Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:27 (68419): wrapper (7.7.26015): starting
18:09:27 (68419): wrapper: running run_atlas (--nthreads 10)
[2025-05-30 18:09:27] Arguments: --nthreads 10
[2025-05-30 18:09:27] Threads: 10
[2025-05-30 18:09:27] Checking for CVMFS
[2025-05-30 18:09:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 18:09:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 18:09:27] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 18:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 18:09:27] 2.12.6.0 41504 31888 435912 146613 2 465 21081522 32935936 15435 16776704 0 136124704 99.678 112946546 11799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-30 18:09:27] CVMFS is ok
[2025-05-30 18:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 18:09:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 18:09:27] Further information can be found at the LHC@home message board.
[2025-05-30 18:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 18:09:27] Checking for apptainer binary...
[2025-05-30 18:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 18:09:27] Running /usr/bin/apptainer --version
[2025-05-30 18:09:27] apptainer version 1.4.1-1.el9
[2025-05-30 18:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 18:09:27] c-5-4.aglt2.org
[2025-05-30 18:09:27] apptainer works
[2025-05-30 18:09:27] Set ATHENA_PROC_NUMBER=10
[2025-05-30 18:09:27] Set ATHENA_CORE_NUMBER=10
[2025-05-30 18:09:27] Starting ATLAS job with PandaID=6667365042
[2025-05-30 18:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 20:27:04]  *** The last 200 lines of the pilot log: ***
[2025-05-30 20:27:04] 2025-05-31 00:26:48,621 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667365042/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,621 | INFO     | extracted standard info from prmon json
[2025-05-30 20:27:04] 2025-05-31 00:26:48,622 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 20:27:04] 2025-05-31 00:26:48,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 20:27:04] 2025-05-31 00:26:48,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 20:27:04] 2025-05-31 00:26:48,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 20:27:04] 2025-05-31 00:26:48,625 | INFO     | fitting pss+swap vs Time
[2025-05-30 20:27:04] 2025-05-31 00:26:48,626 | INFO     | sum of square deviations: 762994001.7333335
[2025-05-30 20:27:04] 2025-05-31 00:26:48,627 | INFO     | sum of deviations: 25341121690.73335
[2025-05-30 20:27:04] 2025-05-31 00:26:48,627 | INFO     | mean x: 1748647095.1555555
[2025-05-30 20:27:04] 2025-05-31 00:26:48,627 | INFO     | mean y: 2194909.1555555556
[2025-05-30 20:27:04] 2025-05-31 00:26:48,627 | INFO     | -- intersect: -58075167077.7236
[2025-05-30 20:27:04] 2025-05-31 00:26:48,627 | INFO     | intersect: -58075167077.7236
[2025-05-30 20:27:04] 2025-05-31 00:26:48,627 | INFO     | chi2: 2.5018899781226853
[2025-05-30 20:27:04] 2025-05-31 00:26:48,628 | INFO     | sum of square deviations: 681333759.1076902
[2025-05-30 20:27:04] 2025-05-31 00:26:48,628 | INFO     | sum of deviations: 32516494802.4923
[2025-05-30 20:27:04] 2025-05-31 00:26:48,628 | INFO     | mean x: 1748646942.6615384
[2025-05-30 20:27:04] 2025-05-31 00:26:48,629 | INFO     | mean y: 2207847.2384615387
[2025-05-30 20:27:04] 2025-05-31 00:26:48,629 | INFO     | -- intersect: -83451559799.49399
[2025-05-30 20:27:04] 2025-05-31 00:26:48,629 | INFO     | intersect: -83451559799.49399
[2025-05-30 20:27:04] 2025-05-31 00:26:48,629 | INFO     | chi2: 1.810405602994826
[2025-05-30 20:27:04] 2025-05-31 00:26:48,629 | INFO     | current chi2=1.810405602994826 (change=27.63848055567658 %)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,629 | INFO     | sum of square deviations: 605704036.1120021
[2025-05-30 20:27:04] 2025-05-31 00:26:48,630 | INFO     | sum of deviations: 30590408266.407986
[2025-05-30 20:27:04] 2025-05-31 00:26:48,630 | INFO     | mean x: 1748646790.152
[2025-05-30 20:27:04] 2025-05-31 00:26:48,630 | INFO     | mean y: 2203972.768
[2025-05-30 20:27:04] 2025-05-31 00:26:48,631 | INFO     | -- intersect: -88311256125.42793
[2025-05-30 20:27:04] 2025-05-31 00:26:48,631 | INFO     | intersect: -88311256125.42793
[2025-05-30 20:27:04] 2025-05-31 00:26:48,631 | INFO     | chi2: 1.8105442205448077
[2025-05-30 20:27:04] 2025-05-31 00:26:48,631 | INFO     | current chi2=1.8105442205448077 (change=-0.007656712382710519 %)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,631 | INFO     | right removable region: 124
[2025-05-30 20:27:04] 2025-05-31 00:26:48,631 | INFO     | sum of square deviations: 681320949.1076902
[2025-05-30 20:27:04] 2025-05-31 00:26:48,632 | INFO     | sum of deviations: 1341705377.4000034
[2025-05-30 20:27:04] 2025-05-31 00:26:48,632 | INFO     | mean x: 1748647247.6615384
[2025-05-30 20:27:04] 2025-05-31 00:26:48,633 | INFO     | mean y: 2239363.1
[2025-05-30 20:27:04] 2025-05-31 00:26:48,633 | INFO     | -- intersect: -3441320413.589567
[2025-05-30 20:27:04] 2025-05-31 00:26:48,633 | INFO     | intersect: -3441320413.589567
[2025-05-30 20:27:04] 2025-05-31 00:26:48,633 | INFO     | chi2: 0.7591411782159468
[2025-05-30 20:27:04] 2025-05-31 00:26:48,633 | INFO     | current chi2=0.7591411782159468 (change=69.65729169331519 %)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,634 | INFO     | sum of square deviations: 605694521.4719998
[2025-05-30 20:27:04] 2025-05-31 00:26:48,634 | INFO     | sum of deviations: -1396917852.880001
[2025-05-30 20:27:04] 2025-05-31 00:26:48,634 | INFO     | mean x: 1748647400.168
[2025-05-30 20:27:04] 2025-05-31 00:26:48,634 | INFO     | mean y: 2244813.28
[2025-05-30 20:27:04] 2025-05-31 00:26:48,635 | INFO     | -- intersect: 4035163529.0551124
[2025-05-30 20:27:04] 2025-05-31 00:26:48,635 | INFO     | intersect: 4035163529.0551124
[2025-05-30 20:27:04] 2025-05-31 00:26:48,635 | INFO     | chi2: 0.7337908516237124
[2025-05-30 20:27:04] 2025-05-31 00:26:48,635 | INFO     | current chi2=0.7337908516237124 (change=3.339342841579232 %)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,635 | INFO     | left removable region: 20
[2025-05-30 20:27:04] 2025-05-31 00:26:48,635 | INFO     | sum of square deviations: 348852188.88461506
[2025-05-30 20:27:04] 2025-05-31 00:26:48,636 | INFO     | sum of deviations: 2994657377.0576916
[2025-05-30 20:27:04] 2025-05-31 00:26:48,636 | INFO     | mean x: 1748647369.6730769
[2025-05-30 20:27:04] 2025-05-31 00:26:48,636 | INFO     | mean y: 2265356.9134615385
[2025-05-30 20:27:04] 2025-05-31 00:26:48,636 | INFO     | -- intersect: -15008675988.207478
[2025-05-30 20:27:04] 2025-05-31 00:26:48,637 | INFO     | intersect: -15008675988.207478
[2025-05-30 20:27:04] 2025-05-31 00:26:48,637 | INFO     | chi2: 0.018098809975909312
[2025-05-30 20:27:04] 2025-05-31 00:26:48,637 | INFO     | -- intersect: -15008675988.207478
[2025-05-30 20:27:04] 2025-05-31 00:26:48,637 | INFO     | current memory leak: 8.58 B/s (using 104 data points, chi2=0.02)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | ..............................
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . Timing measurements:
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . get job = 0 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . initial setup = 3 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . payload setup = 8 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . stage-in = 0 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . payload execution = 8193 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,638 | INFO     | . stage-out = 0 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,639 | INFO     | . log creation = 0 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,639 | INFO     | ..............................
[2025-05-30 20:27:04] 2025-05-31 00:26:48,745 | INFO     | 
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | job summary report
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | --------------------------------------------------
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | PanDA job id: 6667365042
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | task id: 44871837
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | errors: (none)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | pilot state: finished 
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | transexitcode: 0
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | exeerrorcode: 0
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | exeerrordiag: 
[2025-05-30 20:27:04] 2025-05-31 00:26:48,746 | INFO     | exitcode: 0
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | exitmsg: OK
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | cpuconsumptiontime: 60051 s
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | nevents: 400
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | neventsw: 0
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | pid: 81425
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | pgrp: 81425
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | corecount: 10
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | event service: False
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | sizes: {0: 2405007, 1: 2405262, 5: 2405468, 12: 2405524, 8206: 2433140, 8207: 2442081, 8208: 2442265, 8214: 2442435}
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | --------------------------------------------------
[2025-05-30 20:27:04] 2025-05-31 00:26:48,747 | INFO     | 
[2025-05-30 20:27:04] 2025-05-31 00:26:48,748 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-30 20:27:04] 2025-05-31 00:26:48,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | job 6667365042 has completed (purged errors)
[2025-05-30 20:27:04] 2025-05-31 00:26:48,772 | INFO     | overall cleanup function is called
[2025-05-30 20:27:04] 2025-05-31 00:26:49,780 | INFO     | --- collectZombieJob: --- 10, [81425]
[2025-05-30 20:27:04] 2025-05-31 00:26:49,780 | INFO     | zombie collector waiting for pid 81425
[2025-05-30 20:27:04] 2025-05-31 00:26:49,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 20:27:04] 2025-05-31 00:26:49,781 | INFO     | collected zombie processes
[2025-05-30 20:27:04] 2025-05-31 00:26:49,781 | INFO     | will attempt to kill all subprocesses of pid=81425
[2025-05-30 20:27:04] 2025-05-31 00:26:50,111 | INFO     | process IDs to be killed: [81425] (in reverse order)
[2025-05-30 20:27:04] 2025-05-31 00:26:50,209 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 20:27:04] 2025-05-31 00:26:50,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 20:27:04] 2025-05-31 00:26:50,221 | INFO     | did not find any defunct processes belonging to 81425
[2025-05-30 20:27:04] 2025-05-31 00:26:50,234 | INFO     | did not find any defunct processes belonging to 81425
[2025-05-30 20:27:04] 2025-05-31 00:26:50,234 | INFO     | ready for new job
[2025-05-30 20:27:04] 2025-05-31 00:26:50,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 20:27:04] 2025-05-31 00:26:50,236 | INFO     | **************************************
[2025-05-30 20:27:04] 2025-05-31 00:26:50,236 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 20:27:04] 2025-05-31 00:26:50,236 | INFO     | **************************************
[2025-05-30 20:27:04] 2025-05-31 00:26:50,236 | INFO     | 
[2025-05-30 20:27:04] 2025-05-31 00:26:50,249 | INFO     | architecture information:
[2025-05-30 20:27:04] 2025-05-31 00:26:50,250 | INFO     | executing command: cat /etc/os-release
[2025-05-30 20:27:04] 2025-05-31 00:26:50,259 | INFO     | cat /etc/os-release:
[2025-05-30 20:27:04] NAME="CentOS Linux"
[2025-05-30 20:27:04] VERSION="7 (Core)"
[2025-05-30 20:27:04] ID="centos"
[2025-05-30 20:27:04] ID_LIKE="rhel fedora"
[2025-05-30 20:27:04] VERSION_ID="7"
[2025-05-30 20:27:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 20:27:04] ANSI_COLOR="0;31"
[2025-05-30 20:27:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 20:27:04] HOME_URL="https://www.centos.org/"
[2025-05-30 20:27:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 20:27:04] 
[2025-05-30 20:27:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 20:27:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 20:27:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 20:27:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 20:27:04] 
[2025-05-30 20:27:04] 2025-05-31 00:26:50,259 | INFO     | **************************************
[2025-05-30 20:27:04] 2025-05-31 00:26:50,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-30 20:27:04] 2025-05-31 00:26:50,780 | INFO     | sufficient remaining disk space (76573310976 B)
[2025-05-30 20:27:04] 2025-05-31 00:26:50,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 20:27:04] 2025-05-31 00:26:50,781 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 20:27:04] 2025-05-31 00:26:50,781 | INFO     | update_server=False
[2025-05-30 20:27:04] 2025-05-31 00:26:50,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 20:27:04] 2025-05-31 00:26:50,781 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 20:27:04] 2025-05-31 00:26:50,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 20:27:04] 2025-05-31 00:26:50,782 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 20:27:04] 2025-05-31 00:26:50,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 20:27:04] 2025-05-31 00:26:50,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 20:27:04] 2025-05-31 00:26:51,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 20:27:04] 2025-05-31 00:26:51,241 | INFO     | aborting loop
[2025-05-30 20:27:04] 2025-05-31 00:26:51,416 | INFO     | all data control threads have been joined
[2025-05-30 20:27:04] 2025-05-31 00:26:51,786 | INFO     | [job] retrieve thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:51,864 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:51,924 | INFO     | all job control threads have been joined
[2025-05-30 20:27:04] 2025-05-31 00:26:52,095 | INFO     | [job] validate thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,238 | INFO     | all payload control threads have been joined
[2025-05-30 20:27:04] 2025-05-31 00:26:52,246 | INFO     | [job] job monitor thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,296 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,372 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,422 | INFO     | [data] control thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,787 | INFO     | [data] copytool_out thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:52,929 | INFO     | [job] control thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:53,106 | INFO     | [payload] validate_post thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:53,144 | INFO     | [data] copytool_in thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:53,174 | INFO     | [payload] failed_post thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:53,243 | INFO     | [payload] control thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:53,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 20:27:04] 2025-05-31 00:26:53,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 20:27:04] 2025-05-31 00:26:54,761 | INFO     | [job] queue monitor thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:57,257 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 20:27:04] 2025-05-31 00:26:59,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130530195264)>', '<ExcThread(monitor, started 140130169886464)>']
[2025-05-30 20:27:04] 2025-05-31 00:26:59,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 20:27:04] 2025-05-31 00:26:59,829 | INFO     | [monitor] control thread has ended
[2025-05-30 20:27:04] 2025-05-31 00:27:04,065 | INFO     | all workflow threads have been joined
[2025-05-30 20:27:04] 2025-05-31 00:27:04,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 20:27:04] 2025-05-31 00:27:04,066 | INFO     | traces error code: 0
[2025-05-30 20:27:04] 2025-05-31 00:27:04,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 20:27:04] 2025-05-31 00:27:04,228 [wrapper] ==== pilot stdout END ====
[2025-05-30 20:27:04] 2025-05-31 00:27:04,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 20:27:04] 2025-05-31 00:27:04,232 [wrapper] pilotpid: 72428
[2025-05-30 20:27:04] 2025-05-31 00:27:04,234 [wrapper] Pilot exit status: 0
[2025-05-30 20:27:04] 2025-05-31 00:27:04,249 [wrapper] pandaids: 6667365042
[2025-05-30 20:27:04] 2025-05-31 00:27:04,314 [wrapper] cleanup supervisor_pilot  730723 72429
[2025-05-30 20:27:04] 2025-05-31 00:27:04,316 [wrapper] Test setup, not cleaning
[2025-05-30 20:27:04] 2025-05-31 00:27:04,319 [wrapper] apfmon messages muted
[2025-05-30 20:27:04] 2025-05-31 00:27:04,322 [wrapper] ==== wrapper stdout END ====
[2025-05-30 20:27:04] 2025-05-31 00:27:04,325 [wrapper] ==== wrapper stderr END ====
[2025-05-30 20:27:04]  *** Error codes and diagnostics ***
[2025-05-30 20:27:04]     "exeErrorCode": 0,
[2025-05-30 20:27:04]     "exeErrorDiag": "",
[2025-05-30 20:27:04]     "pilotErrorCode": 0,
[2025-05-30 20:27:04]     "pilotErrorDiag": "",
[2025-05-30 20:27:04]  *** Listing of results directory ***
[2025-05-30 20:27:04] total 413992
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas    495897 May 27 12:39 pilot3.tar.gz
[2025-05-30 20:27:04] -rwx------. 1 boincer umatlas     37140 May 27 13:20 runpilot2-wrapper.sh
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas      5111 May 27 13:20 queuedata.json
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas       100 May 30 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 20:27:04] -rwxr-xr-x. 1 boincer umatlas      7986 May 30 18:09 run_atlas
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas       105 May 30 18:09 job.xml
[2025-05-30 20:27:04] -rw-r--r--. 2 boincer umatlas 224403273 May 30 18:09 EVNT.44871834._002782.pool.root.1
[2025-05-30 20:27:04] -rw-r--r--. 2 boincer umatlas     15093 May 30 18:09 start_atlas.sh
[2025-05-30 20:27:04] drwxrwx--x. 2 boincer umatlas      4096 May 30 18:09 shared
[2025-05-30 20:27:04] -rw-r--r--. 2 boincer umatlas    508878 May 30 18:09 input.tar.gz
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas         0 May 30 18:09 boinc_lockfile
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas      2559 May 30 18:09 pandaJob.out
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas    987388 May 30 18:09 agis_schedconf.cvmfs.json
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas   1603667 May 30 18:09 agis_ddmendpoints.agis.ALL.json
[2025-05-30 20:27:04] drwx------. 4 boincer umatlas      4096 May 30 18:09 pilot3
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas      6656 May 30 20:20 init_data.xml
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas 193485176 May 30 20:26 HITS.44871837._070820.pool.root.1
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas        95 May 30 20:26 pilot_heartbeat.json
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas       529 May 30 20:26 boinc_task_state.xml
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas      1043 May 30 20:26 memory_monitor_summary.json
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas    360510 May 30 20:26 log.44871837._070820.job.log.tgz.1
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas      7715 May 30 20:26 heartbeat.json
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas        27 May 30 20:27 wrapper_checkpoint.txt
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas      8192 May 30 20:27 boinc_mmap_file
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas      4476 May 30 20:27 pilotlog.txt
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas    738549 May 30 20:27 log.44871837._070820.job.log.1
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas       357 May 30 20:27 output.list
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas       620 May 30 20:27 runtime_log
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas   1116160 May 30 20:27 result.tar.gz
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas      8646 May 30 20:27 runtime_log.err
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas       650 May 30 20:27 9WoKDmR9Ce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCASKDmWLdv4n.diag
[2025-05-30 20:27:04] -rw-r--r--. 1 boincer umatlas     20899 May 30 20:27 stderr.txt
[2025-05-30 20:27:04] HITS file was successfully produced:
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas 193485176 May 30 20:26 shared/HITS.pool.root.1
[2025-05-30 20:27:04]  *** Contents of shared directory: ***
[2025-05-30 20:27:04] total 409712
[2025-05-30 20:27:04] -rw-r--r--. 2 boincer umatlas 224403273 May 30 18:09 ATLAS.root_0
[2025-05-30 20:27:04] -rw-r--r--. 2 boincer umatlas     15093 May 30 18:09 start_atlas.sh
[2025-05-30 20:27:04] -rw-r--r--. 2 boincer umatlas    508878 May 30 18:09 input.tar.gz
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas 193485176 May 30 20:26 HITS.pool.root.1
[2025-05-30 20:27:04] -rw-------. 1 boincer umatlas   1116160 May 30 20:27 result.tar.gz
20:27:06 (68419): run_atlas exited; CPU time 60261.448711
20:27:06 (68419): called boinc_finish(0)

</stderr_txt>
]]>

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