Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:07:58 (22094): wrapper (7.7.26015): starting
12:07:58 (22094): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 12:07:58] Arguments: --nthreads 8
[2025-05-30 12:07:58] Threads: 8
[2025-05-30 12:07:58] Checking for CVMFS
[2025-05-30 12:07:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 12:07:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 12:07:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 12:07:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 12:07:59] 2.11.2.0 26867 25867 92312 146594 0 209 18891206 25165825 4053 130560 0 14183846 99.833 14814019 1765 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 12:07:59] CVMFS is ok
[2025-05-30 12:07:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 12:07:59] Checking for apptainer binary...
[2025-05-30 12:07:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 12:07:59] Running /usr/bin/apptainer --version
[2025-05-30 12:07:59] apptainer version 1.3.2-1.el7
[2025-05-30 12:07:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 12:08:01] cg-vwn435.simple-grid.lan
[2025-05-30 12:08:01] apptainer works
[2025-05-30 12:08:01] Set ATHENA_PROC_NUMBER=8
[2025-05-30 12:08:01] Set ATHENA_CORE_NUMBER=8
[2025-05-30 12:08:01] Starting ATLAS job with PandaID=6668326793
[2025-05-30 12:08:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 17:27:17]  *** The last 200 lines of the pilot log: ***
[2025-05-30 17:27:17] 2025-05-30 15:01:03,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 17:27:17] 2025-05-30 15:01:03,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 17:27:17] 2025-05-30 15:01:03,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 17:27:17] 2025-05-30 15:01:03,259 | INFO     | fitting pss+swap vs Time
[2025-05-30 17:27:17] 2025-05-30 15:01:03,260 | INFO     | sum of square deviations: 7178069470.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,263 | INFO     | sum of deviations: 27157445525.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,263 | INFO     | mean x: 1748608446.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,263 | INFO     | mean y: 2493669.1122807018
[2025-05-30 17:27:17] 2025-05-30 15:01:03,263 | INFO     | -- intersect: -6613176298.316985
[2025-05-30 17:27:17] 2025-05-30 15:01:03,263 | INFO     | intersect: -6613176298.316985
[2025-05-30 17:27:17] 2025-05-30 15:01:03,264 | INFO     | chi2: 2.4528444472997033
[2025-05-30 17:27:17] 2025-05-30 15:01:03,264 | INFO     | sum of square deviations: 6806862510.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,267 | INFO     | sum of deviations: 45695239964.50001
[2025-05-30 17:27:17] 2025-05-30 15:01:03,267 | INFO     | mean x: 1748608293.5
[2025-05-30 17:27:17] 2025-05-30 15:01:03,267 | INFO     | mean y: 2501174.2535714284
[2025-05-30 17:27:17] 2025-05-30 15:01:03,276 | INFO     | -- intersect: -11736104601.610317
[2025-05-30 17:27:17] 2025-05-30 15:01:03,277 | INFO     | intersect: -11736104601.610317
[2025-05-30 17:27:17] 2025-05-30 15:01:03,277 | INFO     | chi2: 1.6819970236710386
[2025-05-30 17:27:17] 2025-05-30 15:01:03,277 | INFO     | current chi2=1.6819970236710386 (change=31.42667381444747 %)
[2025-05-30 17:27:17] 2025-05-30 15:01:03,278 | INFO     | sum of square deviations: 6448679050.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,280 | INFO     | sum of deviations: 44991765608.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,280 | INFO     | mean x: 1748608141.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,281 | INFO     | mean y: 2500874.7236363636
[2025-05-30 17:27:17] 2025-05-30 15:01:03,281 | INFO     | -- intersect: -12197356958.193727
[2025-05-30 17:27:17] 2025-05-30 15:01:03,281 | INFO     | intersect: -12197356958.193727
[2025-05-30 17:27:17] 2025-05-30 15:01:03,281 | INFO     | chi2: 1.6824611404183385
[2025-05-30 17:27:17] 2025-05-30 15:01:03,281 | INFO     | current chi2=1.6824611404183385 (change=-0.02759319670417077 %)
[2025-05-30 17:27:17] 2025-05-30 15:01:03,281 | INFO     | right removable region: 274
[2025-05-30 17:27:17] 2025-05-30 15:01:03,282 | INFO     | sum of square deviations: 6806862510.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,284 | INFO     | sum of deviations: -24404330115.499992
[2025-05-30 17:27:17] 2025-05-30 15:01:03,285 | INFO     | mean x: 1748608598.5
[2025-05-30 17:27:17] 2025-05-30 15:01:03,285 | INFO     | mean y: 2514739.5464285715
[2025-05-30 17:27:17] 2025-05-30 15:01:03,285 | INFO     | -- intersect: 6271720473.892279
[2025-05-30 17:27:17] 2025-05-30 15:01:03,285 | INFO     | intersect: 6271720473.892279
[2025-05-30 17:27:17] 2025-05-30 15:01:03,286 | INFO     | chi2: 0.8811273059309616
[2025-05-30 17:27:17] 2025-05-30 15:01:03,286 | INFO     | current chi2=0.8811273059309616 (change=64.07732635059756 %)
[2025-05-30 17:27:17] 2025-05-30 15:01:03,286 | INFO     | sum of square deviations: 6448679050.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,288 | INFO     | sum of deviations: -35828616082.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,289 | INFO     | mean x: 1748608751.0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,289 | INFO     | mean y: 2519589.189090909
[2025-05-30 17:27:17] 2025-05-30 15:01:03,289 | INFO     | -- intersect: 9717723452.09564
[2025-05-30 17:27:17] 2025-05-30 15:01:03,289 | INFO     | intersect: 9717723452.09564
[2025-05-30 17:27:17] 2025-05-30 15:01:03,290 | INFO     | chi2: 0.8048604763205637
[2025-05-30 17:27:17] 2025-05-30 15:01:03,290 | INFO     | current chi2=0.8048604763205637 (change=8.655597108049852 %)
[2025-05-30 17:27:17] 2025-05-30 15:01:03,290 | INFO     | left removable region: 20
[2025-05-30 17:27:17] 2025-05-30 15:01:03,290 | INFO     | sum of square deviations: 5081276667.5
[2025-05-30 17:27:17] 2025-05-30 15:01:03,292 | INFO     | sum of deviations: -17137108047.500002
[2025-05-30 17:27:17] 2025-05-30 15:01:03,292 | INFO     | mean x: 1748608720.5
[2025-05-30 17:27:17] 2025-05-30 15:01:03,293 | INFO     | mean y: 2528458.8307086616
[2025-05-30 17:27:17] 2025-05-30 15:01:03,293 | INFO     | -- intersect: 5899884288.25706
[2025-05-30 17:27:17] 2025-05-30 15:01:03,293 | INFO     | intersect: 5899884288.25706
[2025-05-30 17:27:17] 2025-05-30 15:01:03,293 | INFO     | chi2: 0.016185661084176697
[2025-05-30 17:27:17] 2025-05-30 15:01:03,293 | INFO     | -- intersect: 5899884288.25706
[2025-05-30 17:27:17] 2025-05-30 15:01:03,293 | INFO     | current memory leak: -3.37 B/s (using 254 data points, chi2=0.02)
[2025-05-30 17:27:17] 2025-05-30 15:01:03,294 | INFO     | ..............................
[2025-05-30 17:27:17] 2025-05-30 15:01:03,294 | INFO     | . Timing measurements:
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . get job = 0 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . initial setup = 2 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . payload setup = 18 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . stage-in = 0 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . payload execution = 17415 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . stage-out = 3 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | . log creation = 1 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,295 | INFO     | ..............................
[2025-05-30 17:27:17] 2025-05-30 15:01:03,527 | INFO     | 
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | job summary report
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | --------------------------------------------------
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | PanDA job id: 6668326793
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | task id: 44871837
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | errors: (none)
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | pilot state: finished 
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | transexitcode: 0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | exeerrorcode: 0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,528 | INFO     | exeerrordiag: 
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | exitcode: 0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | exitmsg: OK
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | cpuconsumptiontime: 66281 s
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | nevents: 400
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | neventsw: 0
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | pid: 32665
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | pgrp: 32665
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | corecount: 8
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | event service: False
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | sizes: {0: 2405232, 1: 2405232, 8: 2405466, 12: 2405494, 17438: 2436588, 17442: 2445529, 17444: 2445713, 17538: 2445883}
[2025-05-30 17:27:17] 2025-05-30 15:01:03,529 | INFO     | --------------------------------------------------
[2025-05-30 17:27:17] 2025-05-30 15:01:03,530 | INFO     | 
[2025-05-30 17:27:17] 2025-05-30 15:01:03,530 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-30 17:27:17] 2025-05-30 15:01:04,110 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 17:27:17] 2025-05-30 15:01:04,113 | INFO     | job 6668326793 has completed (purged errors)
[2025-05-30 17:27:17] 2025-05-30 15:01:04,113 | INFO     | overall cleanup function is called
[2025-05-30 17:27:17] 2025-05-30 15:01:05,129 | INFO     | --- collectZombieJob: --- 10, [32665]
[2025-05-30 17:27:17] 2025-05-30 15:01:05,130 | INFO     | zombie collector waiting for pid 32665
[2025-05-30 17:27:17] 2025-05-30 15:01:05,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 17:27:17] 2025-05-30 15:01:05,130 | INFO     | collected zombie processes
[2025-05-30 17:27:17] 2025-05-30 15:01:05,130 | INFO     | will attempt to kill all subprocesses of pid=32665
[2025-05-30 17:27:17] 2025-05-30 15:01:05,271 | INFO     | process IDs to be killed: [32665] (in reverse order)
[2025-05-30 17:27:17] 2025-05-30 15:01:06,252 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 17:27:17] 2025-05-30 15:01:06,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 17:27:17] 2025-05-30 15:01:06,256 | INFO     | did not find any defunct processes belonging to 32665
[2025-05-30 17:27:17] 2025-05-30 15:01:06,265 | INFO     | did not find any defunct processes belonging to 32665
[2025-05-30 17:27:17] 2025-05-30 15:01:06,265 | INFO     | ready for new job
[2025-05-30 17:27:17] 2025-05-30 15:01:06,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 17:27:17] 2025-05-30 15:01:06,267 | INFO     | **************************************
[2025-05-30 17:27:17] 2025-05-30 15:01:06,268 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 17:27:17] 2025-05-30 15:01:06,268 | INFO     | **************************************
[2025-05-30 17:27:17] 2025-05-30 15:01:06,268 | INFO     | 
[2025-05-30 17:27:17] 2025-05-30 15:01:06,268 | INFO     | pilot is running in a VM
[2025-05-30 17:27:17] 2025-05-30 15:01:06,269 | INFO     | architecture information:
[2025-05-30 17:27:17] 2025-05-30 15:01:06,280 | INFO     | executing command: cat /etc/os-release
[2025-05-30 17:27:17] 2025-05-30 15:01:06,577 | INFO     | cat /etc/os-release:
[2025-05-30 17:27:17] NAME="CentOS Linux"
[2025-05-30 17:27:17] VERSION="7 (Core)"
[2025-05-30 17:27:17] ID="centos"
[2025-05-30 17:27:17] ID_LIKE="rhel fedora"
[2025-05-30 17:27:17] VERSION_ID="7"
[2025-05-30 17:27:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 17:27:17] ANSI_COLOR="0;31"
[2025-05-30 17:27:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 17:27:17] HOME_URL="https://www.centos.org/"
[2025-05-30 17:27:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 17:27:17] 
[2025-05-30 17:27:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 17:27:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 17:27:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 17:27:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 17:27:17] 
[2025-05-30 17:27:17] 2025-05-30 15:01:06,577 | INFO     | **************************************
[2025-05-30 17:27:17] 2025-05-30 15:01:07,080 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-30 17:27:17] 2025-05-30 15:01:07,352 | INFO     | sufficient remaining disk space (496682139648 B)
[2025-05-30 17:27:17] 2025-05-30 15:01:07,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 17:27:17] 2025-05-30 15:01:07,353 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 17:27:17] 2025-05-30 15:01:07,353 | INFO     | update_server=False
[2025-05-30 17:27:17] 2025-05-30 15:01:07,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 17:27:17] 2025-05-30 15:01:07,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 17:27:17] 2025-05-30 15:01:07,355 | INFO     | aborting loop
[2025-05-30 17:27:17] 2025-05-30 15:01:07,816 | INFO     | all data control threads have been joined
[2025-05-30 17:27:17] 2025-05-30 15:01:08,073 | INFO     | all payload control threads have been joined
[2025-05-30 17:27:17] 2025-05-30 15:01:08,238 | INFO     | PID=25785 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-30 17:27:17] 2025-05-30 15:01:08,238 | INFO     | .. there are 9 such processes running
[2025-05-30 17:27:17] 2025-05-30 15:01:08,239 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 17:27:17] 2025-05-30 15:01:08,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 17:27:17] 2025-05-30 15:01:08,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 17:27:17] 2025-05-30 15:01:08,358 | INFO     | [job] retrieve thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:08,360 | INFO     | [job] job monitor thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:08,391 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:08,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 17:27:17] 2025-05-30 15:01:08,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 17:27:17] 2025-05-30 15:01:08,622 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:08,822 | INFO     | [data] control thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:08,823 | INFO     | all job control threads have been joined
[2025-05-30 17:27:17] 2025-05-30 15:01:08,868 | INFO     | [job] validate thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,079 | INFO     | [payload] control thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,128 | INFO     | [payload] validate_post thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,321 | INFO     | [data] copytool_in thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,508 | INFO     | [job] queue monitor thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,673 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,719 | INFO     | [payload] failed_post thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:09,829 | INFO     | [job] control thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:10,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 17:27:17] 2025-05-30 15:01:10,607 | INFO     | [data] copytool_out thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:14,138 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:18,235 | INFO     | job.realtimelogging is not enabled
[2025-05-30 17:27:17] 2025-05-30 15:01:19,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 17:27:17] 2025-05-30 15:01:20,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966985467712)>', '<ExcThread(monitor, started 139966365542144)>']
[2025-05-30 17:27:17] 2025-05-30 15:01:20,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 17:27:17] 2025-05-30 15:01:20,310 | INFO     | [monitor] control thread has ended
[2025-05-30 17:27:17] 2025-05-30 15:01:25,038 | INFO     | all workflow threads have been joined
[2025-05-30 17:27:17] 2025-05-30 15:01:25,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 17:27:17] 2025-05-30 15:01:25,039 | INFO     | traces error code: 0
[2025-05-30 17:27:17] 2025-05-30 15:01:25,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 17:27:17] 2025-05-30 15:01:25,422 [wrapper] ==== pilot stdout END ====
[2025-05-30 17:27:17] 2025-05-30 15:01:25,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 17:27:17] 2025-05-30 15:01:25,570 [wrapper] pilotpid: 25785
[2025-05-30 17:27:17] 2025-05-30 15:01:25,669 [wrapper] Pilot exit status: 0
[2025-05-30 17:27:17] 2025-05-30 15:01:26,192 [wrapper] pandaids: 6668326793
[2025-05-30 17:27:17] 2025-05-30 15:01:26,752 [wrapper] cleanup supervisor_pilot  5854 25786
[2025-05-30 17:27:17] 2025-05-30 15:01:26,781 [wrapper] Test setup, not cleaning
[2025-05-30 17:27:17] 2025-05-30 15:01:26,807 [wrapper] apfmon messages muted
[2025-05-30 17:27:17] 2025-05-30 15:01:26,832 [wrapper] ==== wrapper stdout END ====
[2025-05-30 17:27:17] 2025-05-30 15:01:26,860 [wrapper] ==== wrapper stderr END ====
[2025-05-30 17:27:17]  *** Error codes and diagnostics ***
[2025-05-30 17:27:17]     "exeErrorCode": 0,
[2025-05-30 17:27:17]     "exeErrorDiag": "",
[2025-05-30 17:27:17]     "pilotErrorCode": 0,
[2025-05-30 17:27:17]     "pilotErrorDiag": "",
[2025-05-30 17:27:17]  *** Listing of results directory ***
[2025-05-30 17:27:17] total 412388
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc      5111 May 28 12:53 queuedata.json
[2025-05-30 17:27:17] -rwx------. 1 boinc boinc     37140 May 28 12:54 runpilot2-wrapper.sh
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc    495897 May 28 12:54 pilot3.tar.gz
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc       100 May 30 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 17:27:17] -rwxr-xr-x. 1 boinc boinc      7986 May 30 12:07 run_atlas
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc       105 May 30 12:07 job.xml
[2025-05-30 17:27:17] -rw-r--r--. 2 boinc boinc 223148114 May 30 12:07 EVNT.44871834._003244.pool.root.1
[2025-05-30 17:27:17] -rw-r--r--. 2 boinc boinc     15093 May 30 12:07 start_atlas.sh
[2025-05-30 17:27:17] drwxrwx--x. 2 boinc boinc        68 May 30 12:07 shared
[2025-05-30 17:27:17] -rw-r--r--. 2 boinc boinc    508872 May 30 12:07 input.tar.gz
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc      6371 May 30 12:07 init_data.xml
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc         0 May 30 12:07 boinc_lockfile
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc      2558 May 30 12:08 pandaJob.out
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc    992145 May 30 12:08 agis_schedconf.cvmfs.json
[2025-05-30 17:27:17] drwx------. 4 boinc boinc      4096 May 30 12:08 pilot3
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc 191468472 May 30 16:57 HITS.44871837._083102.pool.root.1
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc       531 May 30 16:58 boinc_task_state.xml
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc      1017 May 30 16:59 memory_monitor_summary.json
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc   1603667 May 30 16:59 agis_ddmendpoints.agis.ALL.json
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc    401677 May 30 16:59 log.44871837._083102.job.log.tgz.1
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc        95 May 30 17:00 pilot_heartbeat.json
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc      7684 May 30 17:01 heartbeat.json
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc      4880 May 30 17:01 pilotlog.txt
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc   1512501 May 30 17:01 log.44871837._083102.job.log.1
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc       357 May 30 17:01 output.list
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc       620 May 30 17:01 runtime_log
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc   1935360 May 30 17:01 result.tar.gz
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc       657 May 30 17:01 Uo3KDmHbTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFybKDmHqpKEo.diag
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc      8659 May 30 17:01 runtime_log.err
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc      8192 May 30 17:27 boinc_mmap_file
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc        28 May 30 17:27 wrapper_checkpoint.txt
[2025-05-30 17:27:17] -rw-r--r--. 1 boinc boinc     20530 May 30 17:27 stderr.txt
[2025-05-30 17:27:17] HITS file was successfully produced:
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc 191468472 May 30 16:57 shared/HITS.pool.root.1
[2025-05-30 17:27:17]  *** Contents of shared directory: ***
[2025-05-30 17:27:17] total 407312
[2025-05-30 17:27:17] -rw-r--r--. 2 boinc boinc 223148114 May 30 12:07 ATLAS.root_0
[2025-05-30 17:27:17] -rw-r--r--. 2 boinc boinc     15093 May 30 12:07 start_atlas.sh
[2025-05-30 17:27:17] -rw-r--r--. 2 boinc boinc    508872 May 30 12:07 input.tar.gz
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc 191468472 May 30 16:57 HITS.pool.root.1
[2025-05-30 17:27:17] -rw-------. 1 boinc boinc   1935360 May 30 17:01 result.tar.gz
17:27:19 (22094): run_atlas exited; CPU time 66508.456856
17:27:19 (22094): called boinc_finish(0)

</stderr_txt>
]]>

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