapper] ==== wrapper stderr END ====
[2025-06-02 03:23:21]  *** Error codes and diagnostics ***
[2025-06-02 03:23:21]     "exeErrorCode": 0,
[2025-06-02 03:23:21]     "exeErrorDiag": "",
[2025-06-02 03:23:21]     "pilotErrorCode": 0,
[2025-06-02 03:23:21]     "pilotErrorDiag": "",
[2025-06-02 03:23:21]  *** Listing of results directory ***
[2025-06-02 03:23:21] total 417436
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas    495897 May 26 12:14 pilot3.tar.gz
[2025-06-02 03:23:21] -rwx------. 1 boincer umatlas     37140 May 26 13:12 runpilot2-wrapper.sh
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas      5111 May 26 13:12 queuedata.json
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas       100 Jun  2 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 03:23:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 02:19 run_atlas
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas       105 Jun  2 02:19 job.xml
[2025-06-02 03:23:21] -rw-r--r--. 2 boincer umatlas 225889624 Jun  2 02:19 EVNT.44871834._002156.pool.root.1
[2025-06-02 03:23:21] -rw-r--r--. 2 boincer umatlas    508875 Jun  2 02:19 input.tar.gz
[2025-06-02 03:23:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 02:19 start_atlas.sh
[2025-06-02 03:23:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 02:19 shared
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas         0 Jun  2 02:19 boinc_lockfile
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  2 02:19 pandaJob.out
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas    988188 Jun  2 02:19 agis_schedconf.cvmfs.json
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas   1603667 Jun  2 02:19 agis_ddmendpoints.agis.ALL.json
[2025-06-02 03:23:21] drwx------. 4 boincer umatlas      4096 Jun  2 02:19 pilot3
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas      7159 Jun  2 03:19 init_data.xml
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas        95 Jun  2 03:22 pilot_heartbeat.json
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas 196334567 Jun  2 03:22 HITS.44871837._054268.pool.root.1
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas       529 Jun  2 03:22 boinc_task_state.xml
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas      1036 Jun  2 03:22 memory_monitor_summary.json
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas    310213 Jun  2 03:22 log.44871837._054268.job.log.tgz.1
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas      7692 Jun  2 03:23 heartbeat.json
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 03:23 boinc_mmap_file
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas        27 Jun  2 03:23 wrapper_checkpoint.txt
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas      4353 Jun  2 03:23 pilotlog.txt
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas    389694 Jun  2 03:23 log.44871837._054268.job.log.1
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas       357 Jun  2 03:23 output.list
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas       620 Jun  2 03:23 runtime_log
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas    716800 Jun  2 03:23 result.tar.gz
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas      8654 Jun  2 03:23 runtime_log.err
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas       651 Jun  2 03:23 LXJLDmgYqd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzUQKDmPAlETn.diag
[2025-06-02 03:23:21] -rw-r--r--. 1 boincer umatlas     21431 Jun  2 03:23 stderr.txt
[2025-06-02 03:23:21] HITS file was successfully produced:
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas 196334567 Jun  2 03:22 shared/HITS.pool.root.1
[2025-06-02 03:23:21]  *** Contents of shared directory: ***
[2025-06-02 03:23:21] total 413548
[2025-06-02 03:23:21] -rw-r--r--. 2 boincer umatlas 225889624 Jun  2 02:19 ATLAS.root_0
[2025-06-02 03:23:21] -rw-r--r--. 2 boincer umatlas    508875 Jun  2 02:19 input.tar.gz
[2025-06-02 03:23:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 02:19 start_atlas.sh
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas 196334567 Jun  2 03:22 HITS.pool.root.1
[2025-06-02 03:23:21] -rw-------. 1 boincer umatlas    716800 Jun  2 03:23 result.tar.gz
03:23:22 (173368): run_atlas exited; CPU time 27700.674491
03:23:22 (173368): called boinc_finish(0)

</stderr_txt>
]]>

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