Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:47:03 (1425726): wrapper (7.7.26015): starting
03:47:03 (1425726): wrapper: running run_atlas (--nthreads 8)
[2025-06-01 03:47:03] Arguments: --nthreads 8
[2025-06-01 03:47:03] Threads: 8
[2025-06-01 03:47:03] Checking for CVMFS
[2025-06-01 03:47:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 03:47:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 03:47:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 03:47:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 03:47:03] 2.12.6.0 9719 32452 421436 146662 0 78 21415247 32935936 7707 16776704 1 128579445 99.513 173155843 24804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-01 03:47:03] CVMFS is ok
[2025-06-01 03:47:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-01 03:47:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-01 03:47:03] Further information can be found at the LHC@home message board.
[2025-06-01 03:47:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 03:47:03] Checking for apptainer binary...
[2025-06-01 03:47:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 03:47:03] Running /usr/bin/apptainer --version
[2025-06-01 03:47:03] apptainer version 1.4.1-1.el9
[2025-06-01 03:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 03:47:04] c7-13-32.aglt2.org
[2025-06-01 03:47:04] apptainer works
[2025-06-01 03:47:04] Set ATHENA_PROC_NUMBER=8
[2025-06-01 03:47:04] Set ATHENA_CORE_NUMBER=8
[2025-06-01 03:47:04] Starting ATLAS job with PandaID=6666745485
[2025-06-01 03:47:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 05:15:44]  *** The last 200 lines of the pilot log: ***
[2025-06-01 05:15:44]  filetype=log
[2025-06-01 05:15:44]  guid=e8a87170-cb0b-405a-a2c1-97aa89293def
[2025-06-01 05:15:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-01 05:15:44]  is_altstaged=None
[2025-06-01 05:15:44]  is_tar=False
[2025-06-01 05:15:44]  lfn=log.44871837._061468.job.log.tgz.1
[2025-06-01 05:15:44]  mtime=0
[2025-06-01 05:15:44]  protocol_id=None
[2025-06-01 05:15:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-01 05:15:44]  replicas=None
[2025-06-01 05:15:44]  scope=mc23_13p6TeV
[2025-06-01 05:15:44]  status=None
[2025-06-01 05:15:44]  status_code=0
[2025-06-01 05:15:44]  storage_token=
[2025-06-01 05:15:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666745485/log.44871837._061468.job.log.tgz.1
[2025-06-01 05:15:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/ed/log.44871837._061468.job.log.tgz.1
[2025-06-01 05:15:44]  workdir=None
[2025-06-01 05:15:44] ]
[2025-06-01 05:15:44] 2025-06-01 09:15:21,221 | INFO     | monitor loop #394: job 0:6666745485 is in state 'stageout'
[2025-06-01 05:15:44] 2025-06-01 09:15:21,222 | WARNING  | aborting job monitor tasks since payload process 1444578 is not running
[2025-06-01 05:15:44] 2025-06-01 09:15:21,222 | INFO     | transferring file log.44871837._061468.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666745485/log.44871837._061468.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-01 05:15:44] 2025-06-01 09:15:21,223 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666745485/log.44871837._061468.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._061468.job
[2025-06-01 05:15:44] 2025-06-01 09:15:21,245 | INFO     | adding to output.list: log.44871837._061468.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/ed/log.44871837._061468.job.log.tg
[2025-06-01 05:15:44] 2025-06-01 09:15:21,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-01 05:15:44] 2025-06-01 09:15:21,246 | INFO     | summary of transferred files:
[2025-06-01 05:15:44] 2025-06-01 09:15:21,246 | INFO     |  -- lfn=log.44871837._061468.job.log.tgz.1, status_code=0, status=transferred
[2025-06-01 05:15:44] 2025-06-01 09:15:21,246 | INFO     | stage-out finished correctly
[2025-06-01 05:15:44] 2025-06-01 09:15:21,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-01 05:15:44] 2025-06-01 09:15:22,113 | INFO     | job 6666745485 has state=finished
[2025-06-01 05:15:44] 2025-06-01 09:15:22,113 | INFO     | preparing for final server update for job 6666745485 in state='finished'
[2025-06-01 05:15:44] 2025-06-01 09:15:22,114 | INFO     | this job has now completed (state=finished)
[2025-06-01 05:15:44] 2025-06-01 09:15:22,114 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-01 05:15:44] 2025-06-01 09:15:22,114 | INFO     | log transfer has been attempted: DONE
[2025-06-01 05:15:44] 2025-06-01 09:15:22,114 | INFO     | job 6666745485 has finished - writing final server update
[2025-06-01 05:15:44] 2025-06-01 09:15:22,115 | INFO     | total number of processed events: 400 (read)
[2025-06-01 05:15:44] 2025-06-01 09:15:22,133 | INFO     | executing command: lscpu
[2025-06-01 05:15:44] 2025-06-01 09:15:22,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-01 05:15:44] 2025-06-01 09:15:23,726 | INFO     | monitor loop #395: job 0:6666745485 is in state 'finished'
[2025-06-01 05:15:44] 2025-06-01 09:15:23,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 05:15:44] 2025-06-01 09:15:25,990 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-01 05:15:44] 2025-06-01 09:15:25,991 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666745485/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 05:15:44] 2025-06-01 09:15:25,992 | INFO     | extracted standard info from prmon json
[2025-06-01 05:15:44] 2025-06-01 09:15:25,992 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 05:15:44] 2025-06-01 09:15:25,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 05:15:44] 2025-06-01 09:15:25,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 05:15:44] 2025-06-01 09:15:25,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | fitting pss+swap vs Time
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | sum of square deviations: 158737860.0
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | sum of deviations: -13294770202.500004
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | mean x: 1748766774.5
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | mean y: 2341307.3375
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | -- intersect: 146466785295.33533
[2025-06-01 05:15:44] 2025-06-01 09:15:25,995 | INFO     | intersect: 146466785295.33533
[2025-06-01 05:15:44] 2025-06-01 09:15:25,996 | INFO     | chi2: 0.2426583835493689
[2025-06-01 05:15:44] 2025-06-01 09:15:25,996 | INFO     | -- intersect: 146466785295.33533
[2025-06-01 05:15:44] 2025-06-01 09:15:25,996 | INFO     | current memory leak: -83.75 B/s (using 80 data points, chi2=0.24)
[2025-06-01 05:15:44] 2025-06-01 09:15:25,996 | INFO     | ..............................
[2025-06-01 05:15:44] 2025-06-01 09:15:25,996 | INFO     | . Timing measurements:
[2025-06-01 05:15:44] 2025-06-01 09:15:25,996 | INFO     | . get job = 0 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | . initial setup = 2 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | . payload setup = 6 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | . stage-in = 0 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | . payload execution = 5258 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | . stage-out = 0 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | . log creation = 0 s
[2025-06-01 05:15:44] 2025-06-01 09:15:25,997 | INFO     | ..............................
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | 
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | job summary report
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | --------------------------------------------------
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | PanDA job id: 6666745485
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | task id: 44871837
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | errors: (none)
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | pilot state: finished 
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | transexitcode: 0
[2025-06-01 05:15:44] 2025-06-01 09:15:26,066 | INFO     | exeerrorcode: 0
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | exeerrordiag: 
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | exitcode: 0
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | exitmsg: OK
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | cpuconsumptiontime: 38713 s
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | nevents: 400
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | neventsw: 0
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | pid: 1444578
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | pgrp: 1444578
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | corecount: 8
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | event service: False
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | sizes: {0: 2405061, 1: 2405260, 5: 2405466, 11: 2405522, 5269: 2431899, 5271: 2441024, 5276: 2441138}
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | --------------------------------------------------
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | 
[2025-06-01 05:15:44] 2025-06-01 09:15:26,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-01 05:15:44] 2025-06-01 09:15:26,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 05:15:44] 2025-06-01 09:15:26,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 05:15:44] 2025-06-01 09:15:26,091 | INFO     | job 6666745485 has completed (purged errors)
[2025-06-01 05:15:44] 2025-06-01 09:15:26,091 | INFO     | overall cleanup function is called
[2025-06-01 05:15:44] 2025-06-01 09:15:27,098 | INFO     | --- collectZombieJob: --- 10, [1444578]
[2025-06-01 05:15:44] 2025-06-01 09:15:27,099 | INFO     | zombie collector waiting for pid 1444578
[2025-06-01 05:15:44] 2025-06-01 09:15:27,099 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 05:15:44] 2025-06-01 09:15:27,099 | INFO     | collected zombie processes
[2025-06-01 05:15:44] 2025-06-01 09:15:27,099 | INFO     | will attempt to kill all subprocesses of pid=1444578
[2025-06-01 05:15:44] 2025-06-01 09:15:27,404 | INFO     | process IDs to be killed: [1444578] (in reverse order)
[2025-06-01 05:15:44] 2025-06-01 09:15:27,517 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 05:15:44] 2025-06-01 09:15:27,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 05:15:44] 2025-06-01 09:15:27,530 | INFO     | did not find any defunct processes belonging to 1444578
[2025-06-01 05:15:44] 2025-06-01 09:15:27,543 | INFO     | did not find any defunct processes belonging to 1444578
[2025-06-01 05:15:44] 2025-06-01 09:15:27,543 | INFO     | ready for new job
[2025-06-01 05:15:44] 2025-06-01 09:15:27,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 05:15:44] 2025-06-01 09:15:27,545 | INFO     | **************************************
[2025-06-01 05:15:44] 2025-06-01 09:15:27,545 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 05:15:44] 2025-06-01 09:15:27,545 | INFO     | **************************************
[2025-06-01 05:15:44] 2025-06-01 09:15:27,545 | INFO     | 
[2025-06-01 05:15:44] 2025-06-01 09:15:27,561 | INFO     | architecture information:
[2025-06-01 05:15:44] 2025-06-01 09:15:27,562 | INFO     | executing command: cat /etc/os-release
[2025-06-01 05:15:44] 2025-06-01 09:15:27,581 | INFO     | cat /etc/os-release:
[2025-06-01 05:15:44] NAME="CentOS Linux"
[2025-06-01 05:15:44] VERSION="7 (Core)"
[2025-06-01 05:15:44] ID="centos"
[2025-06-01 05:15:44] ID_LIKE="rhel fedora"
[2025-06-01 05:15:44] VERSION_ID="7"
[2025-06-01 05:15:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 05:15:44] ANSI_COLOR="0;31"
[2025-06-01 05:15:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 05:15:44] HOME_URL="https://www.centos.org/"
[2025-06-01 05:15:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 05:15:44] 
[2025-06-01 05:15:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 05:15:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 05:15:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 05:15:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 05:15:44] 
[2025-06-01 05:15:44] 2025-06-01 09:15:27,581 | INFO     | **************************************
[2025-06-01 05:15:44] 2025-06-01 09:15:28,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-01 05:15:44] 2025-06-01 09:15:28,105 | INFO     | sufficient remaining disk space (96665075712 B)
[2025-06-01 05:15:44] 2025-06-01 09:15:28,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 05:15:44] 2025-06-01 09:15:28,105 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 05:15:44] 2025-06-01 09:15:28,105 | INFO     | update_server=False
[2025-06-01 05:15:44] 2025-06-01 09:15:28,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 05:15:44] 2025-06-01 09:15:28,106 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-01 05:15:44] 2025-06-01 09:15:28,106 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 05:15:44] 2025-06-01 09:15:28,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 05:15:44] 2025-06-01 09:15:28,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 05:15:44] 2025-06-01 09:15:28,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 05:15:44] 2025-06-01 09:15:28,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 05:15:44] 2025-06-01 09:15:28,107 | INFO     | aborting loop
[2025-06-01 05:15:44] 2025-06-01 09:15:28,356 | INFO     | all job control threads have been joined
[2025-06-01 05:15:44] 2025-06-01 09:15:28,724 | INFO     | all data control threads have been joined
[2025-06-01 05:15:44] 2025-06-01 09:15:28,801 | INFO     | all payload control threads have been joined
[2025-06-01 05:15:44] 2025-06-01 09:15:29,111 | INFO     | [job] retrieve thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,112 | INFO     | [job] job monitor thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,245 | INFO     | [payload] failed_post thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 05:15:44] 2025-06-01 09:15:29,361 | INFO     | [job] control thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,519 | INFO     | [data] copytool_in thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,721 | INFO     | [payload] validate_post thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,729 | INFO     | [data] control thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,739 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,770 | INFO     | [job] validate thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,806 | INFO     | [payload] control thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:29,831 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:30,113 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:31,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 05:15:44] 2025-06-01 09:15:31,336 | INFO     | [data] copytool_out thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:32,085 | INFO     | [job] queue monitor thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:32,114 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:38,534 | INFO     | job.realtimelogging is not enabled
[2025-06-01 05:15:44] 2025-06-01 09:15:39,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 05:15:44] 2025-06-01 09:15:39,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048339572544)>', '<ExcThread(monitor, started 140047466620672)>']
[2025-06-01 05:15:44] 2025-06-01 09:15:40,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 05:15:44] 2025-06-01 09:15:40,171 | INFO     | [monitor] control thread has ended
[2025-06-01 05:15:44] 2025-06-01 09:15:44,578 | INFO     | all workflow threads have been joined
[2025-06-01 05:15:44] 2025-06-01 09:15:44,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 05:15:44] 2025-06-01 09:15:44,579 | INFO     | traces error code: 0
[2025-06-01 05:15:44] 2025-06-01 09:15:44,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 05:15:44] 2025-06-01 09:15:44,718 [wrapper] ==== pilot stdout END ====
[2025-06-01 05:15:44] 2025-06-01 09:15:44,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 05:15:44] 2025-06-01 09:15:44,724 [wrapper] pilotpid: 1433103
[2025-06-01 05:15:44] 2025-06-01 09:15:44,727 [wrapper] Pilot exit status: 0
[2025-06-01 05:15:44] 2025-06-01 09:15:44,737 [wrapper] pandaids: 6666745485
[2025-06-01 05:15:44] 2025-06-01 09:15:44,815 [wrapper] cleanup supervisor_pilot 1969748 1433105
[2025-06-01 05:15:44] 2025-06-01 09:15:44,819 [wrapper] Test setup, not cleaning
[2025-06-01 05:15:44] 2025-06-01 09:15:44,822 [wrapper] apfmon messages muted
[2025-06-01 05:15:44] 2025-06-01 09:15:44,826 [wrapper] ==== wrapper stdout END ====
[2025-06-01 05:15:44] 2025-06-01 09:15:44,828 [wrapper] ==== wrapper stderr END ====
[2025-06-01 05:15:44]  *** Error codes and diagnostics ***
[2025-06-01 05:15:44]     "exeErrorCode": 0,
[2025-06-01 05:15:44]     "exeErrorDiag": "",
[2025-06-01 05:15:44]     "pilotErrorCode": 0,
[2025-06-01 05:15:44]     "pilotErrorDiag": "",
[2025-06-01 05:15:44]  *** Listing of results directory ***
[2025-06-01 05:15:44] total 422488
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas    495897 May 26 23:05 pilot3.tar.gz
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas      5111 May 26 23:18 queuedata.json
[2025-06-01 05:15:44] -rwx------. 1 boincer umatlas     37140 May 26 23:21 runpilot2-wrapper.sh
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas       100 Jun  1 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 05:15:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  1 03:47 run_atlas
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas       105 Jun  1 03:47 job.xml
[2025-06-01 05:15:44] -rw-r--r--. 2 boincer umatlas 224060550 Jun  1 03:47 EVNT.44871834._002426.pool.root.1
[2025-06-01 05:15:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 03:47 start_atlas.sh
[2025-06-01 05:15:44] drwxrwx--x. 2 boincer umatlas      4096 Jun  1 03:47 shared
[2025-06-01 05:15:44] -rw-r--r--. 2 boincer umatlas    508872 Jun  1 03:47 input.tar.gz
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas         0 Jun  1 03:47 boinc_lockfile
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas      2558 Jun  1 03:47 pandaJob.out
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas    988204 Jun  1 03:47 agis_schedconf.cvmfs.json
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas   1603667 Jun  1 03:47 agis_ddmendpoints.agis.ALL.json
[2025-06-01 05:15:44] drwx------. 4 boincer umatlas      4096 Jun  1 03:47 pilot3
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas      6896 Jun  1 05:09 init_data.xml
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas 203101546 Jun  1 05:14 HITS.44871837._061468.pool.root.1
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas       529 Jun  1 05:14 boinc_task_state.xml
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas        95 Jun  1 05:14 pilot_heartbeat.json
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas      1044 Jun  1 05:15 memory_monitor_summary.json
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas    298467 Jun  1 05:15 log.44871837._061468.job.log.tgz.1
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas      7686 Jun  1 05:15 heartbeat.json
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas      8192 Jun  1 05:15 boinc_mmap_file
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas        27 Jun  1 05:15 wrapper_checkpoint.txt
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas      4548 Jun  1 05:15 pilotlog.txt
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas    516556 Jun  1 05:15 log.44871837._061468.job.log.1
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas       357 Jun  1 05:15 output.list
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas       620 Jun  1 05:15 runtime_log
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas    829440 Jun  1 05:15 result.tar.gz
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas      8659 Jun  1 05:15 runtime_log.err
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas       652 Jun  1 05:15 6JuMDmN3zd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtRYKDmkfxrEm.diag
[2025-06-01 05:15:44] -rw-r--r--. 1 boincer umatlas     21193 Jun  1 05:15 stderr.txt
[2025-06-01 05:15:44] HITS file was successfully produced:
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas 203101546 Jun  1 05:14 shared/HITS.pool.root.1
[2025-06-01 05:15:44]  *** Contents of shared directory: ***
[2025-06-01 05:15:44] total 418488
[2025-06-01 05:15:44] -rw-r--r--. 2 boincer umatlas 224060550 Jun  1 03:47 ATLAS.root_0
[2025-06-01 05:15:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  1 03:47 start_atlas.sh
[2025-06-01 05:15:44] -rw-r--r--. 2 boincer umatlas    508872 Jun  1 03:47 input.tar.gz
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas 203101546 Jun  1 05:14 HITS.pool.root.1
[2025-06-01 05:15:44] -rw-------. 1 boincer umatlas    829440 Jun  1 05:15 result.tar.gz
05:15:46 (1425726): run_atlas exited; CPU time 38762.803447
05:15:46 (1425726): called boinc_finish(0)

</stderr_txt>
]]>

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