Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:50 (2702109): wrapper (7.7.26015): starting
05:46:50 (2702109): wrapper: running run_atlas (--nthreads 8)
[2025-06-01 05:46:50] Arguments: --nthreads 8
[2025-06-01 05:46:50] Threads: 8
[2025-06-01 05:46:50] Checking for CVMFS
[2025-06-01 05:46:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 05:46:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 05:46:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 05:46:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 05:46:53] 2.12.6.0 5779 26924 316368 146665 0 73 23923299 32935936 25122 16776704 3 73574811 99.612 78894909 10322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-01 05:46:53] CVMFS is ok
[2025-06-01 05:46:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-01 05:46:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-01 05:46:53] Further information can be found at the LHC@home message board.
[2025-06-01 05:46:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 05:46:53] Checking for apptainer binary...
[2025-06-01 05:46:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 05:46:53] Running /usr/bin/apptainer --version
[2025-06-01 05:46:53] apptainer version 1.4.1-1.el9
[2025-06-01 05:46:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 05:46:54] c6-12-25-2.aglt2.org
[2025-06-01 05:46:54] apptainer works
[2025-06-01 05:46:54] Set ATHENA_PROC_NUMBER=8
[2025-06-01 05:46:54] Set ATHENA_CORE_NUMBER=8
[2025-06-01 05:46:55] Starting ATLAS job with PandaID=6665279944
[2025-06-01 05:46:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:27:16 (344996): wrapper (7.7.26015): starting
13:27:16 (344996): wrapper: running run_atlas (--nthreads 8)
[2025-06-01 13:27:16] Arguments: --nthreads 8
[2025-06-01 13:27:16] Threads: 8
[2025-06-01 13:27:16] This job has been restarted, cleaning up previous attempt
[2025-06-01 13:27:16] Checking for CVMFS
[2025-06-01 13:27:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 13:27:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 13:27:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 13:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 13:27:17] 2.12.6.0 5779 27385 312844 146677 1 154 29759008 32935937 21566 16776704 3 74158048 99.607 79798635 10294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-01 13:27:17] CVMFS is ok
[2025-06-01 13:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-01 13:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-01 13:27:17] Further information can be found at the LHC@home message board.
[2025-06-01 13:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 13:27:17] Checking for apptainer binary...
[2025-06-01 13:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 13:27:17] Running /usr/bin/apptainer --version
[2025-06-01 13:27:17] apptainer version 1.4.1-1.el9
[2025-06-01 13:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 13:27:18] c6-12-25-2.aglt2.org
[2025-06-01 13:27:18] apptainer works
[2025-06-01 13:27:18] Set ATHENA_PROC_NUMBER=8
[2025-06-01 13:27:18] Set ATHENA_CORE_NUMBER=8
[2025-06-01 13:27:18] Starting ATLAS job with PandaID=6665279944
[2025-06-01 13:27:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 19:33:49]  *** The last 200 lines of the pilot log: ***
[2025-06-01 19:33:49] 2025-06-01 23:33:26,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 19:33:49] 2025-06-01 23:33:29,186 | INFO     | monitor loop #1182: job 0:6665279944 is in state 'finished'
[2025-06-01 19:33:49] 2025-06-01 23:33:29,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 19:33:49] 2025-06-01 23:33:31,696 | INFO     | monitor loop #1183: job 0:6665279944 is in state 'finished'
[2025-06-01 19:33:49] 2025-06-01 23:33:31,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,058 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-01 19:33:49] 2025-06-01 23:33:33,059 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665279944/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,060 | INFO     | extracted standard info from prmon json
[2025-06-01 19:33:49] 2025-06-01 23:33:33,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 19:33:49] 2025-06-01 23:33:33,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 19:33:49] 2025-06-01 23:33:33,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 19:33:49] 2025-06-01 23:33:33,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 19:33:49] 2025-06-01 23:33:33,080 | INFO     | fitting pss+swap vs Time
[2025-06-01 19:33:49] 2025-06-01 23:33:33,082 | INFO     | sum of square deviations: 14347419185.699232
[2025-06-01 19:33:49] 2025-06-01 23:33:33,090 | INFO     | sum of deviations: 59560397370.42062
[2025-06-01 19:33:49] 2025-06-01 23:33:33,091 | INFO     | mean x: 1748809829.2757661
[2025-06-01 19:33:49] 2025-06-01 23:33:33,091 | INFO     | mean y: 2163806.197771588
[2025-06-01 19:33:49] 2025-06-01 23:33:33,091 | INFO     | -- intersect: -7257665087.683241
[2025-06-01 19:33:49] 2025-06-01 23:33:33,092 | INFO     | intersect: -7257665087.683241
[2025-06-01 19:33:49] 2025-06-01 23:33:33,093 | INFO     | chi2: 3.6033680716172594
[2025-06-01 19:33:49] 2025-06-01 23:33:33,095 | INFO     | sum of square deviations: 13756303412.813587
[2025-06-01 19:33:49] 2025-06-01 23:33:33,105 | INFO     | sum of deviations: 81397180708.06775
[2025-06-01 19:33:49] 2025-06-01 23:33:33,105 | INFO     | mean x: 1748809676.779661
[2025-06-01 19:33:49] 2025-06-01 23:33:33,106 | INFO     | mean y: 2169387.5649717515
[2025-06-01 19:33:49] 2025-06-01 23:33:33,106 | INFO     | -- intersect: -10345681558.51539
[2025-06-01 19:33:49] 2025-06-01 23:33:33,106 | INFO     | intersect: -10345681558.51539
[2025-06-01 19:33:49] 2025-06-01 23:33:33,107 | INFO     | chi2: 2.9426463474264875
[2025-06-01 19:33:49] 2025-06-01 23:33:33,108 | INFO     | current chi2=2.9426463474264875 (change=18.3362263043594 %)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,108 | INFO     | right removable region: 353
[2025-06-01 19:33:49] 2025-06-01 23:33:33,109 | INFO     | sum of square deviations: 13756243022.81359
[2025-06-01 19:33:49] 2025-06-01 23:33:33,118 | INFO     | sum of deviations: -12995158242.813557
[2025-06-01 19:33:49] 2025-06-01 23:33:33,118 | INFO     | mean x: 1748809981.779661
[2025-06-01 19:33:49] 2025-06-01 23:33:33,118 | INFO     | mean y: 2182477.3870056495
[2025-06-01 19:33:49] 2025-06-01 23:33:33,119 | INFO     | -- intersect: 1654236923.659094
[2025-06-01 19:33:49] 2025-06-01 23:33:33,119 | INFO     | intersect: 1654236923.659094
[2025-06-01 19:33:49] 2025-06-01 23:33:33,120 | INFO     | chi2: 1.4301660834102645
[2025-06-01 19:33:49] 2025-06-01 23:33:33,121 | INFO     | current chi2=1.4301660834102645 (change=60.31029706137184 %)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,122 | INFO     | sum of square deviations: 13181532284.916885
[2025-06-01 19:33:49] 2025-06-01 23:33:33,133 | INFO     | sum of deviations: -38822345548.206314
[2025-06-01 19:33:49] 2025-06-01 23:33:33,134 | INFO     | mean x: 1748810134.2836676
[2025-06-01 19:33:49] 2025-06-01 23:33:33,134 | INFO     | mean y: 2189320.911174785
[2025-06-01 19:33:49] 2025-06-01 23:33:33,134 | INFO     | -- intersect: 5152797752.758878
[2025-06-01 19:33:49] 2025-06-01 23:33:33,134 | INFO     | intersect: 5152797752.758878
[2025-06-01 19:33:49] 2025-06-01 23:33:33,137 | INFO     | chi2: 1.15801733045755
[2025-06-01 19:33:49] 2025-06-01 23:33:33,137 | INFO     | current chi2=1.15801733045755 (change=19.029171234698097 %)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,138 | INFO     | left removable region: 20
[2025-06-01 19:33:49] 2025-06-01 23:33:33,139 | INFO     | sum of square deviations: 11450469159.567606
[2025-06-01 19:33:49] 2025-06-01 23:33:33,146 | INFO     | sum of deviations: -24884477960.918934
[2025-06-01 19:33:49] 2025-06-01 23:33:33,147 | INFO     | mean x: 1748810256.2972972
[2025-06-01 19:33:49] 2025-06-01 23:33:33,147 | INFO     | mean y: 2199105.2012012014
[2025-06-01 19:33:49] 2025-06-01 23:33:33,147 | INFO     | -- intersect: 3802762180.3217344
[2025-06-01 19:33:49] 2025-06-01 23:33:33,148 | INFO     | intersect: 3802762180.3217344
[2025-06-01 19:33:49] 2025-06-01 23:33:33,149 | INFO     | chi2: 0.4306556957532804
[2025-06-01 19:33:49] 2025-06-01 23:33:33,149 | INFO     | -- intersect: 3802762180.3217344
[2025-06-01 19:33:49] 2025-06-01 23:33:33,150 | INFO     | current memory leak: -2.17 B/s (using 333 data points, chi2=0.43)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,151 | INFO     | ..............................
[2025-06-01 19:33:49] 2025-06-01 23:33:33,151 | INFO     | . Timing measurements:
[2025-06-01 19:33:49] 2025-06-01 23:33:33,152 | INFO     | . get job = 0 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,152 | INFO     | . initial setup = 3 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,152 | INFO     | . payload setup = 16 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,152 | INFO     | . stage-in = 0 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,152 | INFO     | . payload execution = 21885 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,153 | INFO     | . stage-out = 4 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,153 | INFO     | . log creation = 0 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,153 | INFO     | ..............................
[2025-06-01 19:33:49] 2025-06-01 23:33:33,469 | INFO     | 
[2025-06-01 19:33:49] 2025-06-01 23:33:33,470 | INFO     | job summary report
[2025-06-01 19:33:49] 2025-06-01 23:33:33,470 | INFO     | --------------------------------------------------
[2025-06-01 19:33:49] 2025-06-01 23:33:33,470 | INFO     | PanDA job id: 6665279944
[2025-06-01 19:33:49] 2025-06-01 23:33:33,470 | INFO     | task id: 44871837
[2025-06-01 19:33:49] 2025-06-01 23:33:33,470 | INFO     | errors: (none)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 19:33:49] 2025-06-01 23:33:33,471 | INFO     | pilot state: finished 
[2025-06-01 19:33:49] 2025-06-01 23:33:33,471 | INFO     | transexitcode: 0
[2025-06-01 19:33:49] 2025-06-01 23:33:33,471 | INFO     | exeerrorcode: 0
[2025-06-01 19:33:49] 2025-06-01 23:33:33,471 | INFO     | exeerrordiag: 
[2025-06-01 19:33:49] 2025-06-01 23:33:33,472 | INFO     | exitcode: 0
[2025-06-01 19:33:49] 2025-06-01 23:33:33,472 | INFO     | exitmsg: OK
[2025-06-01 19:33:49] 2025-06-01 23:33:33,472 | INFO     | cpuconsumptiontime: 137733 s
[2025-06-01 19:33:49] 2025-06-01 23:33:33,472 | INFO     | nevents: 400
[2025-06-01 19:33:49] 2025-06-01 23:33:33,472 | INFO     | neventsw: 0
[2025-06-01 19:33:49] 2025-06-01 23:33:33,472 | INFO     | pid: 369458
[2025-06-01 19:33:49] 2025-06-01 23:33:33,473 | INFO     | pgrp: 369458
[2025-06-01 19:33:49] 2025-06-01 23:33:33,473 | INFO     | corecount: 8
[2025-06-01 19:33:49] 2025-06-01 23:33:33,473 | INFO     | event service: False
[2025-06-01 19:33:49] 2025-06-01 23:33:33,473 | INFO     | sizes: {0: 2404398, 1: 2405083, 2: 2405282, 13: 2405544, 21906: 2439121, 21907: 2439120, 21912: 2448245, 21915: 2448301, 21930: 2448471}
[2025-06-01 19:33:49] 2025-06-01 23:33:33,473 | INFO     | --------------------------------------------------
[2025-06-01 19:33:49] 2025-06-01 23:33:33,474 | INFO     | 
[2025-06-01 19:33:49] 2025-06-01 23:33:33,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-01 19:33:49] 2025-06-01 23:33:33,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 19:33:49] 2025-06-01 23:33:33,522 | INFO     | job 6665279944 has completed (purged errors)
[2025-06-01 19:33:49] 2025-06-01 23:33:33,523 | INFO     | overall cleanup function is called
[2025-06-01 19:33:49] 2025-06-01 23:33:34,534 | INFO     | --- collectZombieJob: --- 10, [369458]
[2025-06-01 19:33:49] 2025-06-01 23:33:34,536 | INFO     | zombie collector waiting for pid 369458
[2025-06-01 19:33:49] 2025-06-01 23:33:34,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 19:33:49] 2025-06-01 23:33:34,536 | INFO     | collected zombie processes
[2025-06-01 19:33:49] 2025-06-01 23:33:34,537 | INFO     | will attempt to kill all subprocesses of pid=369458
[2025-06-01 19:33:49] 2025-06-01 23:33:35,548 | INFO     | process IDs to be killed: [369458] (in reverse order)
[2025-06-01 19:33:49] 2025-06-01 23:33:35,840 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 19:33:49] 2025-06-01 23:33:35,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 19:33:49] 2025-06-01 23:33:35,882 | INFO     | did not find any defunct processes belonging to 369458
[2025-06-01 19:33:49] 2025-06-01 23:33:35,921 | INFO     | did not find any defunct processes belonging to 369458
[2025-06-01 19:33:49] 2025-06-01 23:33:35,922 | INFO     | ready for new job
[2025-06-01 19:33:49] 2025-06-01 23:33:35,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 19:33:49] 2025-06-01 23:33:35,927 | INFO     | **************************************
[2025-06-01 19:33:49] 2025-06-01 23:33:35,928 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 19:33:49] 2025-06-01 23:33:35,928 | INFO     | **************************************
[2025-06-01 19:33:49] 2025-06-01 23:33:35,928 | INFO     | 
[2025-06-01 19:33:49] 2025-06-01 23:33:35,954 | INFO     | architecture information:
[2025-06-01 19:33:49] 2025-06-01 23:33:35,955 | INFO     | executing command: cat /etc/os-release
[2025-06-01 19:33:49] 2025-06-01 23:33:35,988 | INFO     | cat /etc/os-release:
[2025-06-01 19:33:49] NAME="CentOS Linux"
[2025-06-01 19:33:49] VERSION="7 (Core)"
[2025-06-01 19:33:49] ID="centos"
[2025-06-01 19:33:49] ID_LIKE="rhel fedora"
[2025-06-01 19:33:49] VERSION_ID="7"
[2025-06-01 19:33:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 19:33:49] ANSI_COLOR="0;31"
[2025-06-01 19:33:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 19:33:49] HOME_URL="https://www.centos.org/"
[2025-06-01 19:33:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 19:33:49] 
[2025-06-01 19:33:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 19:33:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 19:33:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 19:33:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 19:33:49] 
[2025-06-01 19:33:49] 2025-06-01 23:33:35,988 | INFO     | **************************************
[2025-06-01 19:33:49] 2025-06-01 23:33:36,496 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-01 19:33:49] 2025-06-01 23:33:36,535 | INFO     | sufficient remaining disk space (96610549760 B)
[2025-06-01 19:33:49] 2025-06-01 23:33:36,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 19:33:49] 2025-06-01 23:33:36,538 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 19:33:49] 2025-06-01 23:33:36,538 | INFO     | update_server=False
[2025-06-01 19:33:49] 2025-06-01 23:33:36,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 19:33:49] 2025-06-01 23:33:36,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 19:33:49] 2025-06-01 23:33:36,540 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-01 19:33:49] 2025-06-01 23:33:36,541 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 19:33:49] 2025-06-01 23:33:36,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 19:33:49] 2025-06-01 23:33:36,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 19:33:49] 2025-06-01 23:33:36,573 | INFO     | all payload control threads have been joined
[2025-06-01 19:33:49] 2025-06-01 23:33:36,721 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-01 19:33:49] 2025-06-01 23:33:36,721 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-01 19:33:49] 2025-06-01 23:33:36,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 19:33:49] 2025-06-01 23:33:36,722 | INFO     | will abort loop
[2025-06-01 19:33:49] 2025-06-01 23:33:36,782 | INFO     | all data control threads have been joined
[2025-06-01 19:33:49] 2025-06-01 23:33:36,874 | INFO     | all job control threads have been joined
[2025-06-01 19:33:49] 2025-06-01 23:33:37,544 | INFO     | [job] retrieve thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:37,580 | INFO     | [payload] control thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:37,728 | INFO     | [job] job monitor thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:37,760 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:37,772 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:37,788 | INFO     | [data] control thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:37,880 | INFO     | [job] control thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 19:33:49] 2025-06-01 23:33:38,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 19:33:49] 2025-06-01 23:33:38,483 | INFO     | [job] validate thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,513 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,546 | INFO     | [data] copytool_out thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,614 | INFO     | [payload] validate_post thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,680 | INFO     | [payload] failed_post thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:38,690 | INFO     | [data] copytool_in thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:39,431 | INFO     | [job] queue monitor thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:42,328 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 19:33:49] 2025-06-01 23:33:43,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634809423680)>', '<ExcThread(monitor, started 139633941800704)>']
[2025-06-01 19:33:49] 2025-06-01 23:33:43,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 19:33:49] 2025-06-01 23:33:43,581 | INFO     | [monitor] control thread has ended
[2025-06-01 19:33:49] 2025-06-01 23:33:48,209 | INFO     | all workflow threads have been joined
[2025-06-01 19:33:49] 2025-06-01 23:33:48,209 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 19:33:49] 2025-06-01 23:33:48,210 | INFO     | traces error code: 0
[2025-06-01 19:33:49] 2025-06-01 23:33:48,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 19:33:49] 2025-06-01 23:33:48,584 [wrapper] ==== pilot stdout END ====
[2025-06-01 19:33:49] 2025-06-01 23:33:48,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 19:33:49] 2025-06-01 23:33:48,597 [wrapper] pilotpid: 354353
[2025-06-01 19:33:49] 2025-06-01 23:33:48,605 [wrapper] Pilot exit status: 0
[2025-06-01 19:33:49] 2025-06-01 23:33:48,639 [wrapper] pandaids: 6665279944 6665279944
[2025-06-01 19:33:49] 2025-06-01 23:33:48,853 [wrapper] cleanup supervisor_pilot 2411134 354354
[2025-06-01 19:33:49] 2025-06-01 23:33:48,860 [wrapper] Test setup, not cleaning
[2025-06-01 19:33:49] 2025-06-01 23:33:48,867 [wrapper] apfmon messages muted
[2025-06-01 19:33:49] 2025-06-01 23:33:48,873 [wrapper] ==== wrapper stdout END ====
[2025-06-01 19:33:49] 2025-06-01 23:33:48,881 [wrapper] ==== wrapper stderr END ====
[2025-06-01 19:33:49]  *** Error codes and diagnostics ***
[2025-06-01 19:33:49]     "exeErrorCode": 0,
[2025-06-01 19:33:49]     "exeErrorDiag": "",
[2025-06-01 19:33:49]     "pilotErrorCode": 0,
[2025-06-01 19:33:49]     "pilotErrorDiag": "",
[2025-06-01 19:33:49]  *** Listing of results directory ***
[2025-06-01 19:33:49] total 637568
[2025-06-01 19:33:49] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-01 19:33:49] -rwx------. 1 boincer umatlas     37140 May 24 03:23 runpilot2-wrapper.sh
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas      5111 May 24 03:23 queuedata.json
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas    495897 May 24 03:23 pilot3.tar.gz
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas       100 Jun  1 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 19:33:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  1 05:46 run_atlas
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas       105 Jun  1 05:46 job.xml
[2025-06-01 19:33:49] -rw-r--r--. 3 boincer umatlas 224449162 Jun  1 05:46 EVNT.44871834._000404.pool.root.1
[2025-06-01 19:33:49] -rw-r--r--. 3 boincer umatlas 224449162 Jun  1 05:46 ATLAS.root_0
[2025-06-01 19:33:49] -rw-r--r--. 2 boincer umatlas    508869 Jun  1 05:46 input.tar.gz
[2025-06-01 19:33:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 05:46 start_atlas.sh
[2025-06-01 19:33:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  1 05:46 shared
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas         0 Jun  1 05:46 boinc_lockfile
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas      2555 Jun  1 13:27 pandaJob.out
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas    988188 Jun  1 13:27 agis_schedconf.cvmfs.json
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas      6859 Jun  1 19:28 init_data.xml
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas 195962586 Jun  1 19:31 HITS.44871837._010076.pool.root.1
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas       532 Jun  1 19:31 boinc_task_state.xml
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas      1042 Jun  1 19:33 memory_monitor_summary.json
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas   1603667 Jun  1 19:33 agis_ddmendpoints.agis.ALL.json
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas    439235 Jun  1 19:33 log.44871837._010076.job.log.tgz.1
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas        96 Jun  1 19:33 pilot_heartbeat.json
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas      7727 Jun  1 19:33 heartbeat.json
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  1 19:33 boinc_mmap_file
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas        29 Jun  1 19:33 wrapper_checkpoint.txt
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas      4662 Jun  1 19:33 pilotlog.txt
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas   1643283 Jun  1 19:33 log.44871837._010076.job.log.1
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas       357 Jun  1 19:33 output.list
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas       620 Jun  1 19:33 runtime_log
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas   2099200 Jun  1 19:33 result.tar.gz
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas       786 Jun  1 19:33 Wr8MDmNPyc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmn1LKDmxdL1Jn.diag
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas      8755 Jun  1 19:33 runtime_log.err
[2025-06-01 19:33:49] -rw-r--r--. 1 boincer umatlas     23341 Jun  1 19:33 stderr.txt
[2025-06-01 19:33:49] HITS file was successfully produced:
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas 195962586 Jun  1 19:31 shared/HITS.pool.root.1
[2025-06-01 19:33:49]  *** Contents of shared directory: ***
[2025-06-01 19:33:49] total 413136
[2025-06-01 19:33:49] -rw-r--r--. 3 boincer umatlas 224449162 Jun  1 05:46 ATLAS.root_0
[2025-06-01 19:33:49] -rw-r--r--. 2 boincer umatlas    508869 Jun  1 05:46 input.tar.gz
[2025-06-01 19:33:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 05:46 start_atlas.sh
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas 195962586 Jun  1 19:31 HITS.pool.root.1
[2025-06-01 19:33:49] -rw-------. 1 boincer umatlas   2099200 Jun  1 19:33 result.tar.gz
19:33:50 (344996): run_atlas exited; CPU time 139920.089333
19:33:50 (344996): called boinc_finish(0)

</stderr_txt>
]]>

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