Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-02 04:19:06 (137964): Detected: vboxwrapper 26206
2025-06-02 04:19:06 (137964): Detected: BOINC client v8.0.2
2025-06-02 04:19:15 (137964): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-02 04:19:15 (137964): Successfully copied 'init_data.xml' to the shared directory.
2025-06-02 04:19:16 (137964): Create VM. (boinc_b9f9e5099c1e1831, slot#2)
2025-06-02 04:19:19 (137964): Setting Memory Size for VM. (4400MB)
2025-06-02 04:19:20 (137964): Setting CPU Count for VM. (4)
2025-06-02 04:19:21 (137964): Setting Chipset Options for VM.
2025-06-02 04:19:23 (137964): Setting Graphics Controller Options for VM.
2025-06-02 04:19:23 (137964): Setting Boot Options for VM.
2025-06-02 04:19:24 (137964): Setting Network Configuration for NAT.
2025-06-02 04:19:25 (137964): Enabling VM Network Access.
2025-06-02 04:19:26 (137964): Disabling USB Support for VM.
2025-06-02 04:19:26 (137964): Disabling COM Port Support for VM.
2025-06-02 04:19:26 (137964): Disabling LPT Port Support for VM.
2025-06-02 04:19:26 (137964): Disabling Audio Support for VM.
2025-06-02 04:19:26 (137964): Disabling Clipboard Support for VM.
2025-06-02 04:19:26 (137964): Disabling Drag and Drop Support for VM.
2025-06-02 04:19:26 (137964): Adding storage controller(s) to VM.
2025-06-02 04:19:26 (137964): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-02 04:19:27 (137964): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-02 04:19:27 (137964): forwarding host port 45361 to guest port 80
2025-06-02 04:19:27 (137964): Enabling remote desktop for VM.
2025-06-02 04:19:27 (137964): Required extension pack not installed, remote desktop not enabled.
2025-06-02 04:19:27 (137964): Enabling shared directory for VM.
2025-06-02 04:19:28 (137964): Starting VM using VBoxManage interface. (boinc_b9f9e5099c1e1831, slot#2)
2025-06-02 04:19:29 (137964): Successfully started VM. (PID = '138465')
2025-06-02 04:19:29 (137964): Reporting VM Process ID to BOINC.
2025-06-02 04:19:29 (137964): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-02 04:19:29 (137964): Guest Log: CPUID EDX: 0x178bfbff
2025-06-02 04:19:29 (137964): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-02 04:19:29 (137964): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-02 04:19:29 (137964): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-02 04:19:29 (137964): Detected: Web Application Enabled (http://localhost:45361)
2025-06-02 04:19:29 (137964): Preference change detected
2025-06-02 04:19:29 (137964): Setting CPU throttle for VM. (100%)
2025-06-02 04:19:29 (137964): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-02 04:19:31 (137964): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-02 04:19:32 (137964): Guest Log: BIOS: Booting from Hard Disk...
2025-06-02 04:20:01 (137964): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-02 04:20:01 (137964): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-02 04:20:01 (137964): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-02 04:21:19 (137964): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-02 04:21:19 (137964): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-02 04:21:45 (137964): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000168 main     Log opened 2025-06-02T02:21:43.836330000Z
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000251 main     OS Product: Linux
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000265 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000276 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000288 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000288 main     Process ID: 1305
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000288 main     Package type: LINUX_64BITS_GENERIC
2025-06-02 04:21:45 (137964): Guest Log: 00:00:00.000825 main     5.2.32 r132073 started. Verbose level = 0
2025-06-02 04:21:45 (137964): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-02 04:21:45 (137964): Guest Log: [INFO] Mounting shared directory
2025-06-02 04:21:46 (137964): Guest Log: [INFO] Checking for init_data.xml
2025-06-02 04:21:51 (137964): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-02 04:21:51 (137964): Guest Log: [INFO] Detected branch: prod
2025-06-02 04:21:51 (137964): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-02 04:21:51 (137964): Guest Log: Copying input files
2025-06-02 04:21:52 (137964): Guest Log: Copied input files into RunAtlas.
2025-06-02 04:21:52 (137964): Guest Log: Detected user-configured HTTP proxy at http://192.168.101.210:3128 - will set in /etc/cvmfs/default.local
2025-06-02 04:22:01 (137964): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-02 04:22:01 (137964): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-02 04:22:01 (137964): Guest Log: 2.6.3.0 1583 0 31644 146690 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 1
2025-06-02 04:22:06 (137964): Guest Log: copied the webapp to /var/www
2025-06-02 04:22:06 (137964): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-02 04:22:06 (137964): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-02 04:22:06 (137964): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-02 04:22:06 (137964): Guest Log:  *** Starting ATLAS job. (PandaID=6667883879 taskID=44871837) ***
2025-06-02 05:56:24 (137964): Preference change detected
2025-06-02 05:56:24 (137964): Setting CPU throttle for VM. (100%)
2025-06-02 05:56:24 (137964): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-02 05:57:01 (137964): Preference change detected
2025-06-02 05:57:01 (137964): Setting CPU throttle for VM. (100%)
2025-06-02 05:57:01 (137964): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-02 05:58:29 (137964): Status Report: Elapsed Time: '6000.000000'
2025-06-02 05:58:29 (137964): Status Report: CPU Time: '21268.660000'
2025-06-02 06:25:53 (137964): Guest Log:  *** Job finished ***
2025-06-02 06:25:53 (137964): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:12,033 | INFO     | [data] queue_monitor thread has finished
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:16,581 | INFO     | job.realtimelogging is not enabled
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:17,582 | INFO     | [payload] run_realtimelog thread has finished
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:18,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591822231360)>', '<ExcThread(monitor, started 140591249745664)>']
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:18,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:18,502 | INFO     | [monitor] control thread has ended
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,214 | INFO     | all workflow threads have been joined
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,215 | INFO     | end of generic workflow (traces error code: 0)
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,215 | INFO     | traces error code: 0
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,367 [wrapper] ==== pilot stdout END ====
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,372 [wrapper] ==== wrapper stdout RESUME ====
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,376 [wrapper] pilotpid: 5890
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,379 [wrapper] Pilot exit status: 0
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,404 [wrapper] pandaids: 6667883879
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,429 [wrapper] cleanup supervisor_pilot  4958 5891
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,433 [wrapper] Test setup, not cleaning
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,437 [wrapper] apfmon messages muted
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,441 [wrapper] ==== wrapper stdout END ====
2025-06-02 06:25:53 (137964): Guest Log: 2025-06-02 04:27:23,445 [wrapper] ==== wrapper stderr END ====
2025-06-02 06:25:53 (137964): Guest Log:  *** Error codes and diagnostics ***
2025-06-02 06:25:53 (137964): Guest Log:     "exeErrorCode": 0,
2025-06-02 06:25:53 (137964): Guest Log:     "exeErrorDiag": "",
2025-06-02 06:25:53 (137964): Guest Log:     "pilotErrorCode": 0,
2025-06-02 06:25:53 (137964): Guest Log:     "pilotErrorDiag": "",
2025-06-02 06:25:53 (137964): Guest Log:  *** Listing of results directory ***
2025-06-02 06:25:53 (137964): Guest Log: total 202484
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 01:31 pilot3.tar.gz
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 01:41 queuedata.json
2025-06-02 06:25:53 (137964): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 01:44 runpilot2-wrapper.sh
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas    508878 Jun  2 02:21 input.tar.gz
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas      9559 Jun  2 02:21 init_data.xml
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  2 02:21 start_atlas.sh
2025-06-02 06:25:53 (137964): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  2 02:21 EVNT.44871834._003006.pool.root.1 -> /data/./ATLAS.root_0
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  2 02:22 pandaJob.out
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas    988188 Jun  2 02:22 agis_schedconf.cvmfs.json
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  2 02:22 agis_ddmendpoints.agis.ALL.json
2025-06-02 06:25:53 (137964): Guest Log: drwx------. 4 atlas atlas      4096 Jun  2 02:22 pilot3
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas 201732136 Jun  2 04:26 HITS.44871837._076840.pool.root.1
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas        95 Jun  2 04:26 pilot_heartbeat.json
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  2 04:26 memory_monitor_summary.json
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas    257888 Jun  2 04:26 log.44871837._076840.job.log.tgz.1
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas      7691 Jun  2 04:27 heartbeat.json
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  2 04:27 pilotlog.txt
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas    660886 Jun  2 04:27 log.44871837._076840.job.log.1
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas       357 Jun  2 04:27 output.list
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  2 04:27 runtime_log
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas    942080 Jun  2 04:27 result.tar.gz
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 atlas atlas      8579 Jun  2 04:27 runtime_log.err
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas       651 Jun  2 04:27 bDtKDmo1Ke7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRkSKDmG87sAo.diag
2025-06-02 06:25:53 (137964): Guest Log: Looking for outputfile HITS.44871837._076840.pool.root.1
2025-06-02 06:25:53 (137964): Guest Log: HITS file was successfully produced
2025-06-02 06:25:53 (137964): Guest Log: -rw-------. 1 atlas atlas 201732136 Jun  2 04:26 /home/atlas/RunAtlas/HITS.44871837._076840.pool.root.1
2025-06-02 06:25:53 (137964): Guest Log: Successfully finished the ATLAS job!
2025-06-02 06:25:53 (137964): Guest Log: Copying the results back to the shared directory!
2025-06-02 06:25:53 (137964): Guest Log:  *** Contents of shared directory: ***
2025-06-02 06:25:53 (137964): Guest Log: total 219452
2025-06-02 06:25:53 (137964): Guest Log: -rw-r--r--. 1 root root 223229863 Jun  2 02:19 ATLAS.root_0
2025-06-02 06:25:54 (137964): Guest Log: -rw-r--r--. 1 root root      9559 Jun  2 02:19 init_data.xml
2025-06-02 06:25:54 (137964): Guest Log: -rw-r--r--. 1 root root    508878 Jun  2 02:19 input.tar.gz
2025-06-02 06:25:54 (137964): Guest Log: -rw-r--r--. 1 root root    942080 Jun  2 04:25 result.tar.gz
2025-06-02 06:25:54 (137964): Guest Log: -rw-r--r--. 1 root root     15093 Jun  2 02:19 start_atlas.sh
2025-06-02 06:25:54 (137964): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-02 06:25:54 (137964): VM Completion File Detected.
2025-06-02 06:25:54 (137964): Powering off VM.
2025-06-02 06:25:54 (137964): Successfully stopped VM.
2025-06-02 06:25:54 (137964): Deregistering VM. (boinc_b9f9e5099c1e1831, slot#2)
2025-06-02 06:25:54 (137964): Removing network bandwidth throttle group from VM.
2025-06-02 06:25:54 (137964): Removing VM from VirtualBox.
06:26:00 (137964): called boinc_finish(0)

</stderr_txt>
]]>

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