Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:05:03 (1583929): wrapper (7.7.26015): starting
09:05:03 (1583929): wrapper: running run_atlas (--nthreads 10)
[2025-06-01 09:05:03] Arguments: --nthreads 10
[2025-06-01 09:05:03] Threads: 10
[2025-06-01 09:05:03] Checking for CVMFS
[2025-06-01 09:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 09:05:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 09:05:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 09:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 09:05:03] 2.12.6.0 1145515 197539 310848 146670 1 31 22822870 32935937 4344 130560 1 338211199 99.599 365336079 27408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-01 09:05:03] CVMFS is ok
[2025-06-01 09:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-01 09:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-01 09:05:03] Further information can be found at the LHC@home message board.
[2025-06-01 09:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 09:05:03] Checking for apptainer binary...
[2025-06-01 09:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 09:05:03] Running /usr/bin/apptainer --version
[2025-06-01 09:05:03] apptainer version 1.4.1-1.el9
[2025-06-01 09:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 09:05:03] c-8-17.aglt2.org
[2025-06-01 09:05:03] apptainer works
[2025-06-01 09:05:03] Set ATHENA_PROC_NUMBER=10
[2025-06-01 09:05:03] Set ATHENA_CORE_NUMBER=10
[2025-06-01 09:05:03] Starting ATLAS job with PandaID=6665936019
[2025-06-01 09:05:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 10:36:31]  *** The last 200 lines of the pilot log: ***
[2025-06-01 10:36:31]  guid=5b6a17a2-8f2d-41a6-8f48-fb2a72f8b8aa
[2025-06-01 10:36:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-01 10:36:31]  is_altstaged=None
[2025-06-01 10:36:31]  is_tar=False
[2025-06-01 10:36:31]  lfn=log.44871837._050852.job.log.tgz.1
[2025-06-01 10:36:31]  mtime=0
[2025-06-01 10:36:31]  protocol_id=None
[2025-06-01 10:36:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-01 10:36:31]  replicas=None
[2025-06-01 10:36:31]  scope=mc23_13p6TeV
[2025-06-01 10:36:31]  status=None
[2025-06-01 10:36:31]  status_code=0
[2025-06-01 10:36:31]  storage_token=
[2025-06-01 10:36:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665936019/log.44871837._050852.job.log.tgz.1
[2025-06-01 10:36:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/51/log.44871837._050852.job.log.tgz.1
[2025-06-01 10:36:31]  workdir=None
[2025-06-01 10:36:31] ]
[2025-06-01 10:36:31] 2025-06-01 14:36:06,946 | INFO     | transferring file log.44871837._050852.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665936019/log.44871837._050852.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-01 10:36:31] 2025-06-01 14:36:06,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665936019/log.44871837._050852.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._050852.job
[2025-06-01 10:36:31] 2025-06-01 14:36:06,958 | INFO     | adding to output.list: log.44871837._050852.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/51/log.44871837._050852.job.log.tg
[2025-06-01 10:36:31] 2025-06-01 14:36:06,959 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-01 10:36:31] 2025-06-01 14:36:06,959 | INFO     | summary of transferred files:
[2025-06-01 10:36:31] 2025-06-01 14:36:06,959 | INFO     |  -- lfn=log.44871837._050852.job.log.tgz.1, status_code=0, status=transferred
[2025-06-01 10:36:31] 2025-06-01 14:36:06,959 | INFO     | stage-out finished correctly
[2025-06-01 10:36:31] 2025-06-01 14:36:07,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-01 10:36:31] 2025-06-01 14:36:09,445 | INFO     | job 6665936019 has state=finished
[2025-06-01 10:36:31] 2025-06-01 14:36:09,445 | INFO     | preparing for final server update for job 6665936019 in state='finished'
[2025-06-01 10:36:31] 2025-06-01 14:36:09,446 | INFO     | this job has now completed (state=finished)
[2025-06-01 10:36:31] 2025-06-01 14:36:09,446 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-01 10:36:31] 2025-06-01 14:36:09,446 | INFO     | log transfer has been attempted: DONE
[2025-06-01 10:36:31] 2025-06-01 14:36:09,446 | INFO     | job 6665936019 has finished - writing final server update
[2025-06-01 10:36:31] 2025-06-01 14:36:09,446 | INFO     | total number of processed events: 400 (read)
[2025-06-01 10:36:31] 2025-06-01 14:36:09,461 | INFO     | executing command: lscpu
[2025-06-01 10:36:31] 2025-06-01 14:36:09,503 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-01 10:36:31] 2025-06-01 14:36:10,799 | WARNING  | process 1594286 can no longer be monitored (due to stat problems) - aborting
[2025-06-01 10:36:31] 2025-06-01 14:36:10,800 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665936019/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 10:36:31] 2025-06-01 14:36:10,978 | INFO     | number of running child processes to parent process 1594286: 1
[2025-06-01 10:36:31] 2025-06-01 14:36:10,978 | INFO     | maximum number of monitored processes: 6
[2025-06-01 10:36:31] 2025-06-01 14:36:12,190 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-01 10:36:31] 2025-06-01 14:36:12,190 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665936019/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 10:36:31] 2025-06-01 14:36:12,191 | INFO     | extracted standard info from prmon json
[2025-06-01 10:36:31] 2025-06-01 14:36:12,191 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 10:36:31] 2025-06-01 14:36:12,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 10:36:31] 2025-06-01 14:36:12,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 10:36:31] 2025-06-01 14:36:12,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 10:36:31] 2025-06-01 14:36:12,193 | INFO     | fitting pss+swap vs Time
[2025-06-01 10:36:31] 2025-06-01 14:36:12,193 | INFO     | sum of square deviations: 170944600.5
[2025-06-01 10:36:31] 2025-06-01 14:36:12,193 | INFO     | sum of deviations: -1552388542.4999995
[2025-06-01 10:36:31] 2025-06-01 14:36:12,193 | INFO     | mean x: 1748785911.5
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | mean y: 2338494.987804878
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | -- intersect: 15883478960.129421
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | intersect: 15883478960.129421
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | chi2: 0.07615547436562739
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | -- intersect: 15883478960.129421
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | current memory leak: -9.08 B/s (using 82 data points, chi2=0.08)
[2025-06-01 10:36:31] 2025-06-01 14:36:12,194 | INFO     | ..............................
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . Timing measurements:
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . get job = 0 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . initial setup = 2 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . payload setup = 5 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . stage-in = 0 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . payload execution = 5430 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . stage-out = 0 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | . log creation = 0 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,195 | INFO     | ..............................
[2025-06-01 10:36:31] 2025-06-01 14:36:12,257 | INFO     | 
[2025-06-01 10:36:31] 2025-06-01 14:36:12,257 | INFO     | job summary report
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | --------------------------------------------------
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | PanDA job id: 6665936019
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | task id: 44871837
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | errors: (none)
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | pilot state: finished 
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | transexitcode: 0
[2025-06-01 10:36:31] 2025-06-01 14:36:12,258 | INFO     | exeerrorcode: 0
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | exeerrordiag: 
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | exitcode: 0
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | exitmsg: OK
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | cpuconsumptiontime: 49904 s
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | nevents: 400
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | neventsw: 0
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | pid: 1594286
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | pgrp: 1594286
[2025-06-01 10:36:31] 2025-06-01 14:36:12,259 | INFO     | corecount: 10
[2025-06-01 10:36:31] 2025-06-01 14:36:12,260 | INFO     | event service: False
[2025-06-01 10:36:31] 2025-06-01 14:36:12,260 | INFO     | sizes: {0: 2405063, 1: 2405262, 4: 2405468, 12: 2405496, 5439: 2431987, 5440: 2441112, 5445: 2441226}
[2025-06-01 10:36:31] 2025-06-01 14:36:12,260 | INFO     | --------------------------------------------------
[2025-06-01 10:36:31] 2025-06-01 14:36:12,260 | INFO     | 
[2025-06-01 10:36:31] 2025-06-01 14:36:12,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-01 10:36:31] 2025-06-01 14:36:12,275 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,275 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 10:36:31] 2025-06-01 14:36:12,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,278 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 10:36:31] 2025-06-01 14:36:12,278 | INFO     | job 6665936019 has completed (purged errors)
[2025-06-01 10:36:31] 2025-06-01 14:36:12,278 | INFO     | overall cleanup function is called
[2025-06-01 10:36:31] 2025-06-01 14:36:12,503 | INFO     | PID=1587653 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-01 10:36:31] 2025-06-01 14:36:12,503 | INFO     | .. there are 6 such processes running
[2025-06-01 10:36:31] 2025-06-01 14:36:13,286 | INFO     | --- collectZombieJob: --- 10, [1594286]
[2025-06-01 10:36:31] 2025-06-01 14:36:13,287 | INFO     | zombie collector waiting for pid 1594286
[2025-06-01 10:36:31] 2025-06-01 14:36:13,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 10:36:31] 2025-06-01 14:36:13,287 | INFO     | collected zombie processes
[2025-06-01 10:36:31] 2025-06-01 14:36:13,287 | INFO     | will attempt to kill all subprocesses of pid=1594286
[2025-06-01 10:36:31] 2025-06-01 14:36:13,474 | INFO     | process IDs to be killed: [1594286] (in reverse order)
[2025-06-01 10:36:31] 2025-06-01 14:36:13,521 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 10:36:31] 2025-06-01 14:36:13,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 10:36:31] 2025-06-01 14:36:13,527 | INFO     | did not find any defunct processes belonging to 1594286
[2025-06-01 10:36:31] 2025-06-01 14:36:13,533 | INFO     | did not find any defunct processes belonging to 1594286
[2025-06-01 10:36:31] 2025-06-01 14:36:13,534 | INFO     | ready for new job
[2025-06-01 10:36:31] 2025-06-01 14:36:13,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 10:36:31] 2025-06-01 14:36:13,536 | INFO     | **************************************
[2025-06-01 10:36:31] 2025-06-01 14:36:13,536 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 10:36:31] 2025-06-01 14:36:13,537 | INFO     | **************************************
[2025-06-01 10:36:31] 2025-06-01 14:36:13,537 | INFO     | 
[2025-06-01 10:36:31] 2025-06-01 14:36:13,550 | INFO     | architecture information:
[2025-06-01 10:36:31] 2025-06-01 14:36:13,550 | INFO     | executing command: cat /etc/os-release
[2025-06-01 10:36:31] 2025-06-01 14:36:13,560 | INFO     | cat /etc/os-release:
[2025-06-01 10:36:31] NAME="CentOS Linux"
[2025-06-01 10:36:31] VERSION="7 (Core)"
[2025-06-01 10:36:31] ID="centos"
[2025-06-01 10:36:31] ID_LIKE="rhel fedora"
[2025-06-01 10:36:31] VERSION_ID="7"
[2025-06-01 10:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 10:36:31] ANSI_COLOR="0;31"
[2025-06-01 10:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 10:36:31] HOME_URL="https://www.centos.org/"
[2025-06-01 10:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 10:36:31] 
[2025-06-01 10:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 10:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 10:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 10:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 10:36:31] 
[2025-06-01 10:36:31] 2025-06-01 14:36:13,561 | INFO     | **************************************
[2025-06-01 10:36:31] 2025-06-01 14:36:14,064 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-01 10:36:31] 2025-06-01 14:36:14,075 | INFO     | sufficient remaining disk space (76482084864 B)
[2025-06-01 10:36:31] 2025-06-01 14:36:14,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 10:36:31] 2025-06-01 14:36:14,075 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 10:36:31] 2025-06-01 14:36:14,076 | INFO     | update_server=False
[2025-06-01 10:36:31] 2025-06-01 14:36:14,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 10:36:31] 2025-06-01 14:36:14,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 10:36:31] 2025-06-01 14:36:14,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 10:36:31] 2025-06-01 14:36:14,289 | INFO     | all payload control threads have been joined
[2025-06-01 10:36:31] 2025-06-01 14:36:14,384 | INFO     | all data control threads have been joined
[2025-06-01 10:36:31] 2025-06-01 14:36:14,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 10:36:31] 2025-06-01 14:36:14,485 | INFO     | aborting loop
[2025-06-01 10:36:31] 2025-06-01 14:36:14,509 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 10:36:31] 2025-06-01 14:36:14,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 10:36:31] 2025-06-01 14:36:14,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 10:36:31] 2025-06-01 14:36:15,007 | INFO     | all job control threads have been joined
[2025-06-01 10:36:31] 2025-06-01 14:36:15,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 10:36:31] 2025-06-01 14:36:15,081 | INFO     | [job] retrieve thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,082 | INFO     | [job] queue monitor thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,120 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,135 | INFO     | [payload] validate_post thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,294 | INFO     | [payload] control thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,390 | INFO     | [data] control thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,446 | INFO     | [data] copytool_in thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,490 | INFO     | [payload] failed_post thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:15,491 | INFO     | [job] job monitor thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:16,012 | INFO     | [job] control thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:16,041 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:16,103 | INFO     | [job] validate thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:16,458 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:17,036 | INFO     | [data] copytool_out thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:18,082 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:25,062 | INFO     | job.realtimelogging is not enabled
[2025-06-01 10:36:31] 2025-06-01 14:36:26,068 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 10:36:31] 2025-06-01 14:36:26,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624297031488)>', '<ExcThread(monitor, started 140623663326976)>']
[2025-06-01 10:36:31] 2025-06-01 14:36:26,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 10:36:31] 2025-06-01 14:36:26,566 | INFO     | [monitor] control thread has ended
[2025-06-01 10:36:31] 2025-06-01 14:36:31,290 | INFO     | all workflow threads have been joined
[2025-06-01 10:36:31] 2025-06-01 14:36:31,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 10:36:31] 2025-06-01 14:36:31,292 | INFO     | traces error code: 0
[2025-06-01 10:36:31] 2025-06-01 14:36:31,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 10:36:31] 2025-06-01 14:36:31,442 [wrapper] ==== pilot stdout END ====
[2025-06-01 10:36:31] 2025-06-01 14:36:31,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 10:36:31] 2025-06-01 14:36:31,446 [wrapper] pilotpid: 1587653
[2025-06-01 10:36:31] 2025-06-01 14:36:31,447 [wrapper] Pilot exit status: 0
[2025-06-01 10:36:31] 2025-06-01 14:36:31,455 [wrapper] pandaids: 6665936019
[2025-06-01 10:36:31] 2025-06-01 14:36:31,488 [wrapper] cleanup supervisor_pilot 1736508 1587654
[2025-06-01 10:36:31] 2025-06-01 14:36:31,490 [wrapper] Test setup, not cleaning
[2025-06-01 10:36:31] 2025-06-01 14:36:31,492 [wrapper] apfmon messages muted
[2025-06-01 10:36:31] 2025-06-01 14:36:31,493 [wrapper] ==== wrapper stdout END ====
[2025-06-01 10:36:31] 2025-06-01 14:36:31,495 [wrapper] ==== wrapper stderr END ====
[2025-06-01 10:36:31]  *** Error codes and diagnostics ***
[2025-06-01 10:36:31]     "exeErrorCode": 0,
[2025-06-01 10:36:31]     "exeErrorDiag": "",
[2025-06-01 10:36:31]     "pilotErrorCode": 0,
[2025-06-01 10:36:31]     "pilotErrorDiag": "",
[2025-06-01 10:36:31]  *** Listing of results directory ***
[2025-06-01 10:36:31] total 414848
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas    495897 May 26 08:05 pilot3.tar.gz
[2025-06-01 10:36:31] -rwx------. 1 boincer umatlas     37140 May 26 08:18 runpilot2-wrapper.sh
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas      5111 May 26 08:18 queuedata.json
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas       100 Jun  1 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 10:36:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  1 09:05 run_atlas
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas       105 Jun  1 09:05 job.xml
[2025-06-01 10:36:31] -rw-r--r--. 2 boincer umatlas 225138503 Jun  1 09:05 EVNT.44871834._002025.pool.root.1
[2025-06-01 10:36:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 09:05 start_atlas.sh
[2025-06-01 10:36:31] drwxrwx--x. 2 boincer umatlas      4096 Jun  1 09:05 shared
[2025-06-01 10:36:31] -rw-r--r--. 2 boincer umatlas    508872 Jun  1 09:05 input.tar.gz
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas         0 Jun  1 09:05 boinc_lockfile
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas      2559 Jun  1 09:05 pandaJob.out
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas    988196 Jun  1 09:05 agis_schedconf.cvmfs.json
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas   1603667 Jun  1 09:05 agis_ddmendpoints.agis.ALL.json
[2025-06-01 10:36:31] drwx------. 4 boincer umatlas      4096 Jun  1 09:05 pilot3
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas      6674 Jun  1 10:28 init_data.xml
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas       529 Jun  1 10:35 boinc_task_state.xml
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas 194057222 Jun  1 10:35 HITS.44871837._050852.pool.root.1
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas        95 Jun  1 10:35 pilot_heartbeat.json
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas      1042 Jun  1 10:36 memory_monitor_summary.json
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas      8192 Jun  1 10:36 boinc_mmap_file
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas        27 Jun  1 10:36 wrapper_checkpoint.txt
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas    353722 Jun  1 10:36 log.44871837._050852.job.log.tgz.1
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas      7702 Jun  1 10:36 heartbeat.json
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas      4425 Jun  1 10:36 pilotlog.txt
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas    530963 Jun  1 10:36 log.44871837._050852.job.log.1
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas       357 Jun  1 10:36 output.list
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas       620 Jun  1 10:36 runtime_log
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas    901120 Jun  1 10:36 result.tar.gz
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas      8651 Jun  1 10:36 runtime_log.err
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas       651 Jun  1 10:36 RkALDmCyld7n9Rq4apOajLDm4fhM0noT9bVof3QYDmC8PKDmwLHlqm.diag
[2025-06-01 10:36:31] -rw-r--r--. 1 boincer umatlas     21357 Jun  1 10:36 stderr.txt
[2025-06-01 10:36:31] HITS file was successfully produced:
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas 194057222 Jun  1 10:35 shared/HITS.pool.root.1
[2025-06-01 10:36:31]  *** Contents of shared directory: ***
[2025-06-01 10:36:31] total 410780
[2025-06-01 10:36:31] -rw-r--r--. 2 boincer umatlas 225138503 Jun  1 09:05 ATLAS.root_0
[2025-06-01 10:36:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 09:05 start_atlas.sh
[2025-06-01 10:36:31] -rw-r--r--. 2 boincer umatlas    508872 Jun  1 09:05 input.tar.gz
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas 194057222 Jun  1 10:35 HITS.pool.root.1
[2025-06-01 10:36:31] -rw-------. 1 boincer umatlas    901120 Jun  1 10:36 result.tar.gz
10:36:32 (1583929): run_atlas exited; CPU time 50018.697025
10:36:32 (1583929): called boinc_finish(0)

</stderr_txt>
]]>

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