Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-31 19:37:13 (8128): Detected: vboxwrapper 26206
2025-05-31 19:37:13 (8128): Detected: BOINC client v7.16.20
2025-05-31 19:37:14 (8128): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-05-31 19:37:14 (8128): Successfully copied 'init_data.xml' to the shared directory.
2025-05-31 19:37:14 (8128): Create VM. (boinc_3066e4212dad48cf, slot#0)
2025-05-31 19:37:15 (8128): Setting Memory Size for VM. (4800MB)
2025-05-31 19:37:15 (8128): Setting CPU Count for VM. (8)
2025-05-31 19:37:15 (8128): Setting Chipset Options for VM.
2025-05-31 19:37:16 (8128): Setting Graphics Controller Options for VM.
2025-05-31 19:37:16 (8128): Setting Boot Options for VM.
2025-05-31 19:37:16 (8128): Setting Network Configuration for NAT.
2025-05-31 19:37:16 (8128): Enabling VM Network Access.
2025-05-31 19:37:17 (8128): Disabling USB Support for VM.
2025-05-31 19:37:17 (8128): Disabling COM Port Support for VM.
2025-05-31 19:37:17 (8128): Disabling LPT Port Support for VM.
2025-05-31 19:37:18 (8128): Disabling Audio Support for VM.
2025-05-31 19:37:18 (8128): Disabling Clipboard Support for VM.
2025-05-31 19:37:18 (8128): Disabling Drag and Drop Support for VM.
2025-05-31 19:37:18 (8128): Adding storage controller(s) to VM.
2025-05-31 19:37:19 (8128): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-31 19:37:19 (8128): Adding VirtualBox Guest Additions to VM.
2025-05-31 19:37:19 (8128): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-31 19:37:20 (8128): forwarding host port 56063 to guest port 80
2025-05-31 19:37:20 (8128): Enabling remote desktop for VM.
2025-05-31 19:37:20 (8128): Required extension pack not installed, remote desktop not enabled.
2025-05-31 19:37:20 (8128): Enabling shared directory for VM.
2025-05-31 19:37:21 (8128): Starting VM using VBoxManage interface. (boinc_3066e4212dad48cf, slot#0)
2025-05-31 19:37:28 (8128): Successfully started VM. (PID = '7972')
2025-05-31 19:37:28 (8128): Reporting VM Process ID to BOINC.
2025-05-31 19:37:28 (8128): Guest Log: BIOS: VirtualBox 6.1.50
2025-05-31 19:37:28 (8128): Guest Log: CPUID EDX: 0x178bfbff
2025-05-31 19:37:28 (8128): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-31 19:37:28 (8128): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-31 19:37:28 (8128): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-31 19:37:28 (8128): Guest Log: BIOS: Booting from Hard Disk...
2025-05-31 19:37:28 (8128): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-31 19:37:28 (8128): Detected: Web Application Enabled (http://localhost:56063)
2025-05-31 19:37:28 (8128): Preference change detected
2025-05-31 19:37:28 (8128): Setting CPU throttle for VM. (100%)
2025-05-31 19:37:29 (8128): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-31 19:37:33 (8128): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-31 19:37:33 (8128): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-31 19:37:33 (8128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-31 19:37:41 (8128): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-31 19:37:41 (8128): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-31 19:37:45 (8128): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000093 main     Log opened 2025-05-31T19:37:44.830249000Z
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000163 main     OS Product: Linux
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000179 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000238 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000278 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000278 main     Process ID: 1365
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000279 main     Package type: LINUX_64BITS_GENERIC
2025-05-31 19:37:45 (8128): Guest Log: 00:00:00.000953 main     5.2.32 r132073 started. Verbose level = 0
2025-05-31 19:37:45 (8128): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-31 19:37:45 (8128): Guest Log: [INFO] Mounting shared directory
2025-05-31 19:37:45 (8128): Guest Log: [INFO] Checking for init_data.xml
2025-05-31 19:37:47 (8128): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-31 19:37:47 (8128): Guest Log: [INFO] Detected branch: prod
2025-05-31 19:37:47 (8128): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-31 19:37:47 (8128): Guest Log: Copying input files
2025-05-31 19:37:48 (8128): Guest Log: Copied input files into RunAtlas.
2025-05-31 19:37:48 (8128): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-31 19:37:48 (8128): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-31 19:37:48 (8128): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-31 19:37:48 (8128): Guest Log: Further information can be found at the LHC@home message board.
2025-05-31 19:37:54 (8128): Guest Log: 00:00:10.011094 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 483 549 000ns (GuestNow=1 748 713 075 349 313 000 ns GuestLast=1 748 720 264 832 862 000 ns fSetTimeLastLoop=true )
2025-05-31 19:37:55 (8128): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-31 19:37:55 (8128): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-31 19:37:55 (8128): Guest Log: 2.6.3.0 1641 0 32168 146641 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-31 19:37:56 (8128): Guest Log: copied the webapp to /var/www
2025-05-31 19:37:57 (8128): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-31 19:37:57 (8128): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-31 19:37:57 (8128): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-31 19:37:57 (8128): Guest Log:  *** Starting ATLAS job. (PandaID=6667580935 taskID=44871837) ***
2025-05-31 21:07:07 (8128): Guest Log:  *** Job finished ***
2025-05-31 21:07:07 (8128): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:42,144 | INFO     | [payload] execute_payloads thread has finished
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:42,246 | INFO     | [payload] failed_post thread has finished
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:43,977 | INFO     | [data] queue_monitor thread has finished
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:44,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621363423040)>', '<ExcThread(monitor, started 139620763285248)>']
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:44,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:44,987 | INFO     | [monitor] control thread has ended
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,757 | INFO     | all workflow threads have been joined
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,757 | INFO     | end of generic workflow (traces error code: 0)
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,757 | INFO     | traces error code: 0
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,865 [wrapper] ==== pilot stdout END ====
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,869 [wrapper] ==== wrapper stdout RESUME ====
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,874 [wrapper] pilotpid: 5992
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,878 [wrapper] Pilot exit status: 0
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,959 [wrapper] pandaids: 6667580935
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,987 [wrapper] cleanup supervisor_pilot  1181 5993
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,992 [wrapper] Test setup, not cleaning
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:49,997 [wrapper] apfmon messages muted
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:50,001 [wrapper] ==== wrapper stdout END ====
2025-05-31 21:07:07 (8128): Guest Log: 2025-05-31 19:15:50,006 [wrapper] ==== wrapper stderr END ====
2025-05-31 21:07:07 (8128): Guest Log:  *** Error codes and diagnostics ***
2025-05-31 21:07:07 (8128): Guest Log:     "exeErrorCode": 0,
2025-05-31 21:07:07 (8128): Guest Log:     "exeErrorDiag": "",
2025-05-31 21:07:07 (8128): Guest Log:     "pilotErrorCode": 0,
2025-05-31 21:07:07 (8128): Guest Log:     "pilotErrorDiag": "",
2025-05-31 21:07:07 (8128): Guest Log:  *** Listing of results directory ***
2025-05-31 21:07:07 (8128): Guest Log: total 203660
2025-05-31 21:07:07 (8128): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 20:43 pilot3.tar.gz
2025-05-31 21:07:07 (8128): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 20:56 queuedata.json
2025-05-31 21:07:07 (8128): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 20:59 runpilot2-wrapper.sh
2025-05-31 21:07:07 (8128): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 31 17:37 start_atlas.sh
2025-05-31 21:07:07 (8128): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 May 31 17:37 input.tar.gz
2025-05-31 21:07:07 (8128): Guest Log: -rwxr-xr-x. 1 atlas atlas      8790 May 31 17:37 init_data.xml
2025-05-31 21:07:07 (8128): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 31 17:37 EVNT.44871834._002878.pool.root.1 -> /data/./ATLAS.root_0
2025-05-31 21:07:07 (8128): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 31 17:37 pandaJob.out
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas    987412 May 31 17:38 agis_schedconf.cvmfs.json
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas   1603667 May 31 17:38 agis_ddmendpoints.agis.ALL.json
2025-05-31 21:07:07 (8128): Guest Log: drwx------. 4 atlas atlas      4096 May 31 17:38 pilot3
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas        95 May 31 19:14 pilot_heartbeat.json
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas 203114647 May 31 19:15 HITS.44871837._073375.pool.root.1
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas      1027 May 31 19:15 memory_monitor_summary.json
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas    310836 May 31 19:15 log.44871837._073375.job.log.tgz.1
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas      7707 May 31 19:15 heartbeat.json
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas      4536 May 31 19:15 pilotlog.txt
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas    520705 May 31 19:15 log.44871837._073375.job.log.1
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas       357 May 31 19:15 output.list
2025-05-31 21:07:07 (8128): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 31 19:15 runtime_log
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas    849920 May 31 19:15 result.tar.gz
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas       652 May 31 19:15 WZjMDmmZGe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4NaKDmOLtwtm.diag
2025-05-31 21:07:07 (8128): Guest Log: -rw-r--r--. 1 atlas atlas      8589 May 31 19:15 runtime_log.err
2025-05-31 21:07:07 (8128): Guest Log: Looking for outputfile HITS.44871837._073375.pool.root.1
2025-05-31 21:07:07 (8128): Guest Log: HITS file was successfully produced
2025-05-31 21:07:07 (8128): Guest Log: -rw-------. 1 atlas atlas 203114647 May 31 19:15 /home/atlas/RunAtlas/HITS.44871837._073375.pool.root.1
2025-05-31 21:07:08 (8128): Guest Log: Successfully finished the ATLAS job!
2025-05-31 21:07:08 (8128): Guest Log: Copying the results back to the shared directory!
2025-05-31 21:07:08 (8128): Guest Log:  *** Contents of shared directory: ***
2025-05-31 21:07:08 (8128): Guest Log: total 421608
2025-05-31 21:07:08 (8128): Guest Log: -rwxrwxrwx. 1 root root 227214773 May 31 17:37 ATLAS.root_0
2025-05-31 21:07:08 (8128): Guest Log: -rwxrwxrwx. 1 root root 203114647 May 31 19:07 HITS.pool.root.1
2025-05-31 21:07:08 (8128): Guest Log: -rwxrwxrwx. 1 root root      8790 May 31 17:37 init_data.xml
2025-05-31 21:07:08 (8128): Guest Log: -rwxrwxrwx. 1 root root    508883 May 31 04:28 input.tar.gz
2025-05-31 21:07:08 (8128): Guest Log: -rwxrwxrwx. 1 root root    849920 May 31 19:07 result.tar.gz
2025-05-31 21:07:08 (8128): Guest Log: -rwxrwxrwx. 1 root root     15093 May 31 04:28 start_atlas.sh
2025-05-31 21:07:08 (8128): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-31 21:07:08 (8128): VM Completion File Detected.
2025-05-31 21:07:08 (8128): Powering off VM.
2025-05-31 21:07:09 (8128): Successfully stopped VM.
2025-05-31 21:07:09 (8128): Deregistering VM. (boinc_3066e4212dad48cf, slot#0)
2025-05-31 21:07:09 (8128): Removing network bandwidth throttle group from VM.
2025-05-31 21:07:09 (8128): Removing VM from VirtualBox.
21:07:14 (8128): called boinc_finish(0)

</stderr_txt>
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