Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-01 00:04:45 (9536): Detected: vboxwrapper 26206
2025-06-01 00:04:45 (9536): Detected: BOINC client v7.16.20
2025-06-01 00:04:45 (9536): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-06-01 00:04:45 (9536): Successfully copied 'init_data.xml' to the shared directory.
2025-06-01 00:04:46 (9536): Create VM. (boinc_22ac3746ba63d884, slot#4)
2025-06-01 00:04:46 (9536): Setting Memory Size for VM. (4700MB)
2025-06-01 00:04:47 (9536): Setting CPU Count for VM. (7)
2025-06-01 00:04:47 (9536): Setting Chipset Options for VM.
2025-06-01 00:04:47 (9536): Setting Graphics Controller Options for VM.
2025-06-01 00:04:47 (9536): Setting Boot Options for VM.
2025-06-01 00:04:48 (9536): Setting Network Configuration for NAT.
2025-06-01 00:04:48 (9536): Enabling VM Network Access.
2025-06-01 00:04:48 (9536): Disabling USB Support for VM.
2025-06-01 00:04:48 (9536): Disabling COM Port Support for VM.
2025-06-01 00:04:49 (9536): Disabling LPT Port Support for VM.
2025-06-01 00:04:49 (9536): Disabling Audio Support for VM.
2025-06-01 00:04:49 (9536): Disabling Clipboard Support for VM.
2025-06-01 00:04:49 (9536): Disabling Drag and Drop Support for VM.
2025-06-01 00:04:50 (9536): Adding storage controller(s) to VM.
2025-06-01 00:04:50 (9536): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-01 00:04:50 (9536): Adding VirtualBox Guest Additions to VM.
2025-06-01 00:04:51 (9536): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-01 00:04:51 (9536): forwarding host port 58463 to guest port 80
2025-06-01 00:04:51 (9536): Enabling remote desktop for VM.
2025-06-01 00:04:51 (9536): Required extension pack not installed, remote desktop not enabled.
2025-06-01 00:04:51 (9536): Enabling shared directory for VM.
2025-06-01 00:04:52 (9536): Starting VM using VBoxManage interface. (boinc_22ac3746ba63d884, slot#4)
2025-06-01 00:04:56 (9536): Successfully started VM. (PID = '1144')
2025-06-01 00:04:56 (9536): Reporting VM Process ID to BOINC.
2025-06-01 00:04:56 (9536): Guest Log: BIOS: VirtualBox 6.1.50
2025-06-01 00:04:56 (9536): Guest Log: CPUID EDX: 0x178bfbff
2025-06-01 00:04:56 (9536): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-01 00:04:56 (9536): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-01 00:04:56 (9536): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-01 00:04:56 (9536): Detected: Web Application Enabled (http://localhost:58463)
2025-06-01 00:04:56 (9536): Preference change detected
2025-06-01 00:04:56 (9536): Setting CPU throttle for VM. (100%)
2025-06-01 00:04:56 (9536): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-01 00:04:58 (9536): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-01 00:04:58 (9536): Guest Log: BIOS: Booting from Hard Disk...
2025-06-01 00:05:01 (9536): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-01 00:05:01 (9536): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-01 00:05:01 (9536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-01 00:05:07 (9536): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-01 00:05:07 (9536): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-01 00:05:12 (9536): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000118 main     Log opened 2025-06-01T00:05:12.333057000Z
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000186 main     OS Product: Linux
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000203 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000218 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000232 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000232 main     Process ID: 1349
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.000232 main     Package type: LINUX_64BITS_GENERIC
2025-06-01 00:05:12 (9536): Guest Log: 00:00:00.003988 main     5.2.32 r132073 started. Verbose level = 0
2025-06-01 00:05:13 (9536): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-01 00:05:13 (9536): Guest Log: [INFO] Mounting shared directory
2025-06-01 00:05:13 (9536): Guest Log: [INFO] Checking for init_data.xml
2025-06-01 00:05:14 (9536): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-01 00:05:14 (9536): Guest Log: [INFO] Detected branch: prod
2025-06-01 00:05:14 (9536): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-01 00:05:14 (9536): Guest Log: Copying input files
2025-06-01 00:05:16 (9536): Guest Log: Copied input files into RunAtlas.
2025-06-01 00:05:16 (9536): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-01 00:05:16 (9536): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-01 00:05:16 (9536): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-01 00:05:16 (9536): Guest Log: Further information can be found at the LHC@home message board.
2025-06-01 00:05:22 (9536): Guest Log: 00:00:10.009705 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 190 016 143 000ns (GuestNow=1 748 729 122 322 213 000 ns GuestLast=1 748 736 312 338 356 000 ns fSetTimeLastLoop=true )
2025-06-01 00:05:24 (9536): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-01 00:05:24 (9536): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-01 00:05:24 (9536): Guest Log: 2.6.3.0 1626 0 32184 146648 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-01 00:05:24 (9536): Guest Log: copied the webapp to /var/www
2025-06-01 00:05:25 (9536): Guest Log: ATHENA_PROC_NUMBER=7
2025-06-01 00:05:25 (9536): Guest Log: ATHENA_CORE_NUMBER=7
2025-06-01 00:05:25 (9536): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-01 00:05:25 (9536): Guest Log:  *** Starting ATLAS job. (PandaID=6666806898 taskID=44871837) ***
2025-06-01 01:45:05 (9536): Status Report: Elapsed Time: '6000.000000'
2025-06-01 01:45:05 (9536): Status Report: CPU Time: '39046.140625'
2025-06-01 01:50:46 (9536): Guest Log:  *** Job finished ***
2025-06-01 01:50:46 (9536): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:00:53,169 | INFO     | [data] queue_monitor thread has finished
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:00:55,818 | INFO     | job.realtimelogging is not enabled
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:00:56,881 | INFO     | [payload] run_realtimelog thread has finished
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:00:57,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670949857088)>', '<ExcThread(monitor, started 139669845042944)>']
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:00:58,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:00:58,037 | INFO     | [monitor] control thread has ended
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,776 | INFO     | all workflow threads have been joined
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,776 | INFO     | end of generic workflow (traces error code: 0)
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,776 | INFO     | traces error code: 0
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,867 [wrapper] ==== pilot stdout END ====
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,871 [wrapper] ==== wrapper stdout RESUME ====
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,875 [wrapper] pilotpid: 5968
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,880 [wrapper] Pilot exit status: 0
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,951 [wrapper] pandaids: 6666806898
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,982 [wrapper] cleanup supervisor_pilot  3448 5969
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,987 [wrapper] Test setup, not cleaning
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,991 [wrapper] apfmon messages muted
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,995 [wrapper] ==== wrapper stdout END ====
2025-06-01 01:50:46 (9536): Guest Log: 2025-06-01 00:01:02,999 [wrapper] ==== wrapper stderr END ====
2025-06-01 01:50:46 (9536): Guest Log:  *** Error codes and diagnostics ***
2025-06-01 01:50:46 (9536): Guest Log:     "exeErrorCode": 0,
2025-06-01 01:50:46 (9536): Guest Log:     "exeErrorDiag": "",
2025-06-01 01:50:46 (9536): Guest Log:     "pilotErrorCode": 0,
2025-06-01 01:50:46 (9536): Guest Log:     "pilotErrorDiag": "",
2025-06-01 01:50:46 (9536): Guest Log:  *** Listing of results directory ***
2025-06-01 01:50:46 (9536): Guest Log: total 204864
2025-06-01 01:50:46 (9536): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 06:47 pilot3.tar.gz
2025-06-01 01:50:46 (9536): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 06:50 queuedata.json
2025-06-01 01:50:46 (9536): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 06:50 runpilot2-wrapper.sh
2025-06-01 01:50:46 (9536): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 31 22:05 start_atlas.sh
2025-06-01 01:50:46 (9536): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 May 31 22:05 input.tar.gz
2025-06-01 01:50:46 (9536): Guest Log: -rwxr-xr-x. 1 atlas atlas      8816 May 31 22:05 init_data.xml
2025-06-01 01:50:46 (9536): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 31 22:05 EVNT.44871834._002510.pool.root.1 -> /data/./ATLAS.root_0
2025-06-01 01:50:46 (9536): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 31 22:05 pandaJob.out
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas    987412 May 31 22:06 agis_schedconf.cvmfs.json
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas   1603667 May 31 22:06 agis_ddmendpoints.agis.ALL.json
2025-06-01 01:50:46 (9536): Guest Log: drwx------. 4 atlas atlas      4096 May 31 22:06 pilot3
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas 204189029 Jun  1 00:00 HITS.44871837._063648.pool.root.1
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas        95 Jun  1 00:00 pilot_heartbeat.json
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  1 00:00 memory_monitor_summary.json
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas    302352 Jun  1 00:00 log.44871837._063648.job.log.tgz.1
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas      7711 Jun  1 00:00 heartbeat.json
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  1 00:01 pilotlog.txt
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas    608127 Jun  1 00:01 log.44871837._063648.job.log.1
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas       357 Jun  1 00:01 output.list
2025-06-01 01:50:46 (9536): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  1 00:01 runtime_log
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas    931840 Jun  1 00:01 result.tar.gz
2025-06-01 01:50:46 (9536): Guest Log: -rw-r--r--. 1 atlas atlas      8589 Jun  1 00:01 runtime_log.err
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas       652 Jun  1 00:01 5HLLDm8J3d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmTRKDmMDS45n.diag
2025-06-01 01:50:46 (9536): Guest Log: Looking for outputfile HITS.44871837._063648.pool.root.1
2025-06-01 01:50:46 (9536): Guest Log: HITS file was successfully produced
2025-06-01 01:50:46 (9536): Guest Log: -rw-------. 1 atlas atlas 204189029 Jun  1 00:00 /home/atlas/RunAtlas/HITS.44871837._063648.pool.root.1
2025-06-01 01:50:47 (9536): Guest Log: Successfully finished the ATLAS job!
2025-06-01 01:50:47 (9536): Guest Log: Copying the results back to the shared directory!
2025-06-01 01:50:47 (9536): Guest Log:  *** Contents of shared directory: ***
2025-06-01 01:50:47 (9536): Guest Log: total 421208
2025-06-01 01:50:47 (9536): Guest Log: -rwxrwxrwx. 1 root root 225652348 May 31 22:04 ATLAS.root_0
2025-06-01 01:50:47 (9536): Guest Log: -rwxrwxrwx. 1 root root 204189029 May 31 23:50 HITS.pool.root.1
2025-06-01 01:50:47 (9536): Guest Log: -rwxrwxrwx. 1 root root      8816 May 31 22:04 init_data.xml
2025-06-01 01:50:47 (9536): Guest Log: -rwxrwxrwx. 1 root root    508877 May 31 22:04 input.tar.gz
2025-06-01 01:50:47 (9536): Guest Log: -rwxrwxrwx. 1 root root    931840 May 31 23:50 result.tar.gz
2025-06-01 01:50:47 (9536): Guest Log: -rwxrwxrwx. 1 root root     15093 May 31 22:04 start_atlas.sh
2025-06-01 01:50:47 (9536): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-01 01:50:47 (9536): VM Completion File Detected.
2025-06-01 01:50:47 (9536): Powering off VM.
2025-06-01 01:50:47 (9536): Successfully stopped VM.
2025-06-01 01:50:47 (9536): Deregistering VM. (boinc_22ac3746ba63d884, slot#4)
2025-06-01 01:50:47 (9536): Removing network bandwidth throttle group from VM.
2025-06-01 01:50:48 (9536): Removing VM from VirtualBox.
01:50:53 (9536): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN