Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:34:18 (19092): wrapper (7.7.26015): starting
23:34:18 (19092): wrapper: running run_atlas (--nthreads 8)
[2025-05-31 23:34:18] Arguments: --nthreads 8
[2025-05-31 23:34:18] Threads: 8
[2025-05-31 23:34:18] Checking for CVMFS
[2025-05-31 23:34:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-31 23:34:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-31 23:34:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-31 23:34:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-31 23:34:19] 2.11.2.0 11156 28009 92288 146648 2 126 21025350 25165824 4107 130560 0 14149635 99.726 18487670 2012 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-31 23:34:19] CVMFS is ok
[2025-05-31 23:34:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-31 23:34:19] Checking for apptainer binary...
[2025-05-31 23:34:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-31 23:34:19] Running /usr/bin/apptainer --version
[2025-05-31 23:34:19] apptainer version 1.3.2-1.el7
[2025-05-31 23:34:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-31 23:34:20] cg-vwn264.simple-grid.lan
[2025-05-31 23:34:20] apptainer works
[2025-05-31 23:34:20] Set ATHENA_PROC_NUMBER=8
[2025-05-31 23:34:20] Set ATHENA_CORE_NUMBER=8
[2025-05-31 23:34:20] Starting ATLAS job with PandaID=6667882910
[2025-05-31 23:34:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 04:56:25]  *** The last 200 lines of the pilot log: ***
[2025-06-01 04:56:25] 2025-06-01 02:48:21,522 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 04:56:25] 2025-06-01 02:48:21,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 04:56:25] 2025-06-01 02:48:21,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 04:56:25] 2025-06-01 02:48:21,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 04:56:25] 2025-06-01 02:48:21,529 | INFO     | fitting pss+swap vs Time
[2025-06-01 04:56:25] 2025-06-01 02:48:21,530 | INFO     | sum of square deviations: 8540720135.5
[2025-06-01 04:56:25] 2025-06-01 02:48:21,539 | INFO     | sum of deviations: 85195317794.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,540 | INFO     | mean x: 1748736772.5
[2025-06-01 04:56:25] 2025-06-01 02:48:21,540 | INFO     | mean y: 2465729.046357616
[2025-06-01 04:56:25] 2025-06-01 02:48:21,540 | INFO     | -- intersect: -17441518233.375027
[2025-06-01 04:56:25] 2025-06-01 02:48:21,540 | INFO     | intersect: -17441518233.375027
[2025-06-01 04:56:25] 2025-06-01 02:48:21,540 | INFO     | chi2: 6.214880576062926
[2025-06-01 04:56:25] 2025-06-01 02:48:21,541 | INFO     | sum of square deviations: 8123493708.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,543 | INFO     | sum of deviations: 103588742893.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | mean x: 1748736620.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | mean y: 2472353.3636363638
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | -- intersect: -22296975966.31171
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | intersect: -22296975966.31171
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | chi2: 5.484742234767024
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | current chi2=5.484742234767024 (change=11.748228020793897 %)
[2025-06-01 04:56:25] 2025-06-01 02:48:21,544 | INFO     | right removable region: 296
[2025-06-01 04:56:25] 2025-06-01 02:48:21,545 | INFO     | sum of square deviations: 8123493708.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,547 | INFO     | sum of deviations: -22750162341.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,548 | INFO     | mean x: 1748736925.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,548 | INFO     | mean y: 2505164.0168350167
[2025-06-01 04:56:25] 2025-06-01 02:48:21,548 | INFO     | -- intersect: 4899911423.625542
[2025-06-01 04:56:25] 2025-06-01 02:48:21,548 | INFO     | intersect: 4899911423.625542
[2025-06-01 04:56:25] 2025-06-01 02:48:21,548 | INFO     | chi2: 1.3677401544257597
[2025-06-01 04:56:25] 2025-06-01 02:48:21,548 | INFO     | current chi2=1.3677401544257597 (change=77.99249498544329 %)
[2025-06-01 04:56:25] 2025-06-01 02:48:21,549 | INFO     | sum of square deviations: 7720081493.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,552 | INFO     | sum of deviations: -45756604653.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,552 | INFO     | mean x: 1748737077.5
[2025-06-01 04:56:25] 2025-06-01 02:48:21,552 | INFO     | mean y: 2513792.1506849313
[2025-06-01 04:56:25] 2025-06-01 02:48:21,552 | INFO     | -- intersect: 10367206337.140392
[2025-06-01 04:56:25] 2025-06-01 02:48:21,552 | INFO     | intersect: 10367206337.140392
[2025-06-01 04:56:25] 2025-06-01 02:48:21,553 | INFO     | chi2: 0.9637756319283524
[2025-06-01 04:56:25] 2025-06-01 02:48:21,553 | INFO     | current chi2=0.9637756319283524 (change=29.535180435424902 %)
[2025-06-01 04:56:25] 2025-06-01 02:48:21,553 | INFO     | sum of square deviations: 7330250928.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,556 | INFO     | sum of deviations: -40878270746.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,556 | INFO     | mean x: 1748737230.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,556 | INFO     | mean y: 2511866.43554007
[2025-06-01 04:56:25] 2025-06-01 02:48:21,556 | INFO     | -- intersect: 9754613759.495056
[2025-06-01 04:56:25] 2025-06-01 02:48:21,556 | INFO     | intersect: 9754613759.495056
[2025-06-01 04:56:25] 2025-06-01 02:48:21,557 | INFO     | chi2: 0.9501311475637485
[2025-06-01 04:56:25] 2025-06-01 02:48:21,557 | INFO     | current chi2=0.9501311475637485 (change=1.415732449813402 %)
[2025-06-01 04:56:25] 2025-06-01 02:48:21,557 | INFO     | left removable region: 30
[2025-06-01 04:56:25] 2025-06-01 02:48:21,557 | INFO     | sum of square deviations: 5836025702.5
[2025-06-01 04:56:25] 2025-06-01 02:48:21,560 | INFO     | sum of deviations: 8505773327.0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,560 | INFO     | mean x: 1748737504.5
[2025-06-01 04:56:25] 2025-06-01 02:48:21,560 | INFO     | mean y: 2506550.902255639
[2025-06-01 04:56:25] 2025-06-01 02:48:21,560 | INFO     | -- intersect: -2546208204.642576
[2025-06-01 04:56:25] 2025-06-01 02:48:21,560 | INFO     | intersect: -2546208204.642576
[2025-06-01 04:56:25] 2025-06-01 02:48:21,560 | INFO     | chi2: 0.039145683390218955
[2025-06-01 04:56:25] 2025-06-01 02:48:21,561 | INFO     | -- intersect: -2546208204.642576
[2025-06-01 04:56:25] 2025-06-01 02:48:21,561 | INFO     | current memory leak: 1.46 B/s (using 266 data points, chi2=0.04)
[2025-06-01 04:56:25] 2025-06-01 02:48:21,562 | INFO     | ..............................
[2025-06-01 04:56:25] 2025-06-01 02:48:21,562 | INFO     | . Timing measurements:
[2025-06-01 04:56:25] 2025-06-01 02:48:21,562 | INFO     | . get job = 0 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,562 | INFO     | . initial setup = 2 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,562 | INFO     | . payload setup = 99 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,562 | INFO     | . stage-in = 0 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,563 | INFO     | . payload execution = 18553 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,563 | INFO     | . stage-out = 4 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,563 | INFO     | . log creation = 1 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,563 | INFO     | ..............................
[2025-06-01 04:56:25] 2025-06-01 02:48:21,877 | INFO     | 
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | job summary report
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | --------------------------------------------------
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | PanDA job id: 6667882910
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | task id: 44871837
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | errors: (none)
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 04:56:25] 2025-06-01 02:48:21,878 | INFO     | pilot state: finished 
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | transexitcode: 0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | exeerrorcode: 0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | exeerrordiag: 
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | exitcode: 0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | exitmsg: OK
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | cpuconsumptiontime: 68821 s
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | nevents: 400
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | neventsw: 0
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | pid: 10049
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | pgrp: 10049
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | corecount: 8
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | event service: False
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | sizes: {0: 2405185, 1: 2405185, 11: 2405419, 12: 2405447, 18657: 2437072, 18658: 2437071, 18664: 2446198, 18665: 2446254, 18763: 2446424}
[2025-06-01 04:56:25] 2025-06-01 02:48:21,879 | INFO     | --------------------------------------------------
[2025-06-01 04:56:25] 2025-06-01 02:48:21,880 | INFO     | 
[2025-06-01 04:56:25] 2025-06-01 02:48:21,880 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-06-01 04:56:25] 2025-06-01 02:48:22,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | job 6667882910 has completed (purged errors)
[2025-06-01 04:56:25] 2025-06-01 02:48:22,398 | INFO     | overall cleanup function is called
[2025-06-01 04:56:25] 2025-06-01 02:48:23,411 | INFO     | --- collectZombieJob: --- 10, [10049]
[2025-06-01 04:56:25] 2025-06-01 02:48:23,412 | INFO     | zombie collector waiting for pid 10049
[2025-06-01 04:56:25] 2025-06-01 02:48:23,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 04:56:25] 2025-06-01 02:48:23,412 | INFO     | collected zombie processes
[2025-06-01 04:56:25] 2025-06-01 02:48:23,412 | INFO     | will attempt to kill all subprocesses of pid=10049
[2025-06-01 04:56:25] 2025-06-01 02:48:23,536 | INFO     | process IDs to be killed: [10049] (in reverse order)
[2025-06-01 04:56:25] 2025-06-01 02:48:24,318 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 04:56:25] 2025-06-01 02:48:24,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 04:56:25] 2025-06-01 02:48:24,322 | INFO     | did not find any defunct processes belonging to 10049
[2025-06-01 04:56:25] 2025-06-01 02:48:24,326 | INFO     | did not find any defunct processes belonging to 10049
[2025-06-01 04:56:25] 2025-06-01 02:48:24,326 | INFO     | ready for new job
[2025-06-01 04:56:25] 2025-06-01 02:48:24,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 04:56:25] 2025-06-01 02:48:24,337 | INFO     | **************************************
[2025-06-01 04:56:25] 2025-06-01 02:48:24,337 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 04:56:25] 2025-06-01 02:48:24,337 | INFO     | **************************************
[2025-06-01 04:56:25] 2025-06-01 02:48:24,337 | INFO     | 
[2025-06-01 04:56:25] 2025-06-01 02:48:24,338 | INFO     | pilot is running in a VM
[2025-06-01 04:56:25] 2025-06-01 02:48:24,338 | INFO     | architecture information:
[2025-06-01 04:56:25] 2025-06-01 02:48:24,356 | INFO     | executing command: cat /etc/os-release
[2025-06-01 04:56:25] 2025-06-01 02:48:24,541 | INFO     | cat /etc/os-release:
[2025-06-01 04:56:25] NAME="CentOS Linux"
[2025-06-01 04:56:25] VERSION="7 (Core)"
[2025-06-01 04:56:25] ID="centos"
[2025-06-01 04:56:25] ID_LIKE="rhel fedora"
[2025-06-01 04:56:25] VERSION_ID="7"
[2025-06-01 04:56:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 04:56:25] ANSI_COLOR="0;31"
[2025-06-01 04:56:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 04:56:25] HOME_URL="https://www.centos.org/"
[2025-06-01 04:56:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 04:56:25] 
[2025-06-01 04:56:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 04:56:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 04:56:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 04:56:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 04:56:25] 
[2025-06-01 04:56:25] 2025-06-01 02:48:24,542 | INFO     | **************************************
[2025-06-01 04:56:25] 2025-06-01 02:48:25,046 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-06-01 04:56:25] 2025-06-01 02:48:25,329 | INFO     | sufficient remaining disk space (497182310400 B)
[2025-06-01 04:56:25] 2025-06-01 02:48:25,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 04:56:25] 2025-06-01 02:48:25,329 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 04:56:25] 2025-06-01 02:48:25,330 | INFO     | update_server=False
[2025-06-01 04:56:25] 2025-06-01 02:48:25,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 04:56:25] 2025-06-01 02:48:25,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 04:56:25] 2025-06-01 02:48:25,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 04:56:25] 2025-06-01 02:48:25,333 | INFO     | aborting loop
[2025-06-01 04:56:25] 2025-06-01 02:48:25,453 | INFO     | all data control threads have been joined
[2025-06-01 04:56:25] 2025-06-01 02:48:25,862 | INFO     | all job control threads have been joined
[2025-06-01 04:56:25] 2025-06-01 02:48:25,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 04:56:25] 2025-06-01 02:48:26,188 | INFO     | PID=28214 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-01 04:56:25] 2025-06-01 02:48:26,188 | INFO     | .. there are 9 such processes running
[2025-06-01 04:56:25] 2025-06-01 02:48:26,188 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 04:56:25] 2025-06-01 02:48:26,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 04:56:25] 2025-06-01 02:48:26,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 04:56:25] 2025-06-01 02:48:26,336 | INFO     | [job] retrieve thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,339 | INFO     | [job] job monitor thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,357 | INFO     | [data] copytool_in thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,460 | INFO     | [data] control thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,554 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,656 | INFO     | [job] validate thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,661 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,662 | INFO     | all payload control threads have been joined
[2025-06-01 04:56:25] 2025-06-01 02:48:26,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 04:56:25] 2025-06-01 02:48:26,868 | INFO     | [job] control thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:26,874 | INFO     | [payload] failed_post thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:27,012 | INFO     | [payload] validate_post thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:27,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:27,548 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:27,670 | INFO     | [payload] control thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:27,748 | INFO     | [job] queue monitor thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:27,991 | INFO     | [data] copytool_out thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:29,339 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 04:56:25] 2025-06-01 02:48:30,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448286754624)>', '<ExcThread(monitor, started 140447703885568)>']
[2025-06-01 04:56:25] 2025-06-01 02:48:31,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 04:56:25] 2025-06-01 02:48:31,219 | INFO     | [monitor] control thread has ended
[2025-06-01 04:56:25] 2025-06-01 02:48:35,321 | INFO     | all workflow threads have been joined
[2025-06-01 04:56:25] 2025-06-01 02:48:35,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 04:56:25] 2025-06-01 02:48:35,322 | INFO     | traces error code: 0
[2025-06-01 04:56:25] 2025-06-01 02:48:35,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 04:56:25] 2025-06-01 02:48:35,734 [wrapper] ==== pilot stdout END ====
[2025-06-01 04:56:25] 2025-06-01 02:48:35,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 04:56:25] 2025-06-01 02:48:35,930 [wrapper] pilotpid: 28214
[2025-06-01 04:56:25] 2025-06-01 02:48:36,021 [wrapper] Pilot exit status: 0
[2025-06-01 04:56:25] 2025-06-01 02:48:36,321 [wrapper] pandaids: 6667882910
[2025-06-01 04:56:25] 2025-06-01 02:48:36,933 [wrapper] cleanup supervisor_pilot 25279 28215
[2025-06-01 04:56:25] 2025-06-01 02:48:37,035 [wrapper] Test setup, not cleaning
[2025-06-01 04:56:25] 2025-06-01 02:48:37,119 [wrapper] apfmon messages muted
[2025-06-01 04:56:25] 2025-06-01 02:48:37,185 [wrapper] ==== wrapper stdout END ====
[2025-06-01 04:56:25] 2025-06-01 02:48:37,211 [wrapper] ==== wrapper stderr END ====
[2025-06-01 04:56:25]  *** Error codes and diagnostics ***
[2025-06-01 04:56:25]     "exeErrorCode": 0,
[2025-06-01 04:56:25]     "exeErrorDiag": "",
[2025-06-01 04:56:25]     "pilotErrorCode": 0,
[2025-06-01 04:56:25]     "pilotErrorDiag": "",
[2025-06-01 04:56:25]  *** Listing of results directory ***
[2025-06-01 04:56:25] total 419088
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc    495897 May 28 02:38 pilot3.tar.gz
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc      5111 May 28 03:02 queuedata.json
[2025-06-01 04:56:25] -rwx------. 1 boinc boinc     37140 May 28 03:03 runpilot2-wrapper.sh
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc       100 May 31 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 04:56:25] -rwxr-xr-x. 1 boinc boinc      7986 May 31 23:34 run_atlas
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc       105 May 31 23:34 job.xml
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc      6372 May 31 23:34 init_data.xml
[2025-06-01 04:56:25] -rw-r--r--. 2 boinc boinc 221902509 May 31 23:34 EVNT.44871834._001413.pool.root.1
[2025-06-01 04:56:25] -rw-r--r--. 2 boinc boinc    508885 May 31 23:34 input.tar.gz
[2025-06-01 04:56:25] -rw-r--r--. 2 boinc boinc     15093 May 31 23:34 start_atlas.sh
[2025-06-01 04:56:25] drwxrwx--x. 2 boinc boinc        68 May 31 23:34 shared
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc         0 May 31 23:34 boinc_lockfile
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc      2559 May 31 23:34 pandaJob.out
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc    987412 May 31 23:34 agis_schedconf.cvmfs.json
[2025-06-01 04:56:25] drwx------. 4 boinc boinc      4096 May 31 23:34 pilot3
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc 199355207 Jun  1 04:45 HITS.44871837._076215.pool.root.1
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc       531 Jun  1 04:45 boinc_task_state.xml
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc      1018 Jun  1 04:46 memory_monitor_summary.json
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc   1603667 Jun  1 04:46 agis_ddmendpoints.agis.ALL.json
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc    427854 Jun  1 04:46 log.44871837._076215.job.log.tgz.1
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc        95 Jun  1 04:48 pilot_heartbeat.json
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc      7690 Jun  1 04:48 heartbeat.json
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc      4809 Jun  1 04:48 pilotlog.txt
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc   1606049 Jun  1 04:48 log.44871837._076215.job.log.1
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc       357 Jun  1 04:48 output.list
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc       620 Jun  1 04:48 runtime_log
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc   2048000 Jun  1 04:48 result.tar.gz
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc      8673 Jun  1 04:48 runtime_log.err
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc       657 Jun  1 04:48 pWsNDmXNKe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBraKDmQBAnIo.diag
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc      8192 Jun  1 04:56 boinc_mmap_file
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc        28 Jun  1 04:56 wrapper_checkpoint.txt
[2025-06-01 04:56:25] -rw-r--r--. 1 boinc boinc     20548 Jun  1 04:56 stderr.txt
[2025-06-01 04:56:25] HITS file was successfully produced:
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc 199355207 Jun  1 04:45 shared/HITS.pool.root.1
[2025-06-01 04:56:25]  *** Contents of shared directory: ***
[2025-06-01 04:56:25] total 413904
[2025-06-01 04:56:25] -rw-r--r--. 2 boinc boinc 221902509 May 31 23:34 ATLAS.root_0
[2025-06-01 04:56:25] -rw-r--r--. 2 boinc boinc    508885 May 31 23:34 input.tar.gz
[2025-06-01 04:56:25] -rw-r--r--. 2 boinc boinc     15093 May 31 23:34 start_atlas.sh
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc 199355207 Jun  1 04:45 HITS.pool.root.1
[2025-06-01 04:56:25] -rw-------. 1 boinc boinc   2048000 Jun  1 04:48 result.tar.gz
04:56:27 (19092): run_atlas exited; CPU time 69038.910357
04:56:27 (19092): called boinc_finish(0)

</stderr_txt>
]]>

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