Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:56 (701455): wrapper (7.7.26015): starting
01:20:56 (701455): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 01:20:56] Arguments: --nthreads 4
[2025-06-06 01:20:56] Threads: 4
[2025-06-06 01:20:56] Checking for CVMFS
[2025-06-06 01:20:56] No cvmfs_config command found, will try listing directly
[2025-06-06 01:20:56] CVMFS is ok
[2025-06-06 01:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:20:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:20:56] Further information can be found at the LHC@home message board.
[2025-06-06 01:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:20:56] Checking for apptainer binary...
[2025-06-06 01:20:56] which: no apptainer in ((null))
[2025-06-06 01:20:56] apptainer is not installed, using version from CVMFS
[2025-06-06 01:20:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:20:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-06-06 01:20:56] apptainer works
[2025-06-06 01:20:56] Set ATHENA_PROC_NUMBER=4
[2025-06-06 01:20:56] Set ATHENA_CORE_NUMBER=4
[2025-06-06 01:20:56] Starting ATLAS job with PandaID=6671578043
[2025-06-06 01:20:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:52:41]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:52:41] 2025-06-06 03:52:00,141 | INFO     | executing command: lscpu
[2025-06-06 05:52:41] 2025-06-06 03:52:00,171 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:52:41] 2025-06-06 03:52:01,062 | INFO     | PID=705154 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 05:52:41] 2025-06-06 03:52:01,062 | INFO     | .. there are 3 such processes running
[2025-06-06 05:52:41] 2025-06-06 03:52:02,299 | INFO     | monitor loop #1190: job 0:6671578043 is in state 'finished'
[2025-06-06 05:52:41] 2025-06-06 03:52:02,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,504 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 05:52:41] 2025-06-06 03:52:03,504 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6671578043/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,505 | INFO     | extracted standard info from prmon json
[2025-06-06 05:52:41] 2025-06-06 03:52:03,505 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:52:41] 2025-06-06 03:52:03,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:52:41] 2025-06-06 03:52:03,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:52:41] 2025-06-06 03:52:03,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:52:41] 2025-06-06 03:52:03,512 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:52:41] 2025-06-06 03:52:03,512 | INFO     | sum of square deviations: 5836025702.5
[2025-06-06 05:52:41] 2025-06-06 03:52:03,515 | INFO     | sum of deviations: -70304402041.00002
[2025-06-06 05:52:41] 2025-06-06 03:52:03,515 | INFO     | mean x: 1749173773.5
[2025-06-06 05:52:41] 2025-06-06 03:52:03,515 | INFO     | mean y: 2391154.060150376
[2025-06-06 05:52:41] 2025-06-06 03:52:03,515 | INFO     | -- intersect: 21074028340.140053
[2025-06-06 05:52:41] 2025-06-06 03:52:03,515 | INFO     | intersect: 21074028340.140053
[2025-06-06 05:52:41] 2025-06-06 03:52:03,516 | INFO     | chi2: 2.0998138684919097
[2025-06-06 05:52:41] 2025-06-06 03:52:03,516 | INFO     | sum of square deviations: 5513070810.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,518 | INFO     | sum of deviations: -68751474594.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,519 | INFO     | mean x: 1749173621.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,519 | INFO     | mean y: 2391887.785440613
[2025-06-06 05:52:41] 2025-06-06 03:52:03,519 | INFO     | -- intersect: 21815691573.061295
[2025-06-06 05:52:41] 2025-06-06 03:52:03,519 | INFO     | intersect: 21815691573.061295
[2025-06-06 05:52:41] 2025-06-06 03:52:03,519 | INFO     | chi2: 2.0934821281191955
[2025-06-06 05:52:41] 2025-06-06 03:52:03,520 | INFO     | current chi2=2.0934821281191955 (change=0.3015381728696544 %)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,520 | INFO     | right removable region: 260
[2025-06-06 05:52:41] 2025-06-06 03:52:03,520 | INFO     | sum of square deviations: 5513070810.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,522 | INFO     | sum of deviations: -109432454015.99998
[2025-06-06 05:52:41] 2025-06-06 03:52:03,523 | INFO     | mean x: 1749173926.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,523 | INFO     | mean y: 2409471.4482758623
[2025-06-06 05:52:41] 2025-06-06 03:52:03,523 | INFO     | -- intersect: 34722876851.58359
[2025-06-06 05:52:41] 2025-06-06 03:52:03,523 | INFO     | intersect: 34722876851.58359
[2025-06-06 05:52:41] 2025-06-06 03:52:03,523 | INFO     | chi2: 0.5681893406155861
[2025-06-06 05:52:41] 2025-06-06 03:52:03,524 | INFO     | current chi2=0.5681893406155861 (change=72.94096638081255 %)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,524 | INFO     | sum of square deviations: 5202255680.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,526 | INFO     | sum of deviations: -99348011760.5
[2025-06-06 05:52:41] 2025-06-06 03:52:03,526 | INFO     | mean x: 1749174078.5
[2025-06-06 05:52:41] 2025-06-06 03:52:03,526 | INFO     | mean y: 2404513.55078125
[2025-06-06 05:52:41] 2025-06-06 03:52:03,527 | INFO     | -- intersect: 33406561789.0309
[2025-06-06 05:52:41] 2025-06-06 03:52:03,527 | INFO     | intersect: 33406561789.0309
[2025-06-06 05:52:41] 2025-06-06 03:52:03,527 | INFO     | chi2: 0.5583054637834038
[2025-06-06 05:52:41] 2025-06-06 03:52:03,527 | INFO     | current chi2=0.5583054637834038 (change=1.7395392918624484 %)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,528 | INFO     | left removable region: 20
[2025-06-06 05:52:41] 2025-06-06 03:52:03,528 | INFO     | sum of square deviations: 4286517580.0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,530 | INFO     | sum of deviations: -73058685448.00002
[2025-06-06 05:52:41] 2025-06-06 03:52:03,530 | INFO     | mean x: 1749174200.5
[2025-06-06 05:52:41] 2025-06-06 03:52:03,530 | INFO     | mean y: 2392718.408333333
[2025-06-06 05:52:41] 2025-06-06 03:52:03,530 | INFO     | -- intersect: 29815023909.830254
[2025-06-06 05:52:41] 2025-06-06 03:52:03,530 | INFO     | intersect: 29815023909.830254
[2025-06-06 05:52:41] 2025-06-06 03:52:03,531 | INFO     | chi2: 0.500533158740624
[2025-06-06 05:52:41] 2025-06-06 03:52:03,531 | INFO     | -- intersect: 29815023909.830254
[2025-06-06 05:52:41] 2025-06-06 03:52:03,531 | INFO     | current memory leak: -17.04 B/s (using 240 data points, chi2=0.50)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,532 | INFO     | ..............................
[2025-06-06 05:52:41] 2025-06-06 03:52:03,532 | INFO     | . Timing measurements:
[2025-06-06 05:52:41] 2025-06-06 03:52:03,532 | INFO     | . get job = 0 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,532 | INFO     | . initial setup = 1 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,532 | INFO     | . payload setup = 6 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,533 | INFO     | . stage-in = 0 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,533 | INFO     | . payload execution = 16224 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,533 | INFO     | . stage-out = 1 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,533 | INFO     | . log creation = 0 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,533 | INFO     | ..............................
[2025-06-06 05:52:41] 2025-06-06 03:52:03,658 | INFO     | 
[2025-06-06 05:52:41] 2025-06-06 03:52:03,658 | INFO     | job summary report
[2025-06-06 05:52:41] 2025-06-06 03:52:03,658 | INFO     | --------------------------------------------------
[2025-06-06 05:52:41] 2025-06-06 03:52:03,658 | INFO     | PanDA job id: 6671578043
[2025-06-06 05:52:41] 2025-06-06 03:52:03,658 | INFO     | task id: 44871837
[2025-06-06 05:52:41] 2025-06-06 03:52:03,658 | INFO     | errors: (none)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | pilot state: finished 
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | transexitcode: 0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | exeerrorcode: 0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | exeerrordiag: 
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | exitcode: 0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | exitmsg: OK
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | cpuconsumptiontime: 62649 s
[2025-06-06 05:52:41] 2025-06-06 03:52:03,659 | INFO     | nevents: 400
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | neventsw: 0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | pid: 711925
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | pgrp: 711925
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | corecount: 4
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | event service: False
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 12: 2397643, 16234: 2428817, 16235: 2437780, 16238: 2437964, 16244: 2438134}
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | --------------------------------------------------
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | 
[2025-06-06 05:52:41] 2025-06-06 03:52:03,660 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 05:52:41] 2025-06-06 03:52:03,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:52:41] 2025-06-06 03:52:03,681 | INFO     | job 6671578043 has completed (purged errors)
[2025-06-06 05:52:41] 2025-06-06 03:52:03,681 | INFO     | overall cleanup function is called
[2025-06-06 05:52:41] 2025-06-06 03:52:04,689 | INFO     | --- collectZombieJob: --- 10, [711925]
[2025-06-06 05:52:41] 2025-06-06 03:52:04,689 | INFO     | zombie collector waiting for pid 711925
[2025-06-06 05:52:41] 2025-06-06 03:52:04,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:52:41] 2025-06-06 03:52:04,690 | INFO     | collected zombie processes
[2025-06-06 05:52:41] 2025-06-06 03:52:04,690 | INFO     | will attempt to kill all subprocesses of pid=711925
[2025-06-06 05:52:41] 2025-06-06 03:52:04,992 | INFO     | process IDs to be killed: [711925] (in reverse order)
[2025-06-06 05:52:41] 2025-06-06 03:52:05,062 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:52:41] 2025-06-06 03:52:05,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:52:41] 2025-06-06 03:52:05,069 | INFO     | did not find any defunct processes belonging to 711925
[2025-06-06 05:52:41] 2025-06-06 03:52:05,076 | INFO     | did not find any defunct processes belonging to 711925
[2025-06-06 05:52:41] 2025-06-06 03:52:05,076 | INFO     | ready for new job
[2025-06-06 05:52:41] 2025-06-06 03:52:05,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:52:41] 2025-06-06 03:52:05,078 | INFO     | **************************************
[2025-06-06 05:52:41] 2025-06-06 03:52:05,078 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:52:41] 2025-06-06 03:52:05,078 | INFO     | **************************************
[2025-06-06 05:52:41] 2025-06-06 03:52:05,079 | INFO     | 
[2025-06-06 05:52:41] 2025-06-06 03:52:05,081 | INFO     | architecture information:
[2025-06-06 05:52:41] 2025-06-06 03:52:05,081 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:52:41] 2025-06-06 03:52:05,094 | INFO     | cat /etc/os-release:
[2025-06-06 05:52:41] NAME="CentOS Linux"
[2025-06-06 05:52:41] VERSION="7 (Core)"
[2025-06-06 05:52:41] ID="centos"
[2025-06-06 05:52:41] ID_LIKE="rhel fedora"
[2025-06-06 05:52:41] VERSION_ID="7"
[2025-06-06 05:52:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:52:41] ANSI_COLOR="0;31"
[2025-06-06 05:52:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:52:41] HOME_URL="https://www.centos.org/"
[2025-06-06 05:52:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:52:41] 
[2025-06-06 05:52:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:52:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:52:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:52:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:52:41] 
[2025-06-06 05:52:41] 2025-06-06 03:52:05,094 | INFO     | **************************************
[2025-06-06 05:52:41] 2025-06-06 03:52:05,596 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 05:52:41] 2025-06-06 03:52:05,606 | INFO     | sufficient remaining disk space (1651578503168 B)
[2025-06-06 05:52:41] 2025-06-06 03:52:05,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:52:41] 2025-06-06 03:52:05,607 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:52:41] 2025-06-06 03:52:05,607 | INFO     | update_server=False
[2025-06-06 05:52:41] 2025-06-06 03:52:05,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:52:41] 2025-06-06 03:52:05,607 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:52:41] 2025-06-06 03:52:05,607 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:52:41] 2025-06-06 03:52:05,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:52:41] 2025-06-06 03:52:05,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:52:41] 2025-06-06 03:52:05,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:52:41] 2025-06-06 03:52:05,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:52:41] 2025-06-06 03:52:05,804 | INFO     | aborting loop
[2025-06-06 05:52:41] 2025-06-06 03:52:05,918 | INFO     | all payload control threads have been joined
[2025-06-06 05:52:41] 2025-06-06 03:52:06,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:52:41] 2025-06-06 03:52:06,242 | INFO     | all data control threads have been joined
[2025-06-06 05:52:41] 2025-06-06 03:52:06,608 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:06,613 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:06,663 | INFO     | all job control threads have been joined
[2025-06-06 05:52:41] 2025-06-06 03:52:06,669 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:06,787 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:06,809 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:06,924 | INFO     | [payload] control thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:07,209 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:07,248 | INFO     | [data] control thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:07,668 | INFO     | [job] control thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:07,676 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:07,718 | INFO     | [job] validate thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:07,959 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:08,059 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:08,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:52:41] 2025-06-06 03:52:08,183 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:12,152 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:16,061 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:52:41] 2025-06-06 03:52:17,066 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:52:41] 2025-06-06 03:52:17,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22753810696000)>', '<ExcThread(monitor, started 22753568581376)>']
[2025-06-06 05:52:41] 2025-06-06 03:52:18,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:52:41] 2025-06-06 03:52:18,665 | INFO     | [monitor] control thread has ended
[2025-06-06 05:52:41] 2025-06-06 03:52:22,864 | INFO     | all workflow threads have been joined
[2025-06-06 05:52:41] 2025-06-06 03:52:22,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:52:41] 2025-06-06 03:52:22,864 | INFO     | traces error code: 0
[2025-06-06 05:52:41] 2025-06-06 03:52:22,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:52:41] 2025-06-06 03:52:22,976 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:52:41] 2025-06-06 03:52:22,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:52:41] 2025-06-06 03:52:22,980 [wrapper] pilotpid: 705154
[2025-06-06 05:52:41] 2025-06-06 03:52:22,983 [wrapper] Pilot exit status: 0
[2025-06-06 05:52:41] 2025-06-06 03:52:22,992 [wrapper] pandaids: 6671578043
[2025-06-06 05:52:41] 2025-06-06 03:52:23,039 [wrapper] cleanup supervisor_pilot  961975 705155
[2025-06-06 05:52:41] 2025-06-06 03:52:23,041 [wrapper] Test setup, not cleaning
[2025-06-06 05:52:41] 2025-06-06 03:52:23,044 [wrapper] apfmon messages muted
[2025-06-06 05:52:41] 2025-06-06 03:52:23,047 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:52:41] 2025-06-06 03:52:23,049 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:52:41]  *** Error codes and diagnostics ***
[2025-06-06 05:52:41]     "exeErrorCode": 0,
[2025-06-06 05:52:41]     "exeErrorDiag": "",
[2025-06-06 05:52:41]     "pilotErrorCode": 0,
[2025-06-06 05:52:41]     "pilotErrorDiag": "",
[2025-06-06 05:52:41]  *** Listing of results directory ***
[2025-06-06 05:52:41] total 420316
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc    495897 May 29 14:27 pilot3.tar.gz
[2025-06-06 05:52:41] -rwx------ 1 boinc boinc     37140 May 29 14:57 runpilot2-wrapper.sh
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc      5111 May 29 14:57 queuedata.json
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc       100 Jun  6 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:52:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 01:20 run_atlas
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc       105 Jun  6 01:20 job.xml
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc      6420 Jun  6 01:20 init_data.xml
[2025-06-06 05:52:41] -rw-r--r-- 2 boinc boinc 224668063 Jun  6 01:20 EVNT.44871834._003046.pool.root.1
[2025-06-06 05:52:41] drwxrwx--x 2 boinc boinc      4096 Jun  6 01:20 shared
[2025-06-06 05:52:41] -rw-r--r-- 2 boinc boinc    508880 Jun  6 01:20 input.tar.gz
[2025-06-06 05:52:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:20 start_atlas.sh
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc         0 Jun  6 01:20 boinc_lockfile
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc      2559 Jun  6 01:20 pandaJob.out
[2025-06-06 05:52:41] -rw------- 1 boinc boinc    987721 Jun  6 01:21 agis_schedconf.cvmfs.json
[2025-06-06 05:52:41] drwx------ 4 boinc boinc      4096 Jun  6 01:21 pilot3
[2025-06-06 05:52:41] -rw------- 1 boinc boinc 198168123 Jun  6 05:51 HITS.44871837._100431.pool.root.1
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc       528 Jun  6 05:51 boinc_task_state.xml
[2025-06-06 05:52:41] -rw------- 1 boinc boinc        95 Jun  6 05:51 pilot_heartbeat.json
[2025-06-06 05:52:41] -rw------- 1 boinc boinc      1035 Jun  6 05:51 memory_monitor_summary.json
[2025-06-06 05:52:41] -rw------- 1 boinc boinc   1598969 Jun  6 05:51 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:52:41] -rw------- 1 boinc boinc    363797 Jun  6 05:51 log.44871837._100431.job.log.tgz.1
[2025-06-06 05:52:41] -rw------- 1 boinc boinc      7730 Jun  6 05:52 heartbeat.json
[2025-06-06 05:52:41] -rw------- 1 boinc boinc      4559 Jun  6 05:52 pilotlog.txt
[2025-06-06 05:52:41] -rw------- 1 boinc boinc   1504568 Jun  6 05:52 log.44871837._100431.job.log.1
[2025-06-06 05:52:41] -rw------- 1 boinc boinc       357 Jun  6 05:52 output.list
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:52 runtime_log
[2025-06-06 05:52:41] -rw------- 1 boinc boinc   1884160 Jun  6 05:52 result.tar.gz
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc      9026 Jun  6 05:52 runtime_log.err
[2025-06-06 05:52:41] -rw------- 1 boinc boinc       664 Jun  6 05:52 GDzKDm4zre7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLEVKDm2InaUm.diag
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc        26 Jun  6 05:52 wrapper_checkpoint.txt
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:52 boinc_mmap_file
[2025-06-06 05:52:41] -rw-r--r-- 1 boinc boinc     20971 Jun  6 05:52 stderr.txt
[2025-06-06 05:52:41] HITS file was successfully produced:
[2025-06-06 05:52:41] -rw------- 1 boinc boinc 198168123 Jun  6 05:51 shared/HITS.pool.root.1
[2025-06-06 05:52:41]  *** Contents of shared directory: ***
[2025-06-06 05:52:41] total 415292
[2025-06-06 05:52:41] -rw-r--r-- 2 boinc boinc 224668063 Jun  6 01:20 ATLAS.root_0
[2025-06-06 05:52:41] -rw-r--r-- 2 boinc boinc    508880 Jun  6 01:20 input.tar.gz
[2025-06-06 05:52:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:20 start_atlas.sh
[2025-06-06 05:52:41] -rw------- 1 boinc boinc 198168123 Jun  6 05:51 HITS.pool.root.1
[2025-06-06 05:52:41] -rw------- 1 boinc boinc   1884160 Jun  6 05:52 result.tar.gz
05:52:43 (701455): run_atlas exited; CPU time 63229.556137
05:52:43 (701455): called boinc_finish(0)

</stderr_txt>
]]>

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