Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:29:11 (693559): wrapper (7.7.26015): starting
07:29:11 (693559): wrapper: running run_atlas (--nthreads 10)
[2025-06-01 07:29:11] Arguments: --nthreads 10
[2025-06-01 07:29:11] Threads: 10
[2025-06-01 07:29:11] Checking for CVMFS
[2025-06-01 07:29:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 07:29:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 07:29:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 07:29:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 07:29:11] 2.12.6.0 41504 34128 444036 146669 3 199 20359872 32935937 9611 16776704 0 141134552 99.675 116946166 12047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-01 07:29:11] CVMFS is ok
[2025-06-01 07:29:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-01 07:29:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-01 07:29:11] Further information can be found at the LHC@home message board.
[2025-06-01 07:29:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 07:29:11] Checking for apptainer binary...
[2025-06-01 07:29:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 07:29:11] Running /usr/bin/apptainer --version
[2025-06-01 07:29:11] apptainer version 1.4.1-1.el9
[2025-06-01 07:29:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 07:29:12] c-5-4.aglt2.org
[2025-06-01 07:29:12] apptainer works
[2025-06-01 07:29:12] Set ATHENA_PROC_NUMBER=10
[2025-06-01 07:29:12] Set ATHENA_CORE_NUMBER=10
[2025-06-01 07:29:12] Starting ATLAS job with PandaID=6665632202
[2025-06-01 07:29:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 12:44:09]  *** The last 200 lines of the pilot log: ***
[2025-06-01 12:44:09] 2025-06-01 16:43:44,863 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-01 12:44:09] 2025-06-01 16:43:47,680 | INFO     | PID=697275 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-01 12:44:09] 2025-06-01 16:43:47,680 | INFO     | .. there are 11 such processes running
[2025-06-01 12:44:09] 2025-06-01 16:43:47,952 | WARNING  | process 709434 can no longer be monitored (due to stat problems) - aborting
[2025-06-01 12:44:09] 2025-06-01 16:43:47,953 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665632202/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 12:44:09] 2025-06-01 16:43:48,254 | INFO     | number of running child processes to parent process 709434: 1
[2025-06-01 12:44:09] 2025-06-01 16:43:48,255 | INFO     | maximum number of monitored processes: 6
[2025-06-01 12:44:09] 2025-06-01 16:43:49,053 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-01 12:44:09] 2025-06-01 16:43:49,053 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665632202/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,054 | INFO     | extracted standard info from prmon json
[2025-06-01 12:44:09] 2025-06-01 16:43:49,054 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 12:44:09] 2025-06-01 16:43:49,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 12:44:09] 2025-06-01 16:43:49,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 12:44:09] 2025-06-01 16:43:49,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 12:44:09] 2025-06-01 16:43:49,061 | INFO     | fitting pss+swap vs Time
[2025-06-01 12:44:09] 2025-06-01 16:43:49,062 | INFO     | sum of square deviations: 9149167329.32688
[2025-06-01 12:44:09] 2025-06-01 16:43:49,065 | INFO     | sum of deviations: -48893815913.06149
[2025-06-01 12:44:09] 2025-06-01 16:43:49,065 | INFO     | mean x: 1748786821.789644
[2025-06-01 12:44:09] 2025-06-01 16:43:49,065 | INFO     | mean y: 2261790.1682847897
[2025-06-01 12:44:09] 2025-06-01 16:43:49,065 | INFO     | -- intersect: 9347905809.782196
[2025-06-01 12:44:09] 2025-06-01 16:43:49,065 | INFO     | intersect: 9347905809.782196
[2025-06-01 12:44:09] 2025-06-01 16:43:49,066 | INFO     | chi2: 3.8746122006414225
[2025-06-01 12:44:09] 2025-06-01 16:43:49,066 | INFO     | sum of square deviations: 8712284716.157907
[2025-06-01 12:44:09] 2025-06-01 16:43:49,069 | INFO     | sum of deviations: -20607194946.97367
[2025-06-01 12:44:09] 2025-06-01 16:43:49,069 | INFO     | mean x: 1748786669.3026316
[2025-06-01 12:44:09] 2025-06-01 16:43:49,069 | INFO     | mean y: 2271607.4671052634
[2025-06-01 12:44:09] 2025-06-01 16:43:49,069 | INFO     | -- intersect: 4138682318.2135487
[2025-06-01 12:44:09] 2025-06-01 16:43:49,070 | INFO     | intersect: 4138682318.2135487
[2025-06-01 12:44:09] 2025-06-01 16:43:49,070 | INFO     | chi2: 3.168570598836865
[2025-06-01 12:44:09] 2025-06-01 16:43:49,070 | INFO     | current chi2=3.168570598836865 (change=18.222252066611365 %)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,070 | INFO     | right removable region: 303
[2025-06-01 12:44:09] 2025-06-01 16:43:49,071 | INFO     | sum of square deviations: 8712135876.15791
[2025-06-01 12:44:09] 2025-06-01 16:43:49,073 | INFO     | sum of deviations: -111830664822.02634
[2025-06-01 12:44:09] 2025-06-01 16:43:49,074 | INFO     | mean x: 1748786974.3026316
[2025-06-01 12:44:09] 2025-06-01 16:43:49,074 | INFO     | mean y: 2283697.2828947366
[2025-06-01 12:44:09] 2025-06-01 16:43:49,074 | INFO     | -- intersect: 22450052275.314938
[2025-06-01 12:44:09] 2025-06-01 16:43:49,074 | INFO     | intersect: 22450052275.314938
[2025-06-01 12:44:09] 2025-06-01 16:43:49,075 | INFO     | chi2: 1.7315246678400475
[2025-06-01 12:44:09] 2025-06-01 16:43:49,075 | INFO     | current chi2=1.7315246678400475 (change=55.31102009245203 %)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,075 | INFO     | sum of square deviations: 8289244222.882946
[2025-06-01 12:44:09] 2025-06-01 16:43:49,078 | INFO     | sum of deviations: -122958558291.07684
[2025-06-01 12:44:09] 2025-06-01 16:43:49,078 | INFO     | mean x: 1748787126.8160536
[2025-06-01 12:44:09] 2025-06-01 16:43:49,078 | INFO     | mean y: 2287664.3076923075
[2025-06-01 12:44:09] 2025-06-01 16:43:49,078 | INFO     | -- intersect: 25942932925.75362
[2025-06-01 12:44:09] 2025-06-01 16:43:49,078 | INFO     | intersect: 25942932925.75362
[2025-06-01 12:44:09] 2025-06-01 16:43:49,079 | INFO     | chi2: 1.5307287386559363
[2025-06-01 12:44:09] 2025-06-01 16:43:49,079 | INFO     | current chi2=1.5307287386559363 (change=11.59648100391141 %)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,079 | INFO     | left removable region: 20
[2025-06-01 12:44:09] 2025-06-01 16:43:49,080 | INFO     | sum of square deviations: 7028480107.625461
[2025-06-01 12:44:09] 2025-06-01 16:43:49,082 | INFO     | sum of deviations: -64121330535.90457
[2025-06-01 12:44:09] 2025-06-01 16:43:49,082 | INFO     | mean x: 1748787248.8621907
[2025-06-01 12:44:09] 2025-06-01 16:43:49,082 | INFO     | mean y: 2286803.2332155476
[2025-06-01 12:44:09] 2025-06-01 16:43:49,082 | INFO     | -- intersect: 15956598902.602858
[2025-06-01 12:44:09] 2025-06-01 16:43:49,082 | INFO     | intersect: 15956598902.602858
[2025-06-01 12:44:09] 2025-06-01 16:43:49,083 | INFO     | chi2: 0.7094361493946698
[2025-06-01 12:44:09] 2025-06-01 16:43:49,083 | INFO     | -- intersect: 15956598902.602858
[2025-06-01 12:44:09] 2025-06-01 16:43:49,083 | INFO     | current memory leak: -9.12 B/s (using 283 data points, chi2=0.71)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | ..............................
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | . Timing measurements:
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | . get job = 0 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | . initial setup = 5 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | . payload setup = 11 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | . stage-in = 0 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,084 | INFO     | . payload execution = 18799 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,085 | INFO     | . stage-out = 2 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,085 | INFO     | . log creation = 0 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,085 | INFO     | ..............................
[2025-06-01 12:44:09] 2025-06-01 16:43:49,192 | INFO     | 
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | job summary report
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | --------------------------------------------------
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | PanDA job id: 6665632202
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | task id: 44871837
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | errors: (none)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 12:44:09] 2025-06-01 16:43:49,193 | INFO     | pilot state: finished 
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | transexitcode: 0
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | exeerrorcode: 0
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | exeerrordiag: 
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | exitcode: 0
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | exitmsg: OK
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | cpuconsumptiontime: 62956 s
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | nevents: 400
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | neventsw: 0
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | pid: 709434
[2025-06-01 12:44:09] 2025-06-01 16:43:49,194 | INFO     | pgrp: 709434
[2025-06-01 12:44:09] 2025-06-01 16:43:49,195 | INFO     | corecount: 10
[2025-06-01 12:44:09] 2025-06-01 16:43:49,195 | INFO     | event service: False
[2025-06-01 12:44:09] 2025-06-01 16:43:49,195 | INFO     | sizes: {0: 2405061, 1: 2405260, 2: 2405260, 3: 2405288, 14: 2405550, 24: 2405550, 18815: 2437814, 18817: 2446811, 18822: 2446925}
[2025-06-01 12:44:09] 2025-06-01 16:43:49,195 | INFO     | --------------------------------------------------
[2025-06-01 12:44:09] 2025-06-01 16:43:49,195 | INFO     | 
[2025-06-01 12:44:09] 2025-06-01 16:43:49,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-01 12:44:09] 2025-06-01 16:43:49,213 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,216 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 12:44:09] 2025-06-01 16:43:49,216 | INFO     | job 6665632202 has completed (purged errors)
[2025-06-01 12:44:09] 2025-06-01 16:43:49,216 | INFO     | overall cleanup function is called
[2025-06-01 12:44:09] 2025-06-01 16:43:50,225 | INFO     | --- collectZombieJob: --- 10, [709434]
[2025-06-01 12:44:09] 2025-06-01 16:43:50,225 | INFO     | zombie collector waiting for pid 709434
[2025-06-01 12:44:09] 2025-06-01 16:43:50,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 12:44:09] 2025-06-01 16:43:50,225 | INFO     | collected zombie processes
[2025-06-01 12:44:09] 2025-06-01 16:43:50,225 | INFO     | will attempt to kill all subprocesses of pid=709434
[2025-06-01 12:44:09] 2025-06-01 16:43:50,554 | INFO     | process IDs to be killed: [709434] (in reverse order)
[2025-06-01 12:44:09] 2025-06-01 16:43:50,654 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 12:44:09] 2025-06-01 16:43:50,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 12:44:09] 2025-06-01 16:43:50,667 | INFO     | did not find any defunct processes belonging to 709434
[2025-06-01 12:44:09] 2025-06-01 16:43:50,679 | INFO     | did not find any defunct processes belonging to 709434
[2025-06-01 12:44:09] 2025-06-01 16:43:50,679 | INFO     | ready for new job
[2025-06-01 12:44:09] 2025-06-01 16:43:50,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 12:44:09] 2025-06-01 16:43:50,682 | INFO     | **************************************
[2025-06-01 12:44:09] 2025-06-01 16:43:50,682 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 12:44:09] 2025-06-01 16:43:50,682 | INFO     | **************************************
[2025-06-01 12:44:09] 2025-06-01 16:43:50,683 | INFO     | 
[2025-06-01 12:44:09] 2025-06-01 16:43:50,696 | INFO     | architecture information:
[2025-06-01 12:44:09] 2025-06-01 16:43:50,696 | INFO     | executing command: cat /etc/os-release
[2025-06-01 12:44:09] 2025-06-01 16:43:50,709 | INFO     | cat /etc/os-release:
[2025-06-01 12:44:09] NAME="CentOS Linux"
[2025-06-01 12:44:09] VERSION="7 (Core)"
[2025-06-01 12:44:09] ID="centos"
[2025-06-01 12:44:09] ID_LIKE="rhel fedora"
[2025-06-01 12:44:09] VERSION_ID="7"
[2025-06-01 12:44:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 12:44:09] ANSI_COLOR="0;31"
[2025-06-01 12:44:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 12:44:09] HOME_URL="https://www.centos.org/"
[2025-06-01 12:44:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 12:44:09] 
[2025-06-01 12:44:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 12:44:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 12:44:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 12:44:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 12:44:09] 
[2025-06-01 12:44:09] 2025-06-01 16:43:50,710 | INFO     | **************************************
[2025-06-01 12:44:09] 2025-06-01 16:43:51,212 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-01 12:44:09] 2025-06-01 16:43:51,227 | INFO     | sufficient remaining disk space (76560728064 B)
[2025-06-01 12:44:09] 2025-06-01 16:43:51,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 12:44:09] 2025-06-01 16:43:51,228 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 12:44:09] 2025-06-01 16:43:51,228 | INFO     | update_server=False
[2025-06-01 12:44:09] 2025-06-01 16:43:51,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 12:44:09] 2025-06-01 16:43:51,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 12:44:09] 2025-06-01 16:43:51,488 | INFO     | all data control threads have been joined
[2025-06-01 12:44:09] 2025-06-01 16:43:51,687 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 12:44:09] 2025-06-01 16:43:51,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 12:44:09] 2025-06-01 16:43:51,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 12:44:09] 2025-06-01 16:43:51,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 12:44:09] 2025-06-01 16:43:51,762 | INFO     | aborting loop
[2025-06-01 12:44:09] 2025-06-01 16:43:51,988 | INFO     | all payload control threads have been joined
[2025-06-01 12:44:09] 2025-06-01 16:43:52,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 12:44:09] 2025-06-01 16:43:52,233 | INFO     | [job] retrieve thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,336 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,367 | INFO     | [job] validate thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,405 | INFO     | all job control threads have been joined
[2025-06-01 12:44:09] 2025-06-01 16:43:52,432 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,493 | INFO     | [data] control thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,499 | INFO     | [payload] validate_post thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,767 | INFO     | [job] job monitor thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:52,993 | INFO     | [payload] control thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:53,282 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:53,316 | INFO     | [payload] failed_post thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:53,415 | INFO     | [job] control thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:53,682 | INFO     | [data] copytool_in thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:54,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 12:44:09] 2025-06-01 16:43:54,227 | INFO     | [data] copytool_out thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:55,209 | INFO     | [job] queue monitor thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:43:55,236 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:44:02,026 | INFO     | job.realtimelogging is not enabled
[2025-06-01 12:44:09] 2025-06-01 16:44:03,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 12:44:09] 2025-06-01 16:44:04,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490413586240)>', '<ExcThread(monitor, started 140490139735808)>']
[2025-06-01 12:44:09] 2025-06-01 16:44:04,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 12:44:09] 2025-06-01 16:44:04,757 | INFO     | [monitor] control thread has ended
[2025-06-01 12:44:09] 2025-06-01 16:44:09,260 | INFO     | all workflow threads have been joined
[2025-06-01 12:44:09] 2025-06-01 16:44:09,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 12:44:09] 2025-06-01 16:44:09,260 | INFO     | traces error code: 0
[2025-06-01 12:44:09] 2025-06-01 16:44:09,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 12:44:09] 2025-06-01 16:44:09,418 [wrapper] ==== pilot stdout END ====
[2025-06-01 12:44:09] 2025-06-01 16:44:09,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 12:44:09] 2025-06-01 16:44:09,424 [wrapper] pilotpid: 697275
[2025-06-01 12:44:09] 2025-06-01 16:44:09,426 [wrapper] Pilot exit status: 0
[2025-06-01 12:44:09] 2025-06-01 16:44:09,441 [wrapper] pandaids: 6665632202
[2025-06-01 12:44:09] 2025-06-01 16:44:09,504 [wrapper] cleanup supervisor_pilot 2502557 697276
[2025-06-01 12:44:09] 2025-06-01 16:44:09,508 [wrapper] Test setup, not cleaning
[2025-06-01 12:44:09] 2025-06-01 16:44:09,512 [wrapper] apfmon messages muted
[2025-06-01 12:44:09] 2025-06-01 16:44:09,515 [wrapper] ==== wrapper stdout END ====
[2025-06-01 12:44:09] 2025-06-01 16:44:09,518 [wrapper] ==== wrapper stderr END ====
[2025-06-01 12:44:09]  *** Error codes and diagnostics ***
[2025-06-01 12:44:09]     "exeErrorCode": 0,
[2025-06-01 12:44:09]     "exeErrorDiag": "",
[2025-06-01 12:44:09]     "pilotErrorCode": 0,
[2025-06-01 12:44:09]     "pilotErrorDiag": "",
[2025-06-01 12:44:09]  *** Listing of results directory ***
[2025-06-01 12:44:09] total 424096
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas    495897 May 24 12:09 pilot3.tar.gz
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas      5111 May 24 12:15 queuedata.json
[2025-06-01 12:44:09] -rwx------. 1 boincer umatlas     37140 May 24 12:15 runpilot2-wrapper.sh
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas       100 Jun  1 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 12:44:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  1 07:29 run_atlas
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas       105 Jun  1 07:29 job.xml
[2025-06-01 12:44:09] -rw-r--r--. 2 boincer umatlas 226612160 Jun  1 07:29 EVNT.44871834._000803.pool.root.1
[2025-06-01 12:44:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 07:29 start_atlas.sh
[2025-06-01 12:44:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  1 07:29 shared
[2025-06-01 12:44:09] -rw-r--r--. 2 boincer umatlas    508873 Jun  1 07:29 input.tar.gz
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas         0 Jun  1 07:29 boinc_lockfile
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas      2558 Jun  1 07:29 pandaJob.out
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas    988196 Jun  1 07:29 agis_schedconf.cvmfs.json
[2025-06-01 12:44:09] drwx------. 4 boincer umatlas      4096 Jun  1 07:29 pilot3
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas      6657 Jun  1 12:37 init_data.xml
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas 199934978 Jun  1 12:43 HITS.44871837._020125.pool.root.1
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas        95 Jun  1 12:43 pilot_heartbeat.json
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas       531 Jun  1 12:43 boinc_task_state.xml
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas      1043 Jun  1 12:43 memory_monitor_summary.json
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas   1603667 Jun  1 12:43 agis_ddmendpoints.agis.ALL.json
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas    447299 Jun  1 12:43 log.44871837._020125.job.log.tgz.1
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas      7721 Jun  1 12:43 heartbeat.json
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  1 12:43 boinc_mmap_file
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas        28 Jun  1 12:43 wrapper_checkpoint.txt
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas      4425 Jun  1 12:44 pilotlog.txt
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas   1497546 Jun  1 12:44 log.44871837._020125.job.log.1
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas       357 Jun  1 12:44 output.list
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas       620 Jun  1 12:44 runtime_log
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas   1966080 Jun  1 12:44 result.tar.gz
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas      8647 Jun  1 12:44 runtime_log.err
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas       654 Jun  1 12:44 O9oKDm0h6c7n9Rq4apOajLDm4fhM0noT9bVof3QYDm00MKDmucctgn.diag
[2025-06-01 12:44:09] -rw-r--r--. 1 boincer umatlas     21298 Jun  1 12:44 stderr.txt
[2025-06-01 12:44:09] HITS file was successfully produced:
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas 199934978 Jun  1 12:43 shared/HITS.pool.root.1
[2025-06-01 12:44:09]  *** Contents of shared directory: ***
[2025-06-01 12:44:09] total 418992
[2025-06-01 12:44:09] -rw-r--r--. 2 boincer umatlas 226612160 Jun  1 07:29 ATLAS.root_0
[2025-06-01 12:44:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 07:29 start_atlas.sh
[2025-06-01 12:44:09] -rw-r--r--. 2 boincer umatlas    508873 Jun  1 07:29 input.tar.gz
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas 199934978 Jun  1 12:43 HITS.pool.root.1
[2025-06-01 12:44:09] -rw-------. 1 boincer umatlas   1966080 Jun  1 12:44 result.tar.gz
12:44:11 (693559): run_atlas exited; CPU time 63495.399376
12:44:11 (693559): called boinc_finish(0)

</stderr_txt>
]]>

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