Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
10:50:49 (634042): wrapper (7.7.26015): starting
10:50:49 (634042): wrapper: running run_atlas (--nthreads 2)
[2025-06-01 10:50:49] Arguments: --nthreads 2
[2025-06-01 10:50:49] Threads: 2
[2025-06-01 10:50:49] Checking for CVMFS
[2025-06-01 10:50:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-01 10:50:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-01 10:50:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-01 10:50:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-01 10:50:50] 2.12.7.0 8135 5395 59416 146663 0 56 8257557 10240001 0 130560 0 1598882 99.980 1194374 1509 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-01 10:50:50] CVMFS is ok
[2025-06-01 10:50:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 10:50:50] Checking for apptainer binary...
[2025-06-01 10:50:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-01 10:50:50] Running /usr/bin/apptainer --version
[2025-06-01 10:50:50] apptainer version 1.4.1-1.el9
[2025-06-01 10:50:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 10:50:50] ahanllin02
[2025-06-01 10:50:50] apptainer works
[2025-06-01 10:50:50] Set ATHENA_PROC_NUMBER=2
[2025-06-01 10:50:50] Set ATHENA_CORE_NUMBER=2
[2025-06-01 10:50:50] Starting ATLAS job with PandaID=6672483052
[2025-06-01 10:50:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 18:55:07]  *** The last 200 lines of the pilot log: ***
[2025-06-01 18:55:07] 2025-06-01 16:54:51,493 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-01 18:55:07] 2025-06-01 16:54:51,493 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6672483052/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,494 | INFO     | extracted standard info from prmon json
[2025-06-01 18:55:07] 2025-06-01 16:54:51,494 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 18:55:07] 2025-06-01 16:54:51,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 18:55:07] 2025-06-01 16:54:51,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 18:55:07] 2025-06-01 16:54:51,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 18:55:07] 2025-06-01 16:54:51,500 | INFO     | fitting pss+swap vs Time
[2025-06-01 18:55:07] 2025-06-01 16:54:51,501 | INFO     | sum of square deviations: 33442374650.9979
[2025-06-01 18:55:07] 2025-06-01 16:54:51,505 | INFO     | sum of deviations: -80116741801.18906
[2025-06-01 18:55:07] 2025-06-01 16:54:51,506 | INFO     | mean x: 1748782367.502101
[2025-06-01 18:55:07] 2025-06-01 16:54:51,506 | INFO     | mean y: 2291810.18907563
[2025-06-01 18:55:07] 2025-06-01 16:54:51,506 | INFO     | -- intersect: 4191789322.425613
[2025-06-01 18:55:07] 2025-06-01 16:54:51,506 | INFO     | intersect: 4191789322.425613
[2025-06-01 18:55:07] 2025-06-01 16:54:51,506 | INFO     | chi2: 2.1774369609735778
[2025-06-01 18:55:07] 2025-06-01 16:54:51,507 | INFO     | sum of square deviations: 32399546100.997887
[2025-06-01 18:55:07] 2025-06-01 16:54:51,511 | INFO     | sum of deviations: -52973469780.54567
[2025-06-01 18:55:07] 2025-06-01 16:54:51,511 | INFO     | mean x: 1748782215.002123
[2025-06-01 18:55:07] 2025-06-01 16:54:51,511 | INFO     | mean y: 2295746.5456475583
[2025-06-01 18:55:07] 2025-06-01 16:54:51,511 | INFO     | -- intersect: 2861566105.778164
[2025-06-01 18:55:07] 2025-06-01 16:54:51,511 | INFO     | intersect: 2861566105.778164
[2025-06-01 18:55:07] 2025-06-01 16:54:51,512 | INFO     | chi2: 1.5291762490831209
[2025-06-01 18:55:07] 2025-06-01 16:54:51,512 | INFO     | current chi2=1.5291762490831209 (change=29.771732707274605 %)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,512 | INFO     | sum of square deviations: 31378624938.497925
[2025-06-01 18:55:07] 2025-06-01 16:54:51,517 | INFO     | sum of deviations: -52732701139.012886
[2025-06-01 18:55:07] 2025-06-01 16:54:51,517 | INFO     | mean x: 1748782062.502146
[2025-06-01 18:55:07] 2025-06-01 16:54:51,517 | INFO     | mean y: 2295782.5128755365
[2025-06-01 18:55:07] 2025-06-01 16:54:51,517 | INFO     | -- intersect: 2941175419.206307
[2025-06-01 18:55:07] 2025-06-01 16:54:51,517 | INFO     | intersect: 2941175419.206307
[2025-06-01 18:55:07] 2025-06-01 16:54:51,517 | INFO     | chi2: 1.5282446127398284
[2025-06-01 18:55:07] 2025-06-01 16:54:51,518 | INFO     | current chi2=1.5282446127398284 (change=0.06092406574135055 %)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,518 | INFO     | right removable region: 465
[2025-06-01 18:55:07] 2025-06-01 16:54:51,518 | INFO     | sum of square deviations: 32399545490.997883
[2025-06-01 18:55:07] 2025-06-01 16:54:51,522 | INFO     | sum of deviations: -110296227823.16359
[2025-06-01 18:55:07] 2025-06-01 16:54:51,522 | INFO     | mean x: 1748782520.002123
[2025-06-01 18:55:07] 2025-06-01 16:54:51,522 | INFO     | mean y: 2296171.163481953
[2025-06-01 18:55:07] 2025-06-01 16:54:51,523 | INFO     | -- intersect: 5955593117.65653
[2025-06-01 18:55:07] 2025-06-01 16:54:51,523 | INFO     | intersect: 5955593117.65653
[2025-06-01 18:55:07] 2025-06-01 16:54:51,523 | INFO     | chi2: 1.114503894083143
[2025-06-01 18:55:07] 2025-06-01 16:54:51,523 | INFO     | current chi2=1.114503894083143 (change=48.81579058046185 %)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,524 | INFO     | sum of square deviations: 31378623718.497925
[2025-06-01 18:55:07] 2025-06-01 16:54:51,528 | INFO     | sum of deviations: -84822148338.51495
[2025-06-01 18:55:07] 2025-06-01 16:54:51,528 | INFO     | mean x: 1748782672.502146
[2025-06-01 18:55:07] 2025-06-01 16:54:51,528 | INFO     | mean y: 2292364.515021459
[2025-06-01 18:55:07] 2025-06-01 16:54:51,528 | INFO     | -- intersect: 4729571183.036204
[2025-06-01 18:55:07] 2025-06-01 16:54:51,528 | INFO     | intersect: 4729571183.036204
[2025-06-01 18:55:07] 2025-06-01 16:54:51,528 | INFO     | chi2: 1.0243292930616106
[2025-06-01 18:55:07] 2025-06-01 16:54:51,529 | INFO     | current chi2=1.0243292930616106 (change=8.091008160695166 %)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,529 | INFO     | left removable region: 20
[2025-06-01 18:55:07] 2025-06-01 16:54:51,529 | INFO     | sum of square deviations: 27324733816.997738
[2025-06-01 18:55:07] 2025-06-01 16:54:51,533 | INFO     | sum of deviations: -5714169105.806732
[2025-06-01 18:55:07] 2025-06-01 16:54:51,533 | INFO     | mean x: 1748782642.002247
[2025-06-01 18:55:07] 2025-06-01 16:54:51,533 | INFO     | mean y: 2287998.806741573
[2025-06-01 18:55:07] 2025-06-01 16:54:51,533 | INFO     | -- intersect: 367994754.18176115
[2025-06-01 18:55:07] 2025-06-01 16:54:51,533 | INFO     | intersect: 367994754.18176115
[2025-06-01 18:55:07] 2025-06-01 16:54:51,534 | INFO     | chi2: 0.12455197295550782
[2025-06-01 18:55:07] 2025-06-01 16:54:51,534 | INFO     | -- intersect: 367994754.18176115
[2025-06-01 18:55:07] 2025-06-01 16:54:51,534 | INFO     | current memory leak: -0.21 B/s (using 445 data points, chi2=0.12)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,534 | INFO     | ..............................
[2025-06-01 18:55:07] 2025-06-01 16:54:51,534 | INFO     | . Timing measurements:
[2025-06-01 18:55:07] 2025-06-01 16:54:51,534 | INFO     | . get job = 0 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | . initial setup = 1 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | . payload setup = 4 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | . stage-in = 0 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | . payload execution = 28994 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | . stage-out = 5 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | . log creation = 0 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,535 | INFO     | ..............................
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | 
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | job summary report
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | --------------------------------------------------
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | PanDA job id: 6672483052
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | task id: 44871837
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | errors: (none)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | pilot state: finished 
[2025-06-01 18:55:07] 2025-06-01 16:54:51,606 | INFO     | transexitcode: 0
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | exeerrorcode: 0
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | exeerrordiag: 
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | exitcode: 0
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | exitmsg: OK
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | cpuconsumptiontime: 57469 s
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | nevents: 400
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | neventsw: 0
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | pid: 644046
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | pgrp: 644046
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | corecount: 2
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | event service: False
[2025-06-01 18:55:07] 2025-06-01 16:54:51,607 | INFO     | sizes: {0: 2405013, 1: 2405212, 3: 2405418, 11: 2405446, 29003: 2442834, 29009: 2451775, 29010: 2451959, 29020: 2452129}
[2025-06-01 18:55:07] 2025-06-01 16:54:51,608 | INFO     | --------------------------------------------------
[2025-06-01 18:55:07] 2025-06-01 16:54:51,608 | INFO     | 
[2025-06-01 18:55:07] 2025-06-01 16:54:51,608 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-01 18:55:07] 2025-06-01 16:54:51,619 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 18:55:07] 2025-06-01 16:54:51,621 | INFO     | job 6672483052 has completed (purged errors)
[2025-06-01 18:55:07] 2025-06-01 16:54:51,622 | INFO     | overall cleanup function is called
[2025-06-01 18:55:07] 2025-06-01 16:54:52,628 | INFO     | --- collectZombieJob: --- 10, [644046]
[2025-06-01 18:55:07] 2025-06-01 16:54:52,628 | INFO     | zombie collector waiting for pid 644046
[2025-06-01 18:55:07] 2025-06-01 16:54:52,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 18:55:07] 2025-06-01 16:54:52,629 | INFO     | collected zombie processes
[2025-06-01 18:55:07] 2025-06-01 16:54:52,629 | INFO     | will attempt to kill all subprocesses of pid=644046
[2025-06-01 18:55:07] 2025-06-01 16:54:52,683 | INFO     | process IDs to be killed: [644046] (in reverse order)
[2025-06-01 18:55:07] 2025-06-01 16:54:52,706 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 18:55:07] 2025-06-01 16:54:52,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 18:55:07] 2025-06-01 16:54:52,709 | INFO     | did not find any defunct processes belonging to 644046
[2025-06-01 18:55:07] 2025-06-01 16:54:52,710 | INFO     | did not find any defunct processes belonging to 644046
[2025-06-01 18:55:07] 2025-06-01 16:54:52,711 | INFO     | ready for new job
[2025-06-01 18:55:07] 2025-06-01 16:54:52,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 18:55:07] 2025-06-01 16:54:52,712 | INFO     | **************************************
[2025-06-01 18:55:07] 2025-06-01 16:54:52,712 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 18:55:07] 2025-06-01 16:54:52,712 | INFO     | **************************************
[2025-06-01 18:55:07] 2025-06-01 16:54:52,713 | INFO     | 
[2025-06-01 18:55:07] 2025-06-01 16:54:52,713 | INFO     | architecture information:
[2025-06-01 18:55:07] 2025-06-01 16:54:52,713 | INFO     | executing command: cat /etc/os-release
[2025-06-01 18:55:07] 2025-06-01 16:54:52,722 | INFO     | cat /etc/os-release:
[2025-06-01 18:55:07] NAME="CentOS Linux"
[2025-06-01 18:55:07] VERSION="7 (Core)"
[2025-06-01 18:55:07] ID="centos"
[2025-06-01 18:55:07] ID_LIKE="rhel fedora"
[2025-06-01 18:55:07] VERSION_ID="7"
[2025-06-01 18:55:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 18:55:07] ANSI_COLOR="0;31"
[2025-06-01 18:55:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 18:55:07] HOME_URL="https://www.centos.org/"
[2025-06-01 18:55:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 18:55:07] 
[2025-06-01 18:55:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 18:55:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 18:55:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 18:55:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 18:55:07] 
[2025-06-01 18:55:07] 2025-06-01 16:54:52,722 | INFO     | **************************************
[2025-06-01 18:55:07] 2025-06-01 16:54:53,225 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-01 18:55:07] 2025-06-01 16:54:53,235 | INFO     | sufficient remaining disk space (459539480576 B)
[2025-06-01 18:55:07] 2025-06-01 16:54:53,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 18:55:07] 2025-06-01 16:54:53,236 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 18:55:07] 2025-06-01 16:54:53,236 | INFO     | update_server=False
[2025-06-01 18:55:07] 2025-06-01 16:54:53,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 18:55:07] 2025-06-01 16:54:53,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 18:55:07] 2025-06-01 16:54:53,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 18:55:07] 2025-06-01 16:54:53,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 18:55:07] 2025-06-01 16:54:53,237 | INFO     | aborting loop
[2025-06-01 18:55:07] 2025-06-01 16:54:53,282 | INFO     | all data control threads have been joined
[2025-06-01 18:55:07] 2025-06-01 16:54:53,323 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 18:55:07] 2025-06-01 16:54:53,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 18:55:07] 2025-06-01 16:54:53,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 18:55:07] 2025-06-01 16:54:53,357 | INFO     | all job control threads have been joined
[2025-06-01 18:55:07] 2025-06-01 16:54:54,185 | INFO     | all payload control threads have been joined
[2025-06-01 18:55:07] 2025-06-01 16:54:54,242 | INFO     | [job] retrieve thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,242 | INFO     | [job] queue monitor thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,242 | INFO     | [job] job monitor thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,288 | INFO     | [data] control thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,363 | INFO     | [job] control thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,392 | INFO     | [payload] validate_post thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,559 | INFO     | [payload] failed_post thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:54,628 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,096 | INFO     | [job] validate thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,157 | INFO     | [data] copytool_in thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,191 | INFO     | [payload] control thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,242 | INFO     | [data] copytool_out thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,398 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:55,461 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:54:56,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 18:55:07] 2025-06-01 16:55:00,187 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 18:55:07] 2025-06-01 16:55:02,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549759518528)>', '<ExcThread(monitor, started 140549038270208)>']
[2025-06-01 18:55:07] 2025-06-01 16:55:02,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 18:55:07] 2025-06-01 16:55:02,370 | INFO     | [monitor] control thread has ended
[2025-06-01 18:55:07] 2025-06-01 16:55:07,052 | INFO     | all workflow threads have been joined
[2025-06-01 18:55:07] 2025-06-01 16:55:07,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 18:55:07] 2025-06-01 16:55:07,053 | INFO     | traces error code: 0
[2025-06-01 18:55:07] 2025-06-01 16:55:07,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 18:55:07] 2025-06-01 16:55:07,139 [wrapper] ==== pilot stdout END ====
[2025-06-01 18:55:07] 2025-06-01 16:55:07,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 18:55:07] 2025-06-01 16:55:07,143 [wrapper] pilotpid: 637630
[2025-06-01 18:55:07] 2025-06-01 16:55:07,145 [wrapper] Pilot exit status: 0
[2025-06-01 18:55:07] 2025-06-01 16:55:07,153 [wrapper] pandaids: 6672483052
[2025-06-01 18:55:07] 2025-06-01 16:55:07,170 [wrapper] cleanup supervisor_pilot  686915 637631
[2025-06-01 18:55:07] 2025-06-01 16:55:07,172 [wrapper] Test setup, not cleaning
[2025-06-01 18:55:07] 2025-06-01 16:55:07,174 [wrapper] apfmon messages muted
[2025-06-01 18:55:07] 2025-06-01 16:55:07,176 [wrapper] ==== wrapper stdout END ====
[2025-06-01 18:55:07] 2025-06-01 16:55:07,178 [wrapper] ==== wrapper stderr END ====
[2025-06-01 18:55:07]  *** Error codes and diagnostics ***
[2025-06-01 18:55:07]     "exeErrorCode": 0,
[2025-06-01 18:55:07]     "exeErrorDiag": "",
[2025-06-01 18:55:07]     "pilotErrorCode": 0,
[2025-06-01 18:55:07]     "pilotErrorDiag": "",
[2025-06-01 18:55:07]  *** Listing of results directory ***
[2025-06-01 18:55:07] total 419252
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc    495897 May 29 15:24 pilot3.tar.gz
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc      5111 May 29 15:46 queuedata.json
[2025-06-01 18:55:07] -rwx------ 1 boinc boinc     37140 May 29 15:47 runpilot2-wrapper.sh
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc       100 Jun  1 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 18:55:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  1 10:50 run_atlas
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc       105 Jun  1 10:50 job.xml
[2025-06-01 18:55:07] -rw-r--r-- 2 boinc boinc 224444273 Jun  1 10:50 EVNT.44871834._003515.pool.root.1
[2025-06-01 18:55:07] -rw-r--r-- 2 boinc boinc     15093 Jun  1 10:50 start_atlas.sh
[2025-06-01 18:55:07] drwxrwx--x 2 boinc boinc        68 Jun  1 10:50 shared
[2025-06-01 18:55:07] -rw-r--r-- 2 boinc boinc    508879 Jun  1 10:50 input.tar.gz
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc      6528 Jun  1 10:50 init_data.xml
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc         0 Jun  1 10:50 boinc_lockfile
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc      2559 Jun  1 10:50 pandaJob.out
[2025-06-01 18:55:07] -rw------- 1 boinc boinc    988204 Jun  1 10:50 agis_schedconf.cvmfs.json
[2025-06-01 18:55:07] drwx------ 4 boinc boinc      4096 Jun  1 10:50 pilot3
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc       530 Jun  1 18:54 boinc_task_state.xml
[2025-06-01 18:55:07] -rw------- 1 boinc boinc 195056341 Jun  1 18:54 HITS.44871837._101051.pool.root.1
[2025-06-01 18:55:07] -rw------- 1 boinc boinc      1015 Jun  1 18:54 memory_monitor_summary.json
[2025-06-01 18:55:07] -rw------- 1 boinc boinc   1603667 Jun  1 18:54 agis_ddmendpoints.agis.ALL.json
[2025-06-01 18:55:07] -rw------- 1 boinc boinc    434670 Jun  1 18:54 log.44871837._101051.job.log.tgz.1
[2025-06-01 18:55:07] -rw------- 1 boinc boinc        95 Jun  1 18:54 pilot_heartbeat.json
[2025-06-01 18:55:07] -rw------- 1 boinc boinc      7665 Jun  1 18:54 heartbeat.json
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc        28 Jun  1 18:55 wrapper_checkpoint.txt
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc      8192 Jun  1 18:55 boinc_mmap_file
[2025-06-01 18:55:07] -rw------- 1 boinc boinc      4354 Jun  1 18:55 pilotlog.txt
[2025-06-01 18:55:07] -rw------- 1 boinc boinc   2555642 Jun  1 18:55 log.44871837._101051.job.log.1
[2025-06-01 18:55:07] -rw------- 1 boinc boinc       357 Jun  1 18:55 output.list
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc       620 Jun  1 18:55 runtime_log
[2025-06-01 18:55:07] -rw------- 1 boinc boinc   3010560 Jun  1 18:55 result.tar.gz
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc      8641 Jun  1 18:55 runtime_log.err
[2025-06-01 18:55:07] -rw------- 1 boinc boinc       653 Jun  1 18:55 omdKDmEmse7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkeeKDmgBGaRo.diag
[2025-06-01 18:55:07] -rw-r--r-- 1 boinc boinc     20558 Jun  1 18:55 stderr.txt
[2025-06-01 18:55:07] HITS file was successfully produced:
[2025-06-01 18:55:07] -rw------- 1 boinc boinc 195056341 Jun  1 18:54 shared/HITS.pool.root.1
[2025-06-01 18:55:07]  *** Contents of shared directory: ***
[2025-06-01 18:55:07] total 413132
[2025-06-01 18:55:07] -rw-r--r-- 2 boinc boinc 224444273 Jun  1 10:50 ATLAS.root_0
[2025-06-01 18:55:07] -rw-r--r-- 2 boinc boinc     15093 Jun  1 10:50 start_atlas.sh
[2025-06-01 18:55:07] -rw-r--r-- 2 boinc boinc    508879 Jun  1 10:50 input.tar.gz
[2025-06-01 18:55:07] -rw------- 1 boinc boinc 195056341 Jun  1 18:54 HITS.pool.root.1
[2025-06-01 18:55:07] -rw------- 1 boinc boinc   3010560 Jun  1 18:55 result.tar.gz
18:55:08 (634042): run_atlas exited; CPU time 57910.278886
18:55:08 (634042): called boinc_finish(0)

</stderr_txt>
]]>

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