Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-30 20:38:42 (226340): Detected: vboxwrapper 26206
2025-05-30 20:38:42 (226340): Detected: BOINC client v8.0.4
2025-05-30 20:38:43 (226340): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-30 20:38:43 (226340): Successfully copied 'init_data.xml' to the shared directory.
2025-05-30 20:38:44 (226340): Create VM. (boinc_0eccbfc4fab538ce, slot#14)
2025-05-30 20:38:44 (226340): Setting Memory Size for VM. (4200MB)
2025-05-30 20:38:45 (226340): Setting CPU Count for VM. (2)
2025-05-30 20:38:45 (226340): Setting Chipset Options for VM.
2025-05-30 20:38:45 (226340): Setting Graphics Controller Options for VM.
2025-05-30 20:38:45 (226340): Setting Boot Options for VM.
2025-05-30 20:38:46 (226340): Setting Network Configuration for NAT.
2025-05-30 20:38:46 (226340): Enabling VM Network Access.
2025-05-30 20:38:46 (226340): Disabling USB Support for VM.
2025-05-30 20:38:46 (226340): Disabling COM Port Support for VM.
2025-05-30 20:38:47 (226340): Disabling LPT Port Support for VM.
2025-05-30 20:38:47 (226340): Disabling Audio Support for VM.
2025-05-30 20:38:47 (226340): Disabling Clipboard Support for VM.
2025-05-30 20:38:47 (226340): Disabling Drag and Drop Support for VM.
2025-05-30 20:38:48 (226340): Adding storage controller(s) to VM.
2025-05-30 20:38:48 (226340): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-30 20:38:51 (226340): Adding VirtualBox Guest Additions to VM.
2025-05-30 20:38:51 (226340): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-30 20:38:51 (226340): forwarding host port 60422 to guest port 80
2025-05-30 20:38:52 (226340): Enabling remote desktop for VM.
2025-05-30 20:38:52 (226340): Required extension pack not installed, remote desktop not enabled.
2025-05-30 20:38:52 (226340): Enabling shared directory for VM.
2025-05-30 20:38:52 (226340): Starting VM using VBoxManage interface. (boinc_0eccbfc4fab538ce, slot#14)
2025-05-30 20:38:57 (226340): Successfully started VM. (PID = '89488')
2025-05-30 20:38:57 (226340): Reporting VM Process ID to BOINC.
2025-05-30 20:38:57 (226340): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-30 20:38:57 (226340): Guest Log: CPUID EDX: 0x178bfbff
2025-05-30 20:38:57 (226340): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-30 20:38:57 (226340): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-30 20:38:57 (226340): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-30 20:38:57 (226340): Detected: Web Application Enabled (http://localhost:60422)
2025-05-30 20:38:57 (226340): Preference change detected
2025-05-30 20:38:57 (226340): Setting CPU throttle for VM. (90%)
2025-05-30 20:38:58 (226340): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-30 20:38:59 (226340): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-30 20:38:59 (226340): Guest Log: BIOS: Booting from Hard Disk...
2025-05-30 20:39:02 (226340): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-30 20:39:02 (226340): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-30 20:39:02 (226340): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-30 20:39:09 (226340): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-30 20:39:09 (226340): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-30 20:39:22 (226340): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000164 main     Log opened 2025-05-30T20:39:20.923571000Z
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000272 main     OS Product: Linux
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000301 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000351 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000379 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000379 main     Process ID: 1270
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.000380 main     Package type: LINUX_64BITS_GENERIC
2025-05-30 20:39:22 (226340): Guest Log: 00:00:00.001290 main     5.2.32 r132073 started. Verbose level = 0
2025-05-30 20:39:22 (226340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-30 20:39:22 (226340): Guest Log: [INFO] Mounting shared directory
2025-05-30 20:39:22 (226340): Guest Log: [INFO] Checking for init_data.xml
2025-05-30 20:39:31 (226340): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-30 20:39:31 (226340): Guest Log: [INFO] Detected branch: prod
2025-05-30 20:39:31 (226340): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-30 20:39:31 (226340): Guest Log: Copying input files
2025-05-30 20:39:32 (226340): Guest Log: 00:00:10.015029 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 575 828 000ns (GuestNow=1 748 633 972 352 292 000 ns GuestLast=1 748 637 560 928 120 000 ns fSetTimeLastLoop=true )
2025-05-30 20:39:32 (226340): Guest Log: Copied input files into RunAtlas.
2025-05-30 20:39:32 (226340): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-30 20:39:32 (226340): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-30 20:39:32 (226340): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-30 20:39:32 (226340): Guest Log: Further information can be found at the LHC@home message board.
2025-05-30 20:39:42 (226340): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-30 20:39:42 (226340): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-30 20:39:42 (226340): Guest Log: 2.6.3.0 1549 0 30188 146610 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-30 20:39:45 (226340): Guest Log: copied the webapp to /var/www
2025-05-30 20:39:45 (226340): Guest Log: ATHENA_PROC_NUMBER=2
2025-05-30 20:39:45 (226340): Guest Log: ATHENA_CORE_NUMBER=2
2025-05-30 20:39:46 (226340): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-30 20:39:46 (226340): Guest Log:  *** Starting ATLAS job. (PandaID=6666745490 taskID=44871837) ***
2025-05-30 21:04:57 (226340): VM state change detected. (old = 'running', new = 'paused')
2025-05-30 21:16:22 (226340): VM state change detected. (old = 'paused', new = 'running')
2025-05-30 22:33:17 (226340): Status Report: Elapsed Time: '6000.718363'
2025-05-30 22:33:17 (226340): Status Report: CPU Time: '10575.406250'
2025-05-30 22:49:17 (226340): VM state change detected. (old = 'running', new = 'paused')
2025-05-31 00:27:41 (226340): Guest Log: 01:58:30.505557 timesync vgsvcTimeSyncWorker: Radical host time change: 5 900 385 000 000ns (HostNow=1 748 647 599 275 000 000 ns HostLast=1 748 641 698 890 000 000 ns)
2025-05-31 00:27:41 (226340): VM state change detected. (old = 'paused', new = 'running')
2025-05-31 00:27:47 (226340): Guest Log: 01:58:40.515072 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 536 441 459 000ns (GuestNow=1 748 647 609 284 231 000 ns GuestLast=1 748 641 072 842 772 000 ns fSetTimeLastLoop=true )
2025-05-31 01:57:08 (226340): Status Report: Elapsed Time: '12000.845892'
2025-05-31 01:57:08 (226340): Status Report: CPU Time: '21948.859375'
2025-05-31 02:52:08 (226340): Guest Log:  *** Job finished ***
2025-05-31 02:52:08 (226340): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:08,799 | INFO     | [payload] validate_post thread has finished
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:08,804 | INFO     | [job] create_data_payload thread has finished
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:10,409 | INFO     | [data] queue_monitor thread has finished
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:11,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713129510720)>', '<ExcThread(monitor, started 140712691611392)>']
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:12,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:12,422 | INFO     | [monitor] control thread has ended
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,814 | INFO     | all workflow threads have been joined
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,814 | INFO     | end of generic workflow (traces error code: 0)
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,814 | INFO     | traces error code: 0
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,952 [wrapper] ==== pilot stdout END ====
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,956 [wrapper] ==== wrapper stdout RESUME ====
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,959 [wrapper] pilotpid: 5840
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:16,963 [wrapper] Pilot exit status: 0
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:17,021 [wrapper] pandaids: 6666745490
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:17,044 [wrapper] cleanup supervisor_pilot 18461 5841
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:17,047 [wrapper] Test setup, not cleaning
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:17,050 [wrapper] apfmon messages muted
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:17,054 [wrapper] ==== wrapper stdout END ====
2025-05-31 02:52:08 (226340): Guest Log: 2025-05-31 01:51:17,057 [wrapper] ==== wrapper stderr END ====
2025-05-31 02:52:08 (226340): Guest Log:  *** Error codes and diagnostics ***
2025-05-31 02:52:08 (226340): Guest Log:     "exeErrorCode": 0,
2025-05-31 02:52:08 (226340): Guest Log:     "exeErrorDiag": "",
2025-05-31 02:52:08 (226340): Guest Log:     "pilotErrorCode": 0,
2025-05-31 02:52:08 (226340): Guest Log:     "pilotErrorDiag": "",
2025-05-31 02:52:08 (226340): Guest Log:  *** Listing of results directory ***
2025-05-31 02:52:09 (226340): Guest Log: total 196924
2025-05-31 02:52:09 (226340): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 03:05 pilot3.tar.gz
2025-05-31 02:52:09 (226340): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 03:18 queuedata.json
2025-05-31 02:52:09 (226340): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 03:21 runpilot2-wrapper.sh
2025-05-31 02:52:09 (226340): Guest Log: -rwxr-xr-x. 1 atlas atlas      8897 May 30 19:39 init_data.xml
2025-05-31 02:52:09 (226340): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 May 30 19:39 input.tar.gz
2025-05-31 02:52:09 (226340): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 30 19:39 start_atlas.sh
2025-05-31 02:52:09 (226340): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 19:39 EVNT.44871834._002426.pool.root.1 -> /data/./ATLAS.root_0
2025-05-31 02:52:09 (226340): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 30 19:39 pandaJob.out
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas    987388 May 30 19:40 agis_schedconf.cvmfs.json
2025-05-31 02:52:09 (226340): Guest Log: drwx------. 4 atlas atlas      4096 May 30 19:40 pilot3
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas 194685706 May 31 01:50 HITS.44871837._061473.pool.root.1
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas        97 May 31 01:50 pilot_heartbeat.json
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas      1039 May 31 01:50 memory_monitor_summary.json
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas   1603667 May 31 01:50 agis_ddmendpoints.agis.ALL.json
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas    296954 May 31 01:50 log.44871837._061473.job.log.tgz.1
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas      7679 May 31 01:51 heartbeat.json
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas      4536 May 31 01:51 pilotlog.txt
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas   1302194 May 31 01:51 log.44871837._061473.job.log.1
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas       357 May 31 01:51 output.list
2025-05-31 02:52:09 (226340): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 31 01:51 runtime_log
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas   1617920 May 31 01:51 result.tar.gz
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas       652 May 31 01:51 tK4MDmN3zd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyRYKDmLU9VRo.diag
2025-05-31 02:52:09 (226340): Guest Log: -rw-r--r--. 1 atlas atlas      8571 May 31 01:51 runtime_log.err
2025-05-31 02:52:09 (226340): Guest Log: Looking for outputfile HITS.44871837._061473.pool.root.1
2025-05-31 02:52:09 (226340): Guest Log: HITS file was successfully produced
2025-05-31 02:52:09 (226340): Guest Log: -rw-------. 1 atlas atlas 194685706 May 31 01:50 /home/atlas/RunAtlas/HITS.44871837._061473.pool.root.1
2025-05-31 02:52:10 (226340): Guest Log: Successfully finished the ATLAS job!
2025-05-31 02:52:10 (226340): Guest Log: Copying the results back to the shared directory!
2025-05-31 02:52:10 (226340): Guest Log:  *** Contents of shared directory: ***
2025-05-31 02:52:10 (226340): Guest Log: total 411034
2025-05-31 02:52:10 (226340): Guest Log: -rwxrwxrwx. 1 root root 224060550 May 30 19:38 ATLAS.root_0
2025-05-31 02:52:10 (226340): Guest Log: -rwxrwxrwx. 1 root root 194685706 May 31  2025 HITS.pool.root.1
2025-05-31 02:52:10 (226340): Guest Log: -rwxrwxrwx. 1 root root      8897 May 30 19:38 init_data.xml
2025-05-31 02:52:10 (226340): Guest Log: -rwxrwxrwx. 1 root root    508875 May 30 19:15 input.tar.gz
2025-05-31 02:52:10 (226340): Guest Log: -rwxrwxrwx. 1 root root   1617920 May 31  2025 result.tar.gz
2025-05-31 02:52:10 (226340): Guest Log: -rwxrwxrwx. 1 root root     15093 May 30 19:15 start_atlas.sh
2025-05-31 02:52:10 (226340): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-31 02:52:10 (226340): VM Completion File Detected.
2025-05-31 02:52:10 (226340): Powering off VM.
2025-05-31 02:52:11 (226340): Successfully stopped VM.
2025-05-31 02:52:11 (226340): Deregistering VM. (boinc_0eccbfc4fab538ce, slot#14)
2025-05-31 02:52:11 (226340): Removing network bandwidth throttle group from VM.
2025-05-31 02:52:11 (226340): Removing VM from VirtualBox.
02:52:17 (226340): called boinc_finish(0)

</stderr_txt>
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