Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:31:19 (984125): wrapper (7.7.26015): starting
16:31:19 (984125): wrapper: running run_atlas (--nthreads 8)
[2025-05-31 16:31:19] Arguments: --nthreads 8
[2025-05-31 16:31:19] Threads: 8
[2025-05-31 16:31:19] Checking for CVMFS
[2025-05-31 16:31:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-31 16:31:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-31 16:31:19] Running cvmfs_config stat atlas.cern.ch
[2025-05-31 16:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-31 16:31:19] 2.12.6.0 4471 32037 488508 146646 1 274 27059281 32935937 10573 16776704 0 125353994 99.563 156453505 27033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-31 16:31:19] CVMFS is ok
[2025-05-31 16:31:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-31 16:31:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-31 16:31:19] Further information can be found at the LHC@home message board.
[2025-05-31 16:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-31 16:31:19] Checking for apptainer binary...
[2025-05-31 16:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-31 16:31:19] Running /usr/bin/apptainer --version
[2025-05-31 16:31:19] apptainer version 1.4.1-1.el9
[2025-05-31 16:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-31 16:31:19] c7-11-13.aglt2.org
[2025-05-31 16:31:19] apptainer works
[2025-05-31 16:31:19] Set ATHENA_PROC_NUMBER=8
[2025-05-31 16:31:19] Set ATHENA_CORE_NUMBER=8
[2025-05-31 16:31:19] Starting ATLAS job with PandaID=6667201798
[2025-05-31 16:31:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-31 18:02:30]  *** The last 200 lines of the pilot log: ***
[2025-05-31 18:02:30]  status_code=0
[2025-05-31 18:02:30]  storage_token=
[2025-05-31 18:02:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667201798/log.44871837._069605.job.log.tgz.1
[2025-05-31 18:02:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/b6/log.44871837._069605.job.log.tgz.1
[2025-05-31 18:02:30]  workdir=None
[2025-05-31 18:02:30] ]
[2025-05-31 18:02:30] 2025-05-31 22:02:13,030 | INFO     | transferring file log.44871837._069605.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667201798/log.44871837._069605.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-31 18:02:30] 2025-05-31 22:02:13,030 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667201798/log.44871837._069605.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._069605.job
[2025-05-31 18:02:30] 2025-05-31 22:02:13,045 | INFO     | adding to output.list: log.44871837._069605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/b6/log.44871837._069605.job.log.tg
[2025-05-31 18:02:30] 2025-05-31 22:02:13,046 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-31 18:02:30] 2025-05-31 22:02:13,046 | INFO     | summary of transferred files:
[2025-05-31 18:02:30] 2025-05-31 22:02:13,046 | INFO     |  -- lfn=log.44871837._069605.job.log.tgz.1, status_code=0, status=transferred
[2025-05-31 18:02:30] 2025-05-31 22:02:13,047 | INFO     | stage-out finished correctly
[2025-05-31 18:02:30] 2025-05-31 22:02:14,813 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-31 18:02:30] 2025-05-31 22:02:14,890 | INFO     | job 6667201798 has state=finished
[2025-05-31 18:02:30] 2025-05-31 22:02:14,891 | INFO     | preparing for final server update for job 6667201798 in state='finished'
[2025-05-31 18:02:30] 2025-05-31 22:02:14,891 | INFO     | this job has now completed (state=finished)
[2025-05-31 18:02:30] 2025-05-31 22:02:14,891 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-31 18:02:30] 2025-05-31 22:02:14,892 | INFO     | log transfer has been attempted: DONE
[2025-05-31 18:02:30] 2025-05-31 22:02:14,892 | INFO     | job 6667201798 has finished - writing final server update
[2025-05-31 18:02:30] 2025-05-31 22:02:14,892 | INFO     | total number of processed events: 400 (read)
[2025-05-31 18:02:30] 2025-05-31 22:02:14,908 | INFO     | executing command: lscpu
[2025-05-31 18:02:30] 2025-05-31 22:02:14,981 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-31 18:02:30] 2025-05-31 22:02:16,580 | WARNING  | process 1000148 can no longer be monitored (due to stat problems) - aborting
[2025-05-31 18:02:30] 2025-05-31 22:02:16,580 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667201798/memory_monitor_summary.json (trf name=prmon)
[2025-05-31 18:02:30] 2025-05-31 22:02:16,581 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667201798/memory_monitor_summary.json (trf name=prmon)
[2025-05-31 18:02:30] 2025-05-31 22:02:16,582 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2979002 B
[2025-05-31 18:02:30] 2025-05-31 22:02:16,582 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15894 B
[2025-05-31 18:02:30] 2025-05-31 22:02:16,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,020 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-31 18:02:30] 2025-05-31 22:02:19,021 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667201798/memory_monitor_summary.json (trf name=prmon)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,027 | INFO     | extracted standard info from prmon json
[2025-05-31 18:02:30] 2025-05-31 22:02:19,028 | INFO     | extracted standard memory fields from prmon json
[2025-05-31 18:02:30] 2025-05-31 22:02:19,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-31 18:02:30] 2025-05-31 22:02:19,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-31 18:02:30] 2025-05-31 22:02:19,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-31 18:02:30] 2025-05-31 22:02:19,031 | INFO     | fitting pss+swap vs Time
[2025-05-31 18:02:30] 2025-05-31 22:02:19,031 | INFO     | sum of square deviations: 170944600.5
[2025-05-31 18:02:30] 2025-05-31 22:02:19,031 | INFO     | sum of deviations: -18899902060.0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | mean x: 1748726293.5
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | mean y: 2434697.2439024393
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | -- intersect: 193344345352.6601
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | intersect: 193344345352.6601
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | chi2: 0.1688413357022447
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | -- intersect: 193344345352.6601
[2025-05-31 18:02:30] 2025-05-31 22:02:19,032 | INFO     | current memory leak: -110.56 B/s (using 82 data points, chi2=0.17)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | ..............................
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . Timing measurements:
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . get job = 0 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . initial setup = 2 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . payload setup = 7 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . stage-in = 0 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . payload execution = 5414 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . stage-out = 0 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | . log creation = 0 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,033 | INFO     | ..............................
[2025-05-31 18:02:30] 2025-05-31 22:02:19,081 | INFO     | sufficient remaining disk space (96658784256 B)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,102 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,111 | INFO     | 
[2025-05-31 18:02:30] 2025-05-31 22:02:19,111 | INFO     | job summary report
[2025-05-31 18:02:30] 2025-05-31 22:02:19,111 | INFO     | --------------------------------------------------
[2025-05-31 18:02:30] 2025-05-31 22:02:19,111 | INFO     | PanDA job id: 6667201798
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | task id: 44871837
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | errors: (none)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | pilot state: finished 
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | transexitcode: 0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | exeerrorcode: 0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | exeerrordiag: 
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | exitcode: 0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | exitmsg: OK
[2025-05-31 18:02:30] 2025-05-31 22:02:19,112 | INFO     | cpuconsumptiontime: 39819 s
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | nevents: 400
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | neventsw: 0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | pid: 1000148
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | pgrp: 1000148
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | corecount: 8
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | event service: False
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 5425: 2431883, 5426: 2431882, 5427: 2440879, 5429: 2441063, 5433: 2441233}
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | --------------------------------------------------
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | 
[2025-05-31 18:02:30] 2025-05-31 22:02:19,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-31 18:02:30] 2025-05-31 22:02:19,114 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6667201798: 3282891 B (within 2537553920 B limit)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,120 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6667201798/HITS.44871837._069605.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,121 | INFO     | total size of present files: 0 B (workdir size: 3282891 B)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,121 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6667201798/HITS.44871837._069605.pool.root.1 since it does not exist
[2025-05-31 18:02:30] 2025-05-31 22:02:19,135 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | job 6667201798 has completed (purged errors)
[2025-05-31 18:02:30] 2025-05-31 22:02:19,137 | INFO     | overall cleanup function is called
[2025-05-31 18:02:30] 2025-05-31 22:02:19,395 | INFO     | number of running child processes to parent process 1000148: 1
[2025-05-31 18:02:30] 2025-05-31 22:02:19,395 | INFO     | maximum number of monitored processes: 6
[2025-05-31 18:02:30] 2025-05-31 22:02:19,395 | INFO     | aborting job monitoring since job object (job id=6667201798) has expired
[2025-05-31 18:02:30] 2025-05-31 22:02:20,147 | INFO     | --- collectZombieJob: --- 10, [1000148]
[2025-05-31 18:02:30] 2025-05-31 22:02:20,147 | INFO     | zombie collector waiting for pid 1000148
[2025-05-31 18:02:30] 2025-05-31 22:02:20,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-31 18:02:30] 2025-05-31 22:02:20,148 | INFO     | collected zombie processes
[2025-05-31 18:02:30] 2025-05-31 22:02:20,148 | INFO     | will attempt to kill all subprocesses of pid=1000148
[2025-05-31 18:02:30] 2025-05-31 22:02:20,361 | INFO     | PID=991949 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-31 18:02:30] 2025-05-31 22:02:20,362 | INFO     | .. there are 8 such processes running
[2025-05-31 18:02:30] 2025-05-31 22:02:20,533 | INFO     | process IDs to be killed: [1000148] (in reverse order)
[2025-05-31 18:02:30] 2025-05-31 22:02:20,636 | WARNING  | found no corresponding commands to process id(s)
[2025-05-31 18:02:30] 2025-05-31 22:02:20,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-31 18:02:30] 2025-05-31 22:02:20,648 | INFO     | did not find any defunct processes belonging to 1000148
[2025-05-31 18:02:30] 2025-05-31 22:02:20,657 | INFO     | did not find any defunct processes belonging to 1000148
[2025-05-31 18:02:30] 2025-05-31 22:02:20,657 | INFO     | ready for new job
[2025-05-31 18:02:30] 2025-05-31 22:02:20,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-31 18:02:30] 2025-05-31 22:02:20,659 | INFO     | **************************************
[2025-05-31 18:02:30] 2025-05-31 22:02:20,659 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-31 18:02:30] 2025-05-31 22:02:20,659 | INFO     | **************************************
[2025-05-31 18:02:30] 2025-05-31 22:02:20,659 | INFO     | 
[2025-05-31 18:02:30] 2025-05-31 22:02:20,675 | INFO     | architecture information:
[2025-05-31 18:02:30] 2025-05-31 22:02:20,675 | INFO     | executing command: cat /etc/os-release
[2025-05-31 18:02:30] 2025-05-31 22:02:20,688 | INFO     | cat /etc/os-release:
[2025-05-31 18:02:30] NAME="CentOS Linux"
[2025-05-31 18:02:30] VERSION="7 (Core)"
[2025-05-31 18:02:30] ID="centos"
[2025-05-31 18:02:30] ID_LIKE="rhel fedora"
[2025-05-31 18:02:30] VERSION_ID="7"
[2025-05-31 18:02:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-31 18:02:30] ANSI_COLOR="0;31"
[2025-05-31 18:02:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-31 18:02:30] HOME_URL="https://www.centos.org/"
[2025-05-31 18:02:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-31 18:02:30] 
[2025-05-31 18:02:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-31 18:02:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-31 18:02:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-31 18:02:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-31 18:02:30] 
[2025-05-31 18:02:30] 2025-05-31 22:02:20,689 | INFO     | **************************************
[2025-05-31 18:02:30] 2025-05-31 22:02:21,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-31 18:02:30] 2025-05-31 22:02:21,211 | INFO     | sufficient remaining disk space (96662978560 B)
[2025-05-31 18:02:30] 2025-05-31 22:02:21,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | INFO     | current server update state: UPDATING_FINAL
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | INFO     | update_server=False
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-31 18:02:30] 2025-05-31 22:02:21,213 | INFO     | found 0 job(s) in 20 queues
[2025-05-31 18:02:30] 2025-05-31 22:02:21,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-31 18:02:30] 2025-05-31 22:02:21,214 | INFO     | aborting loop
[2025-05-31 18:02:30] 2025-05-31 22:02:21,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-31 18:02:30] 2025-05-31 22:02:21,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-31 18:02:30] 2025-05-31 22:02:21,723 | INFO     | all job control threads have been joined
[2025-05-31 18:02:30] 2025-05-31 22:02:22,021 | INFO     | all payload control threads have been joined
[2025-05-31 18:02:30] 2025-05-31 22:02:22,216 | INFO     | [job] job monitor thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,218 | INFO     | [job] retrieve thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,276 | INFO     | all data control threads have been joined
[2025-05-31 18:02:30] 2025-05-31 22:02:22,531 | INFO     | [payload] validate_post thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,629 | INFO     | [job] validate thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,680 | INFO     | [data] copytool_in thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,729 | INFO     | [job] control thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,797 | INFO     | [payload] validate_pre thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,810 | INFO     | [job] create_data_payload thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:22,819 | INFO     | [payload] execute_payloads thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:23,029 | INFO     | [payload] control thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:23,219 | INFO     | [data] copytool_out thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:23,281 | INFO     | [data] control thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:23,408 | INFO     | [payload] failed_post thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:24,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-31 18:02:30] 2025-05-31 22:02:25,123 | INFO     | [job] queue monitor thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:25,220 | INFO     | [data] queue_monitor thread has finished
[2025-05-31 18:02:30] 2025-05-31 22:02:25,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280710756160)>', '<ExcThread(monitor, started 140280359524096)>']
[2025-05-31 18:02:30] 2025-05-31 22:02:26,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-31 18:02:30] 2025-05-31 22:02:26,243 | INFO     | [monitor] control thread has ended
[2025-05-31 18:02:30] 2025-05-31 22:02:30,501 | INFO     | all workflow threads have been joined
[2025-05-31 18:02:30] 2025-05-31 22:02:30,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-31 18:02:30] 2025-05-31 22:02:30,501 | INFO     | traces error code: 0
[2025-05-31 18:02:30] 2025-05-31 22:02:30,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-31 18:02:30] 2025-05-31 22:02:30,637 [wrapper] ==== pilot stdout END ====
[2025-05-31 18:02:30] 2025-05-31 22:02:30,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-31 18:02:30] 2025-05-31 22:02:30,643 [wrapper] pilotpid: 991949
[2025-05-31 18:02:30] 2025-05-31 22:02:30,647 [wrapper] Pilot exit status: 0
[2025-05-31 18:02:30] 2025-05-31 22:02:30,667 [wrapper] pandaids: 6667201798
[2025-05-31 18:02:30] 2025-05-31 22:02:30,742 [wrapper] cleanup supervisor_pilot 1308046 991950
[2025-05-31 18:02:30] 2025-05-31 22:02:30,746 [wrapper] Test setup, not cleaning
[2025-05-31 18:02:30] 2025-05-31 22:02:30,749 [wrapper] apfmon messages muted
[2025-05-31 18:02:30] 2025-05-31 22:02:30,752 [wrapper] ==== wrapper stdout END ====
[2025-05-31 18:02:30] 2025-05-31 22:02:30,755 [wrapper] ==== wrapper stderr END ====
[2025-05-31 18:02:30]  *** Error codes and diagnostics ***
[2025-05-31 18:02:30]     "exeErrorCode": 0,
[2025-05-31 18:02:30]     "exeErrorDiag": "",
[2025-05-31 18:02:30]     "pilotErrorCode": 0,
[2025-05-31 18:02:30]     "pilotErrorDiag": "",
[2025-05-31 18:02:30]  *** Listing of results directory ***
[2025-05-31 18:02:30] total 423212
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas    495897 May 27 11:39 pilot3.tar.gz
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas      5111 May 27 11:40 queuedata.json
[2025-05-31 18:02:30] -rwx------. 1 boincer umatlas     37140 May 27 11:45 runpilot2-wrapper.sh
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas       100 May 31 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-31 18:02:30] -rwxr-xr-x. 1 boincer umatlas      7986 May 31 16:31 run_atlas
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas       105 May 31 16:31 job.xml
[2025-05-31 18:02:30] -rw-r--r--. 2 boincer umatlas 226749028 May 31 16:31 EVNT.44871834._002737.pool.root.1
[2025-05-31 18:02:30] -rw-r--r--. 2 boincer umatlas     15093 May 31 16:31 start_atlas.sh
[2025-05-31 18:02:30] drwxrwx--x. 2 boincer umatlas      4096 May 31 16:31 shared
[2025-05-31 18:02:30] -rw-r--r--. 2 boincer umatlas    508884 May 31 16:31 input.tar.gz
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas         0 May 31 16:31 boinc_lockfile
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas      2559 May 31 16:31 pandaJob.out
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas    987412 May 31 16:31 agis_schedconf.cvmfs.json
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas   1603667 May 31 16:31 agis_ddmendpoints.agis.ALL.json
[2025-05-31 18:02:30] drwx------. 4 boincer umatlas      4096 May 31 16:31 pilot3
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas      6897 May 31 18:00 init_data.xml
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas 201104828 May 31 18:01 HITS.44871837._069605.pool.root.1
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas       529 May 31 18:01 boinc_task_state.xml
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas      1029 May 31 18:02 memory_monitor_summary.json
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas        95 May 31 18:02 pilot_heartbeat.json
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas    303202 May 31 18:02 log.44871837._069605.job.log.tgz.1
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas      7688 May 31 18:02 heartbeat.json
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas      8192 May 31 18:02 boinc_mmap_file
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas        27 May 31 18:02 wrapper_checkpoint.txt
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas      4476 May 31 18:02 pilotlog.txt
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas    533668 May 31 18:02 log.44871837._069605.job.log.1
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas       357 May 31 18:02 output.list
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas       620 May 31 18:02 runtime_log
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas    860160 May 31 18:02 result.tar.gz
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas      8659 May 31 18:02 runtime_log.err
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas       652 May 31 18:02 Kn4NDmsfBe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdnZKDmAOmQvm.diag
[2025-05-31 18:02:30] -rw-r--r--. 1 boincer umatlas     22422 May 31 18:02 stderr.txt
[2025-05-31 18:02:30] HITS file was successfully produced:
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas 201104828 May 31 18:01 shared/HITS.pool.root.1
[2025-05-31 18:02:30]  *** Contents of shared directory: ***
[2025-05-31 18:02:30] total 419188
[2025-05-31 18:02:30] -rw-r--r--. 2 boincer umatlas 226749028 May 31 16:31 ATLAS.root_0
[2025-05-31 18:02:30] -rw-r--r--. 2 boincer umatlas     15093 May 31 16:31 start_atlas.sh
[2025-05-31 18:02:30] -rw-r--r--. 2 boincer umatlas    508884 May 31 16:31 input.tar.gz
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas 201104828 May 31 18:01 HITS.pool.root.1
[2025-05-31 18:02:30] -rw-------. 1 boincer umatlas    860160 May 31 18:02 result.tar.gz
18:02:32 (984125): run_atlas exited; CPU time 39872.171945
18:02:32 (984125): called boinc_finish(0)

</stderr_txt>
]]>

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