Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:44:18 (3563297): wrapper (7.7.26015): starting
11:44:18 (3563297): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 11:44:18] Arguments: --nthreads 12
[2025-05-30 11:44:18] Threads: 12
[2025-05-30 11:44:18] Checking for CVMFS
[2025-05-30 11:44:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 11:44:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 11:44:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 11:44:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 11:44:18] 2.12.6.0 34032 24435 417796 146604 0 569 28797828 29414401 12912 16776704 0 69939503 99.451 97769077 32156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-30 11:44:18] CVMFS is ok
[2025-05-30 11:44:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 11:44:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 11:44:18] Further information can be found at the LHC@home message board.
[2025-05-30 11:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 11:44:18] Checking for apptainer binary...
[2025-05-30 11:44:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 11:44:18] Running /usr/bin/apptainer --version
[2025-05-30 11:44:20] apptainer version 1.4.1-1.el9
[2025-05-30 11:44:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 11:44:21] c6-5-37-4.aglt2.org
[2025-05-30 11:44:21] apptainer works
[2025-05-30 11:44:21] Set ATHENA_PROC_NUMBER=12
[2025-05-30 11:44:21] Set ATHENA_CORE_NUMBER=12
[2025-05-30 11:44:21] Starting ATLAS job with PandaID=6668231876
[2025-05-30 11:44:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 13:18:19]  *** The last 200 lines of the pilot log: ***
[2025-05-30 13:18:19]  guid=4e1cbe83-684d-4f8d-8a7e-bf37836cfb35
[2025-05-30 13:18:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-30 13:18:19]  is_altstaged=None
[2025-05-30 13:18:19]  is_tar=False
[2025-05-30 13:18:19]  lfn=log.44871837._081055.job.log.tgz.1
[2025-05-30 13:18:19]  mtime=0
[2025-05-30 13:18:19]  protocol_id=None
[2025-05-30 13:18:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-30 13:18:19]  replicas=None
[2025-05-30 13:18:19]  scope=mc23_13p6TeV
[2025-05-30 13:18:19]  status=None
[2025-05-30 13:18:19]  status_code=0
[2025-05-30 13:18:19]  storage_token=
[2025-05-30 13:18:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668231876/log.44871837._081055.job.log.tgz.1
[2025-05-30 13:18:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/6d/log.44871837._081055.job.log.tgz.1
[2025-05-30 13:18:19]  workdir=None
[2025-05-30 13:18:19] ]
[2025-05-30 13:18:19] 2025-05-30 17:17:55,913 | INFO     | transferring file log.44871837._081055.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668231876/log.44871837._081055.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-30 13:18:19] 2025-05-30 17:17:55,913 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668231876/log.44871837._081055.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._081055.job
[2025-05-30 13:18:19] 2025-05-30 17:17:55,931 | INFO     | adding to output.list: log.44871837._081055.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/6d/log.44871837._081055.job.log.tg
[2025-05-30 13:18:19] 2025-05-30 17:17:55,932 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-30 13:18:19] 2025-05-30 17:17:55,932 | INFO     | summary of transferred files:
[2025-05-30 13:18:19] 2025-05-30 17:17:55,932 | INFO     |  -- lfn=log.44871837._081055.job.log.tgz.1, status_code=0, status=transferred
[2025-05-30 13:18:19] 2025-05-30 17:17:55,932 | INFO     | stage-out finished correctly
[2025-05-30 13:18:19] 2025-05-30 17:17:58,016 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-30 13:18:19] 2025-05-30 17:17:58,092 | INFO     | monitor loop #394: job 0:6668231876 is in state 'finished'
[2025-05-30 13:18:19] 2025-05-30 17:17:58,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 13:18:19] 2025-05-30 17:18:00,207 | INFO     | job 6668231876 has state=finished
[2025-05-30 13:18:19] 2025-05-30 17:18:00,207 | INFO     | preparing for final server update for job 6668231876 in state='finished'
[2025-05-30 13:18:19] 2025-05-30 17:18:00,208 | INFO     | this job has now completed (state=finished)
[2025-05-30 13:18:19] 2025-05-30 17:18:00,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-30 13:18:19] 2025-05-30 17:18:00,209 | INFO     | log transfer has been attempted: DONE
[2025-05-30 13:18:19] 2025-05-30 17:18:00,209 | INFO     | job 6668231876 has finished - writing final server update
[2025-05-30 13:18:19] 2025-05-30 17:18:00,209 | INFO     | total number of processed events: 400 (read)
[2025-05-30 13:18:19] 2025-05-30 17:18:00,229 | INFO     | executing command: lscpu
[2025-05-30 13:18:19] 2025-05-30 17:18:00,296 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 13:18:19] 2025-05-30 17:18:00,596 | INFO     | monitor loop #395: job 0:6668231876 is in state 'finished'
[2025-05-30 13:18:19] 2025-05-30 17:18:00,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 13:18:19] 2025-05-30 17:18:03,105 | INFO     | monitor loop #396: job 0:6668231876 is in state 'finished'
[2025-05-30 13:18:19] 2025-05-30 17:18:03,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 13:18:19] 2025-05-30 17:18:04,718 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-30 13:18:19] 2025-05-30 17:18:04,719 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668231876/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 13:18:19] 2025-05-30 17:18:04,721 | INFO     | extracted standard info from prmon json
[2025-05-30 13:18:19] 2025-05-30 17:18:04,721 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 13:18:19] 2025-05-30 17:18:04,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 13:18:19] 2025-05-30 17:18:04,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 13:18:19] 2025-05-30 17:18:04,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 13:18:19] 2025-05-30 17:18:04,727 | INFO     | fitting pss+swap vs Time
[2025-05-30 13:18:19] 2025-05-30 17:18:04,728 | INFO     | sum of square deviations: 190350152.42352962
[2025-05-30 13:18:19] 2025-05-30 17:18:04,728 | INFO     | sum of deviations: -11791196581.717648
[2025-05-30 13:18:19] 2025-05-30 17:18:04,729 | INFO     | mean x: 1748622766.317647
[2025-05-30 13:18:19] 2025-05-30 17:18:04,729 | INFO     | mean y: 2459208.211764706
[2025-05-30 13:18:19] 2025-05-30 17:18:04,729 | INFO     | -- intersect: 108320495849.66608
[2025-05-30 13:18:19] 2025-05-30 17:18:04,729 | INFO     | intersect: 108320495849.66608
[2025-05-30 13:18:19] 2025-05-30 17:18:04,729 | INFO     | chi2: 0.22433727551137972
[2025-05-30 13:18:19] 2025-05-30 17:18:04,729 | INFO     | -- intersect: 108320495849.66608
[2025-05-30 13:18:19] 2025-05-30 17:18:04,730 | INFO     | current memory leak: -61.94 B/s (using 85 data points, chi2=0.22)
[2025-05-30 13:18:19] 2025-05-30 17:18:04,730 | INFO     | ..............................
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . Timing measurements:
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . get job = 0 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . initial setup = 2 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . payload setup = 6 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . stage-in = 0 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . payload execution = 5577 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . stage-out = 0 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | . log creation = 0 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,731 | INFO     | ..............................
[2025-05-30 13:18:19] 2025-05-30 17:18:04,867 | INFO     | 
[2025-05-30 13:18:19] 2025-05-30 17:18:04,867 | INFO     | job summary report
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | --------------------------------------------------
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | PanDA job id: 6668231876
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | task id: 44871837
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | errors: (none)
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | pilot state: finished 
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | transexitcode: 0
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | exeerrorcode: 0
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | exeerrordiag: 
[2025-05-30 13:18:19] 2025-05-30 17:18:04,868 | INFO     | exitcode: 0
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | exitmsg: OK
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | cpuconsumptiontime: 47784 s
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | nevents: 400
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | neventsw: 0
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | pid: 3574611
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | pgrp: 3574611
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | corecount: 12
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | event service: False
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | sizes: {0: 2405232, 5: 2405438, 11: 2405494, 5588: 2431989, 5589: 2440930, 5591: 2440986, 5598: 2441284}
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | --------------------------------------------------
[2025-05-30 13:18:19] 2025-05-30 17:18:04,869 | INFO     | 
[2025-05-30 13:18:19] 2025-05-30 17:18:04,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-30 13:18:19] 2025-05-30 17:18:04,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,894 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 13:18:19] 2025-05-30 17:18:04,895 | INFO     | job 6668231876 has completed (purged errors)
[2025-05-30 13:18:19] 2025-05-30 17:18:04,895 | INFO     | overall cleanup function is called
[2025-05-30 13:18:19] 2025-05-30 17:18:05,904 | INFO     | --- collectZombieJob: --- 10, [3574611]
[2025-05-30 13:18:19] 2025-05-30 17:18:05,904 | INFO     | zombie collector waiting for pid 3574611
[2025-05-30 13:18:19] 2025-05-30 17:18:05,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 13:18:19] 2025-05-30 17:18:05,905 | INFO     | collected zombie processes
[2025-05-30 13:18:19] 2025-05-30 17:18:05,905 | INFO     | will attempt to kill all subprocesses of pid=3574611
[2025-05-30 13:18:19] 2025-05-30 17:18:06,121 | INFO     | process IDs to be killed: [3574611] (in reverse order)
[2025-05-30 13:18:19] 2025-05-30 17:18:06,219 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 13:18:19] 2025-05-30 17:18:06,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 13:18:19] 2025-05-30 17:18:06,234 | INFO     | did not find any defunct processes belonging to 3574611
[2025-05-30 13:18:19] 2025-05-30 17:18:06,245 | INFO     | did not find any defunct processes belonging to 3574611
[2025-05-30 13:18:19] 2025-05-30 17:18:06,246 | INFO     | ready for new job
[2025-05-30 13:18:19] 2025-05-30 17:18:06,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 13:18:19] 2025-05-30 17:18:06,249 | INFO     | **************************************
[2025-05-30 13:18:19] 2025-05-30 17:18:06,249 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 13:18:19] 2025-05-30 17:18:06,249 | INFO     | **************************************
[2025-05-30 13:18:19] 2025-05-30 17:18:06,250 | INFO     | 
[2025-05-30 13:18:19] 2025-05-30 17:18:06,265 | INFO     | architecture information:
[2025-05-30 13:18:19] 2025-05-30 17:18:06,266 | INFO     | executing command: cat /etc/os-release
[2025-05-30 13:18:19] 2025-05-30 17:18:06,281 | INFO     | cat /etc/os-release:
[2025-05-30 13:18:19] NAME="CentOS Linux"
[2025-05-30 13:18:19] VERSION="7 (Core)"
[2025-05-30 13:18:19] ID="centos"
[2025-05-30 13:18:19] ID_LIKE="rhel fedora"
[2025-05-30 13:18:19] VERSION_ID="7"
[2025-05-30 13:18:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 13:18:19] ANSI_COLOR="0;31"
[2025-05-30 13:18:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 13:18:19] HOME_URL="https://www.centos.org/"
[2025-05-30 13:18:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 13:18:19] 
[2025-05-30 13:18:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 13:18:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 13:18:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 13:18:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 13:18:19] 
[2025-05-30 13:18:19] 2025-05-30 17:18:06,281 | INFO     | **************************************
[2025-05-30 13:18:19] 2025-05-30 17:18:06,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-30 13:18:19] 2025-05-30 17:18:06,805 | INFO     | sufficient remaining disk space (75516346368 B)
[2025-05-30 13:18:19] 2025-05-30 17:18:06,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 13:18:19] 2025-05-30 17:18:06,805 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 13:18:19] 2025-05-30 17:18:06,805 | INFO     | update_server=False
[2025-05-30 13:18:19] 2025-05-30 17:18:06,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 13:18:19] 2025-05-30 17:18:06,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:18:19] 2025-05-30 17:18:06,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:18:19] 2025-05-30 17:18:06,806 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 13:18:19] 2025-05-30 17:18:06,807 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 13:18:19] 2025-05-30 17:18:06,807 | INFO     | aborting loop
[2025-05-30 13:18:19] 2025-05-30 17:18:06,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 13:18:19] 2025-05-30 17:18:06,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 13:18:19] 2025-05-30 17:18:06,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 13:18:19] 2025-05-30 17:18:07,565 | INFO     | all data control threads have been joined
[2025-05-30 13:18:19] 2025-05-30 17:18:07,659 | INFO     | all payload control threads have been joined
[2025-05-30 13:18:19] 2025-05-30 17:18:07,760 | INFO     | all job control threads have been joined
[2025-05-30 13:18:19] 2025-05-30 17:18:07,812 | INFO     | [job] retrieve thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:07,812 | INFO     | [job] queue monitor thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:07,813 | INFO     | [job] job monitor thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,073 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,186 | INFO     | [data] copytool_in thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,244 | INFO     | [payload] failed_post thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,325 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,570 | INFO     | [data] control thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 13:18:19] 2025-05-30 17:18:08,664 | INFO     | [payload] control thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,766 | INFO     | [job] control thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,814 | INFO     | [data] copytool_out thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,928 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:08,981 | INFO     | [payload] validate_post thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:09,114 | INFO     | [job] validate thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:12,614 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 13:18:19] 2025-05-30 17:18:14,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837528155968)>', '<ExcThread(monitor, started 139836820289280)>']
[2025-05-30 13:18:19] 2025-05-30 17:18:14,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 13:18:19] 2025-05-30 17:18:14,849 | INFO     | [monitor] control thread has ended
[2025-05-30 13:18:19] 2025-05-30 17:18:19,032 | INFO     | all workflow threads have been joined
[2025-05-30 13:18:19] 2025-05-30 17:18:19,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 13:18:19] 2025-05-30 17:18:19,033 | INFO     | traces error code: 0
[2025-05-30 13:18:19] 2025-05-30 17:18:19,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 13:18:19] 2025-05-30 17:18:19,224 [wrapper] ==== pilot stdout END ====
[2025-05-30 13:18:19] 2025-05-30 17:18:19,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 13:18:19] 2025-05-30 17:18:19,230 [wrapper] pilotpid: 3567697
[2025-05-30 13:18:19] 2025-05-30 17:18:19,234 [wrapper] Pilot exit status: 0
[2025-05-30 13:18:19] 2025-05-30 17:18:19,246 [wrapper] pandaids: 6668231876
[2025-05-30 13:18:19] 2025-05-30 17:18:19,308 [wrapper] cleanup supervisor_pilot 3917349 3567698
[2025-05-30 13:18:19] 2025-05-30 17:18:19,312 [wrapper] Test setup, not cleaning
[2025-05-30 13:18:19] 2025-05-30 17:18:19,316 [wrapper] apfmon messages muted
[2025-05-30 13:18:19] 2025-05-30 17:18:19,319 [wrapper] ==== wrapper stdout END ====
[2025-05-30 13:18:19] 2025-05-30 17:18:19,322 [wrapper] ==== wrapper stderr END ====
[2025-05-30 13:18:19]  *** Error codes and diagnostics ***
[2025-05-30 13:18:19]     "exeErrorCode": 0,
[2025-05-30 13:18:19]     "exeErrorDiag": "",
[2025-05-30 13:18:19]     "pilotErrorCode": 0,
[2025-05-30 13:18:19]     "pilotErrorDiag": "",
[2025-05-30 13:18:19]  *** Listing of results directory ***
[2025-05-30 13:18:19] total 417260
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:01 pilot3.tar.gz
[2025-05-30 13:18:19] -rwx------. 1 boincer umatlas     37140 May 28 04:09 runpilot2-wrapper.sh
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:09 queuedata.json
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas       100 May 30 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 13:18:19] -rwxr-xr-x. 1 boincer umatlas      7986 May 30 11:44 run_atlas
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas       105 May 30 11:44 job.xml
[2025-05-30 13:18:19] -rw-r--r--. 2 boincer umatlas 227860537 May 30 11:44 EVNT.44871834._003165.pool.root.1
[2025-05-30 13:18:19] -rw-r--r--. 2 boincer umatlas     15093 May 30 11:44 start_atlas.sh
[2025-05-30 13:18:19] drwxrwx--x. 2 boincer umatlas      4096 May 30 11:44 shared
[2025-05-30 13:18:19] -rw-r--r--. 2 boincer umatlas    508874 May 30 11:44 input.tar.gz
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas         0 May 30 11:44 boinc_lockfile
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas      2558 May 30 11:44 pandaJob.out
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas    987377 May 30 11:44 agis_schedconf.cvmfs.json
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas   1603667 May 30 11:44 agis_ddmendpoints.agis.ALL.json
[2025-05-30 13:18:19] drwx------. 4 boincer umatlas      4096 May 30 11:44 pilot3
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas      6841 May 30 13:13 init_data.xml
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas        95 May 30 13:17 pilot_heartbeat.json
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas 193786815 May 30 13:17 HITS.44871837._081055.pool.root.1
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas       530 May 30 13:17 boinc_task_state.xml
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas      1041 May 30 13:17 memory_monitor_summary.json
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas    362441 May 30 13:17 log.44871837._081055.job.log.tgz.1
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas      7724 May 30 13:18 heartbeat.json
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas      8192 May 30 13:18 boinc_mmap_file
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas        27 May 30 13:18 wrapper_checkpoint.txt
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas      4476 May 30 13:18 pilotlog.txt
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas    532197 May 30 13:18 log.44871837._081055.job.log.1
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas       357 May 30 13:18 output.list
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas       620 May 30 13:18 runtime_log
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas    911360 May 30 13:18 result.tar.gz
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas      8666 May 30 13:18 runtime_log.err
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas       654 May 30 13:18 RPnLDm11Qe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNBTKDmOhaDin.diag
[2025-05-30 13:18:19] -rw-r--r--. 1 boincer umatlas     21357 May 30 13:18 stderr.txt
[2025-05-30 13:18:19] HITS file was successfully produced:
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas 193786815 May 30 13:17 shared/HITS.pool.root.1
[2025-05-30 13:18:19]  *** Contents of shared directory: ***
[2025-05-30 13:18:19] total 413184
[2025-05-30 13:18:19] -rw-r--r--. 2 boincer umatlas 227860537 May 30 11:44 ATLAS.root_0
[2025-05-30 13:18:19] -rw-r--r--. 2 boincer umatlas     15093 May 30 11:44 start_atlas.sh
[2025-05-30 13:18:19] -rw-r--r--. 2 boincer umatlas    508874 May 30 11:44 input.tar.gz
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas 193786815 May 30 13:17 HITS.pool.root.1
[2025-05-30 13:18:19] -rw-------. 1 boincer umatlas    911360 May 30 13:18 result.tar.gz
13:18:21 (3563297): run_atlas exited; CPU time 47870.715964
13:18:21 (3563297): called boinc_finish(0)

</stderr_txt>
]]>

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