Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:52:47 (41154): wrapper (7.7.26015): starting
03:52:47 (41154): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 03:52:47] Arguments: --nthreads 8
[2025-05-30 03:52:47] Threads: 8
[2025-05-30 03:52:47] Checking for CVMFS
[2025-05-30 03:52:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 03:52:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 03:52:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 03:52:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 03:52:48] 2.11.2.0 3220 101524 315816 146591 2 398 16616280 18432001 10587 130560 0 464747106 99.112 904523180 34485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-30 03:52:48] CVMFS is ok
[2025-05-30 03:52:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 03:52:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 03:52:48] Further information can be found at the LHC@home message board.
[2025-05-30 03:52:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 03:52:48] Checking for apptainer binary...
[2025-05-30 03:52:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 03:52:48] Running /usr/bin/apptainer --version
[2025-05-30 03:52:48] apptainer version 1.3.2-1.el7
[2025-05-30 03:52:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 03:52:51] c-211-11.aglt2.org
[2025-05-30 03:52:51] apptainer works
[2025-05-30 03:52:51] Set ATHENA_PROC_NUMBER=8
[2025-05-30 03:52:51] Set ATHENA_CORE_NUMBER=8
[2025-05-30 03:52:51] Starting ATLAS job with PandaID=6673368449
[2025-05-30 03:52:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:00:04 (41154): BOINC client no longer exists - exiting
10:00:04 (41154): timer handler: client dead, exiting
10:10:05 (1684): wrapper (7.7.26015): starting
10:10:05 (1684): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 10:10:05] Arguments: --nthreads 8
[2025-05-30 10:10:05] Threads: 8
[2025-05-30 10:10:05] This job has been restarted, cleaning up previous attempt
[2025-05-30 10:10:05] Checking for CVMFS
[2025-05-30 10:10:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 10:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 10:10:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 10:10:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 10:10:06] 2.11.2.0 3220 101901 309280 146601 1 26 17011695 18432001 7809 130560 0 465297421 99.110 906491885 34495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-30 10:10:06] CVMFS is ok
[2025-05-30 10:10:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 10:10:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 10:10:06] Further information can be found at the LHC@home message board.
[2025-05-30 10:10:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 10:10:06] Checking for apptainer binary...
[2025-05-30 10:10:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 10:10:06] Running /usr/bin/apptainer --version
[2025-05-30 10:10:06] apptainer version 1.3.2-1.el7
[2025-05-30 10:10:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 10:10:07] c-211-11.aglt2.org
[2025-05-30 10:10:07] apptainer works
[2025-05-30 10:10:07] Set ATHENA_PROC_NUMBER=8
[2025-05-30 10:10:07] Set ATHENA_CORE_NUMBER=8
[2025-05-30 10:10:07] Starting ATLAS job with PandaID=6673368449
[2025-05-30 10:10:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-31 03:08:09]  *** The last 200 lines of the pilot log: ***
[2025-05-31 03:08:09] 2025-05-31 07:07:43,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-31 03:08:09] 2025-05-31 07:07:43,345 | INFO     | fitting pss+swap vs Time
[2025-05-31 03:08:09] 2025-05-31 07:07:43,349 | INFO     | sum of square deviations: 309156972447.9973
[2025-05-31 03:08:09] 2025-05-31 07:07:43,485 | INFO     | sum of deviations: 206384069337.9811
[2025-05-31 03:08:09] 2025-05-31 07:07:43,486 | INFO     | mean x: 1748644715.1871872
[2025-05-31 03:08:09] 2025-05-31 07:07:43,486 | INFO     | mean y: 2474011.139139139
[2025-05-31 03:08:09] 2025-05-31 07:07:43,486 | INFO     | -- intersect: -1164869585.5102675
[2025-05-31 03:08:09] 2025-05-31 07:07:43,486 | INFO     | intersect: -1164869585.5102675
[2025-05-31 03:08:09] 2025-05-31 07:07:43,490 | INFO     | chi2: 5.182899317744624
[2025-05-31 03:08:09] 2025-05-31 07:07:43,494 | INFO     | sum of square deviations: 304538456294.18616
[2025-05-31 03:08:09] 2025-05-31 07:07:43,602 | INFO     | sum of deviations: 473230126980.69763
[2025-05-31 03:08:09] 2025-05-31 07:07:43,603 | INFO     | mean x: 1748644562.6911469
[2025-05-31 03:08:09] 2025-05-31 07:07:43,603 | INFO     | mean y: 2482813.204225352
[2025-05-31 03:08:09] 2025-05-31 07:07:43,603 | INFO     | -- intersect: -2714780873.3466005
[2025-05-31 03:08:09] 2025-05-31 07:07:43,603 | INFO     | intersect: -2714780873.3466005
[2025-05-31 03:08:09] 2025-05-31 07:07:43,607 | INFO     | chi2: 1.9923160762562255
[2025-05-31 03:08:09] 2025-05-31 07:07:43,607 | INFO     | current chi2=1.9923160762562255 (change=61.559815190020004 %)
[2025-05-31 03:08:09] 2025-05-31 07:07:43,611 | INFO     | sum of square deviations: 299965991301.4987
[2025-05-31 03:08:09] 2025-05-31 07:07:43,702 | INFO     | sum of deviations: 470403240651.79254
[2025-05-31 03:08:09] 2025-05-31 07:07:43,702 | INFO     | mean x: 1748644410.1921132
[2025-05-31 03:08:09] 2025-05-31 07:07:43,702 | INFO     | mean y: 2482718.9221435795
[2025-05-31 03:08:09] 2025-05-31 07:07:43,702 | INFO     | -- intersect: -2739721468.0693126
[2025-05-31 03:08:09] 2025-05-31 07:07:43,703 | INFO     | intersect: -2739721468.0693126
[2025-05-31 03:08:09] 2025-05-31 07:07:43,706 | INFO     | chi2: 1.9920857003860608
[2025-05-31 03:08:09] 2025-05-31 07:07:43,706 | INFO     | current chi2=1.9920857003860608 (change=0.011563218954575911 %)
[2025-05-31 03:08:09] 2025-05-31 07:07:43,707 | INFO     | right removable region: 988
[2025-05-31 03:08:09] 2025-05-31 07:07:43,710 | INFO     | sum of square deviations: 304537915283.7986
[2025-05-31 03:08:09] 2025-05-31 07:07:43,947 | INFO     | sum of deviations: 10765304849.903366
[2025-05-31 03:08:09] 2025-05-31 07:07:43,947 | INFO     | mean x: 1748644867.692153
[2025-05-31 03:08:09] 2025-05-31 07:07:43,947 | INFO     | mean y: 2480460.3722334006
[2025-05-31 03:08:09] 2025-05-31 07:07:43,947 | INFO     | -- intersect: -59333501.47019351
[2025-05-31 03:08:09] 2025-05-31 07:07:43,947 | INFO     | intersect: -59333501.47019351
[2025-05-31 03:08:09] 2025-05-31 07:07:43,977 | INFO     | chi2: 3.4546491176232457
[2025-05-31 03:08:09] 2025-05-31 07:07:43,977 | INFO     | current chi2=3.4546491176232457 (change=33.34523968475311 %)
[2025-05-31 03:08:09] 2025-05-31 07:07:43,981 | INFO     | sum of square deviations: 299965091544.55164
[2025-05-31 03:08:09] 2025-05-31 07:07:44,098 | INFO     | sum of deviations: -59041620962.90205
[2025-05-31 03:08:09] 2025-05-31 07:07:44,098 | INFO     | mean x: 1748645020.1971688
[2025-05-31 03:08:09] 2025-05-31 07:07:44,099 | INFO     | mean y: 2482786.9635995957
[2025-05-31 03:08:09] 2025-05-31 07:07:44,099 | INFO     | -- intersect: 346665624.8716351
[2025-05-31 03:08:09] 2025-05-31 07:07:44,099 | INFO     | intersect: 346665624.8716351
[2025-05-31 03:08:09] 2025-05-31 07:07:44,125 | INFO     | chi2: 3.281399105646104
[2025-05-31 03:08:09] 2025-05-31 07:07:44,125 | INFO     | current chi2=3.281399105646104 (change=5.014981437429907 %)
[2025-05-31 03:08:09] 2025-05-31 07:07:44,125 | INFO     | left removable region: 20
[2025-05-31 03:08:09] 2025-05-31 07:07:44,212 | INFO     | sum of square deviations: 281259831685.00757
[2025-05-31 03:08:09] 2025-05-31 07:07:44,280 | INFO     | monitor loop #3165: job 0:6673368449 is in state 'finished'
[2025-05-31 03:08:09] 2025-05-31 07:07:44,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-31 03:08:09] 2025-05-31 07:07:44,567 | INFO     | sum of deviations: 155375769453.45474
[2025-05-31 03:08:09] 2025-05-31 07:07:44,567 | INFO     | mean x: 1748644989.710744
[2025-05-31 03:08:09] 2025-05-31 07:07:44,567 | INFO     | mean y: 2493364.965909091
[2025-05-31 03:08:09] 2025-05-31 07:07:44,568 | INFO     | -- intersect: -963506860.3400565
[2025-05-31 03:08:09] 2025-05-31 07:07:44,571 | INFO     | intersect: -963506860.3400565
[2025-05-31 03:08:09] 2025-05-31 07:07:44,581 | INFO     | chi2: 0.008921695167999823
[2025-05-31 03:08:09] 2025-05-31 07:07:44,581 | INFO     | -- intersect: -963506860.3400565
[2025-05-31 03:08:09] 2025-05-31 07:07:44,581 | INFO     | current memory leak: 0.55 B/s (using 968 data points, chi2=0.01)
[2025-05-31 03:08:09] 2025-05-31 07:07:44,586 | INFO     | ..............................
[2025-05-31 03:08:09] 2025-05-31 07:07:44,587 | INFO     | . Timing measurements:
[2025-05-31 03:08:09] 2025-05-31 07:07:44,587 | INFO     | . get job = 0 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,587 | INFO     | . initial setup = 2 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,587 | INFO     | . payload setup = 10 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,587 | INFO     | . stage-in = 0 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,588 | INFO     | . payload execution = 60907 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,590 | INFO     | . stage-out = 9 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,590 | INFO     | . log creation = 2 s
[2025-05-31 03:08:09] 2025-05-31 07:07:44,590 | INFO     | ..............................
[2025-05-31 03:08:09] 2025-05-31 07:07:45,479 | INFO     | 
[2025-05-31 03:08:09] 2025-05-31 07:07:45,479 | INFO     | job summary report
[2025-05-31 03:08:09] 2025-05-31 07:07:45,479 | INFO     | --------------------------------------------------
[2025-05-31 03:08:09] 2025-05-31 07:07:45,479 | INFO     | PanDA job id: 6673368449
[2025-05-31 03:08:09] 2025-05-31 07:07:45,479 | INFO     | task id: 44871837
[2025-05-31 03:08:09] 2025-05-31 07:07:45,479 | INFO     | errors: (none)
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | pilot state: finished 
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | transexitcode: 0
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | exeerrorcode: 0
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | exeerrordiag: 
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | exitcode: 0
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | exitmsg: OK
[2025-05-31 03:08:09] 2025-05-31 07:07:45,480 | INFO     | cpuconsumptiontime: 82629 s
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | nevents: 400
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | neventsw: 0
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | pid: 41107
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | pgrp: 41107
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | corecount: 8
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | event service: False
[2025-05-31 03:08:09] 2025-05-31 07:07:45,481 | INFO     | sizes: {0: 2405233, 7: 2405439, 11: 2405467, 60924: 2455493, 60925: 2455492, 60936: 2464489, 60940: 2464673, 61014: 2464843}
[2025-05-31 03:08:09] 2025-05-31 07:07:45,482 | INFO     | --------------------------------------------------
[2025-05-31 03:08:09] 2025-05-31 07:07:45,482 | INFO     | 
[2025-05-31 03:08:09] 2025-05-31 07:07:45,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-31 03:08:09] 2025-05-31 07:07:45,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-31 03:08:09] 2025-05-31 07:07:45,904 | INFO     | job 6673368449 has completed (purged errors)
[2025-05-31 03:08:09] 2025-05-31 07:07:45,905 | INFO     | overall cleanup function is called
[2025-05-31 03:08:09] 2025-05-31 07:07:46,354 | INFO     | PID=15046 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-31 03:08:09] 2025-05-31 07:07:46,355 | INFO     | .. there are 15 such processes running
[2025-05-31 03:08:09] 2025-05-31 07:07:46,968 | INFO     | --- collectZombieJob: --- 10, [41107]
[2025-05-31 03:08:09] 2025-05-31 07:07:46,986 | INFO     | zombie collector waiting for pid 41107
[2025-05-31 03:08:09] 2025-05-31 07:07:46,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-31 03:08:09] 2025-05-31 07:07:46,986 | INFO     | collected zombie processes
[2025-05-31 03:08:09] 2025-05-31 07:07:46,986 | INFO     | will attempt to kill all subprocesses of pid=41107
[2025-05-31 03:08:09] 2025-05-31 07:07:48,075 | INFO     | process IDs to be killed: [41107] (in reverse order)
[2025-05-31 03:08:09] 2025-05-31 07:07:50,401 | WARNING  | found no corresponding commands to process id(s)
[2025-05-31 03:08:09] 2025-05-31 07:07:50,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-31 03:08:09] 2025-05-31 07:07:50,499 | INFO     | did not find any defunct processes belonging to 41107
[2025-05-31 03:08:09] 2025-05-31 07:07:50,614 | INFO     | did not find any defunct processes belonging to 41107
[2025-05-31 03:08:09] 2025-05-31 07:07:50,614 | INFO     | ready for new job
[2025-05-31 03:08:09] 2025-05-31 07:07:50,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-31 03:08:09] 2025-05-31 07:07:50,649 | INFO     | **************************************
[2025-05-31 03:08:09] 2025-05-31 07:07:50,649 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-31 03:08:09] 2025-05-31 07:07:50,649 | INFO     | **************************************
[2025-05-31 03:08:09] 2025-05-31 07:07:50,650 | INFO     | 
[2025-05-31 03:08:09] 2025-05-31 07:07:50,684 | INFO     | architecture information:
[2025-05-31 03:08:09] 2025-05-31 07:07:50,723 | INFO     | executing command: cat /etc/os-release
[2025-05-31 03:08:09] 2025-05-31 07:07:51,080 | INFO     | cat /etc/os-release:
[2025-05-31 03:08:09] NAME="CentOS Linux"
[2025-05-31 03:08:09] VERSION="7 (Core)"
[2025-05-31 03:08:09] ID="centos"
[2025-05-31 03:08:09] ID_LIKE="rhel fedora"
[2025-05-31 03:08:09] VERSION_ID="7"
[2025-05-31 03:08:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-31 03:08:09] ANSI_COLOR="0;31"
[2025-05-31 03:08:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-31 03:08:09] HOME_URL="https://www.centos.org/"
[2025-05-31 03:08:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-31 03:08:09] 
[2025-05-31 03:08:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-31 03:08:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-31 03:08:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-31 03:08:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-31 03:08:09] 
[2025-05-31 03:08:09] 2025-05-31 07:07:51,080 | INFO     | **************************************
[2025-05-31 03:08:09] 2025-05-31 07:07:51,584 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-31 03:08:09] 2025-05-31 07:07:51,727 | INFO     | sufficient remaining disk space (56420728832 B)
[2025-05-31 03:08:09] 2025-05-31 07:07:51,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-31 03:08:09] 2025-05-31 07:07:51,728 | INFO     | current server update state: UPDATING_FINAL
[2025-05-31 03:08:09] 2025-05-31 07:07:51,728 | INFO     | update_server=False
[2025-05-31 03:08:09] 2025-05-31 07:07:51,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-31 03:08:09] 2025-05-31 07:07:51,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-31 03:08:09] 2025-05-31 07:07:51,863 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-31 03:08:09] 2025-05-31 07:07:51,863 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-31 03:08:09] 2025-05-31 07:07:51,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-31 03:08:09] 2025-05-31 07:07:51,863 | INFO     | will abort loop
[2025-05-31 03:08:09] 2025-05-31 07:07:52,026 | INFO     | all job control threads have been joined
[2025-05-31 03:08:09] 2025-05-31 07:07:52,373 | INFO     | all data control threads have been joined
[2025-05-31 03:08:09] 2025-05-31 07:07:52,385 | INFO     | found 0 job(s) in 20 queues
[2025-05-31 03:08:09] 2025-05-31 07:07:52,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-31 03:08:09] 2025-05-31 07:07:52,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-31 03:08:09] 2025-05-31 07:07:52,734 | INFO     | [job] retrieve thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:52,869 | INFO     | [job] job monitor thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:53,043 | INFO     | [job] control thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:53,135 | INFO     | all payload control threads have been joined
[2025-05-31 03:08:09] 2025-05-31 07:07:53,379 | INFO     | [data] control thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:53,735 | INFO     | [data] copytool_out thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:53,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,141 | INFO     | [payload] control thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,193 | INFO     | [payload] validate_pre thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,200 | INFO     | [job] validate thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,202 | INFO     | [job] create_data_payload thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,208 | INFO     | [payload] execute_payloads thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,210 | INFO     | [payload] failed_post thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,222 | INFO     | [data] copytool_in thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,315 | INFO     | [payload] validate_post thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:54,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-31 03:08:09] 2025-05-31 07:07:54,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-31 03:08:09] 2025-05-31 07:07:55,584 | INFO     | [job] queue monitor thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:07:58,385 | INFO     | [data] queue_monitor thread has finished
[2025-05-31 03:08:09] 2025-05-31 07:08:00,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361704073024)>', '<ExcThread(monitor, started 140361125058304)>']
[2025-05-31 03:08:09] 2025-05-31 07:08:01,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-31 03:08:09] 2025-05-31 07:08:01,447 | INFO     | [monitor] control thread has ended
[2025-05-31 03:08:09] 2025-05-31 07:08:05,505 | INFO     | all workflow threads have been joined
[2025-05-31 03:08:09] 2025-05-31 07:08:05,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-31 03:08:09] 2025-05-31 07:08:05,505 | INFO     | traces error code: 0
[2025-05-31 03:08:09] 2025-05-31 07:08:05,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-31 03:08:09] 2025-05-31 07:08:06,795 [wrapper] ==== pilot stdout END ====
[2025-05-31 03:08:09] 2025-05-31 07:08:06,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-31 03:08:09] 2025-05-31 07:08:06,852 [wrapper] pilotpid: 15046
[2025-05-31 03:08:09] 2025-05-31 07:08:06,890 [wrapper] Pilot exit status: 0
[2025-05-31 03:08:09] 2025-05-31 07:08:07,000 [wrapper] pandaids: 6673368449 6673368449
[2025-05-31 03:08:09] 2025-05-31 07:08:07,940 [wrapper] cleanup supervisor_pilot 29472 15047
[2025-05-31 03:08:09] 2025-05-31 07:08:07,994 [wrapper] Test setup, not cleaning
[2025-05-31 03:08:09] 2025-05-31 07:08:08,039 [wrapper] apfmon messages muted
[2025-05-31 03:08:09] 2025-05-31 07:08:08,082 [wrapper] ==== wrapper stdout END ====
[2025-05-31 03:08:09] 2025-05-31 07:08:08,109 [wrapper] ==== wrapper stderr END ====
[2025-05-31 03:08:09]  *** Error codes and diagnostics ***
[2025-05-31 03:08:09]     "exeErrorCode": 0,
[2025-05-31 03:08:09]     "exeErrorDiag": "",
[2025-05-31 03:08:09]     "pilotErrorCode": 0,
[2025-05-31 03:08:09]     "pilotErrorDiag": "",
[2025-05-31 03:08:09]  *** Listing of results directory ***
[2025-05-31 03:08:09] total 642476
[2025-05-31 03:08:09] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas    495897 May 30 03:46 pilot3.tar.gz
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas      5111 May 30 03:51 queuedata.json
[2025-05-31 03:08:09] -rwx------ 1 boincer umatlas     37140 May 30 03:52 runpilot2-wrapper.sh
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas       100 May 30 03:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-31 03:08:09] -rwxr-xr-x 1 boincer umatlas      7986 May 30 03:52 run_atlas
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas       105 May 30 03:52 job.xml
[2025-05-31 03:08:09] -rw-r--r-- 3 boincer umatlas 223507388 May 30 03:52 EVNT.44871834._003189.pool.root.1
[2025-05-31 03:08:09] -rw-r--r-- 3 boincer umatlas 223507388 May 30 03:52 ATLAS.root_0
[2025-05-31 03:08:09] -rw-r--r-- 2 boincer umatlas     15093 May 30 03:52 start_atlas.sh
[2025-05-31 03:08:09] drwxrwx--x 2 boincer umatlas      4096 May 30 03:52 shared
[2025-05-31 03:08:09] -rw-r--r-- 2 boincer umatlas    508882 May 30 03:52 input.tar.gz
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas         0 May 30 03:52 boinc_lockfile
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas      2558 May 30 10:10 pandaJob.out
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas    988007 May 30 10:10 agis_schedconf.cvmfs.json
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas      6133 May 31 03:00 init_data.xml
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas 196737471 May 31 03:01 HITS.44871837._101721.pool.root.1
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas       532 May 31 03:02 boinc_task_state.xml
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas      1061 May 31 03:06 memory_monitor_summary.json
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas   1603667 May 31 03:06 agis_ddmendpoints.agis.ALL.json
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas    760097 May 31 03:06 log.44871837._101721.job.log.tgz.1
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas      8192 May 31 03:07 boinc_mmap_file
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas        29 May 31 03:07 wrapper_checkpoint.txt
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas      7758 May 31 03:07 heartbeat.json
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas        96 May 31 03:07 pilot_heartbeat.json
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas      4539 May 31 03:08 pilotlog.txt
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas   4390508 May 31 03:08 log.44871837._101721.job.log.1
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas       357 May 31 03:08 output.list
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas       620 May 31 03:08 runtime_log
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas   5171200 May 31 03:08 result.tar.gz
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas       790 May 31 03:08 XrINDmUi9e7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaleKDm3x1Ukn.diag
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas      8745 May 31 03:08 runtime_log.err
[2025-05-31 03:08:09] -rw-r--r-- 1 boincer umatlas     23299 May 31 03:08 stderr.txt
[2025-05-31 03:08:09] HITS file was successfully produced:
[2025-05-31 03:08:09] -rw------- 1 boincer umatlas 196737471 May 31 03:01 shared/HITS.pool.root.1
[2025-05-31 03:08:09]  *** Contents of shared directory: ***
[2025-05-31 03:08:10] total 415972
[2025-05-31 03:08:10] -rw-r--r-- 3 boincer umatlas 223507388 May 30 03:52 ATLAS.root_0
[2025-05-31 03:08:10] -rw-r--r-- 2 boincer umatlas     15093 May 30 03:52 start_atlas.sh
[2025-05-31 03:08:10] -rw-r--r-- 2 boincer umatlas    508882 May 30 03:52 input.tar.gz
[2025-05-31 03:08:10] -rw------- 1 boincer umatlas 196737471 May 31 03:01 HITS.pool.root.1
[2025-05-31 03:08:10] -rw------- 1 boincer umatlas   5171200 May 31 03:08 result.tar.gz
03:08:11 (1684): run_atlas exited; CPU time 84588.679129
03:08:11 (1684): called boinc_finish(0)

</stderr_txt>
]]>

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