Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
02:06:08 (4055938): wrapper (7.7.26015): starting
02:06:08 (4055938): wrapper: running run_atlas (--nthreads 4)
[2025-05-30 02:06:08] Arguments: --nthreads 4
[2025-05-30 02:06:08] Threads: 4
[2025-05-30 02:06:08] Checking for CVMFS
[2025-05-30 02:06:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 02:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 02:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 02:06:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 02:06:08] 2.12.7.0 3277520 658 85868 146580 0 56 2989275 4096001 2766 130560 0 1959964 99.996 231418 1674 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-30 02:06:08] CVMFS is ok
[2025-05-30 02:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 02:06:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-30 02:06:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-30 02:06:08] Further information can be found at the LHC@home message board.
[2025-05-30 02:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 02:06:08] Checking for apptainer binary...
[2025-05-30 02:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 02:06:08] Running /usr/bin/apptainer --version
[2025-05-30 02:06:08] apptainer version 1.2.3
[2025-05-30 02:06:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 02:06:08] Ryzen-7-7700-Zen4-Deb12
[2025-05-30 02:06:08] apptainer works
[2025-05-30 02:06:08] Set ATHENA_PROC_NUMBER=4
[2025-05-30 02:06:08] Set ATHENA_CORE_NUMBER=4
[2025-05-30 02:06:08] Starting ATLAS job with PandaID=6669512595
[2025-05-30 02:06:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 03:38:58]  *** The last 200 lines of the pilot log: ***
[2025-05-30 03:38:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-30 03:38:58]  is_altstaged=None
[2025-05-30 03:38:58]  is_tar=False
[2025-05-30 03:38:58]  lfn=log.44871837._097394.job.log.tgz.1
[2025-05-30 03:38:58]  mtime=0
[2025-05-30 03:38:58]  protocol_id=None
[2025-05-30 03:38:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-30 03:38:58]  replicas=None
[2025-05-30 03:38:58]  scope=mc23_13p6TeV
[2025-05-30 03:38:58]  status=None
[2025-05-30 03:38:58]  status_code=0
[2025-05-30 03:38:58]  storage_token=
[2025-05-30 03:38:58]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6669512595/log.44871837._097394.job.log.tgz.1
[2025-05-30 03:38:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/c0/log.44871837._097394.job.log.tgz.1
[2025-05-30 03:38:58]  workdir=None
[2025-05-30 03:38:58] ]
[2025-05-30 03:38:58] 2025-05-30 01:38:42,011 | INFO     | transferring file log.44871837._097394.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6669512595/log.44871837._097394.job.log.tgz.1 to /var/lib/boinc
[2025-05-30 03:38:58] 2025-05-30 01:38:42,011 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6669512595/log.44871837._097394.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.448718
[2025-05-30 03:38:58] 2025-05-30 01:38:42,034 | INFO     | adding to output.list: log.44871837._097394.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/c0/log.44871837._097394.job.log.tg
[2025-05-30 03:38:58] 2025-05-30 01:38:42,034 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-30 03:38:58] 2025-05-30 01:38:42,034 | INFO     | summary of transferred files:
[2025-05-30 03:38:58] 2025-05-30 01:38:42,034 | INFO     |  -- lfn=log.44871837._097394.job.log.tgz.1, status_code=0, status=transferred
[2025-05-30 03:38:58] 2025-05-30 01:38:42,034 | INFO     | stage-out finished correctly
[2025-05-30 03:38:58] 2025-05-30 01:38:42,076 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-30 03:38:58] 2025-05-30 01:38:42,651 | INFO     | job 6669512595 has state=finished
[2025-05-30 03:38:58] 2025-05-30 01:38:42,651 | INFO     | preparing for final server update for job 6669512595 in state='finished'
[2025-05-30 03:38:58] 2025-05-30 01:38:42,652 | INFO     | this job has now completed (state=finished)
[2025-05-30 03:38:58] 2025-05-30 01:38:42,652 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-30 03:38:58] 2025-05-30 01:38:42,652 | INFO     | log transfer has been attempted: DONE
[2025-05-30 03:38:58] 2025-05-30 01:38:42,652 | INFO     | job 6669512595 has finished - writing final server update
[2025-05-30 03:38:58] 2025-05-30 01:38:42,652 | INFO     | total number of processed events: 400 (read)
[2025-05-30 03:38:58] 2025-05-30 01:38:42,653 | INFO     | executing command: lscpu
[2025-05-30 03:38:58] 2025-05-30 01:38:42,667 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 03:38:58] 2025-05-30 01:38:44,208 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-30 03:38:58] 2025-05-30 01:38:44,209 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6669512595/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 03:38:58] 2025-05-30 01:38:44,210 | INFO     | extracted standard info from prmon json
[2025-05-30 03:38:58] 2025-05-30 01:38:44,210 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 03:38:58] 2025-05-30 01:38:44,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 03:38:58] 2025-05-30 01:38:44,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 03:38:58] 2025-05-30 01:38:44,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | fitting pss+swap vs Time
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | sum of square deviations: 183761585.0
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | sum of deviations: -2028715734.9999995
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | mean x: 1748566426.5
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | mean y: 2367014.476190476
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | -- intersect: 19306424623.32447
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | intersect: 19306424623.32447
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | chi2: 0.015357019116739267
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | -- intersect: 19306424623.32447
[2025-05-30 03:38:58] 2025-05-30 01:38:44,212 | INFO     | current memory leak: -11.04 B/s (using 84 data points, chi2=0.02)
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | ..............................
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . Timing measurements:
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . get job = 0 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . initial setup = 1 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . payload setup = 2 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . stage-in = 0 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . payload execution = 5530 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . stage-out = 0 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | . log creation = 0 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,213 | INFO     | ..............................
[2025-05-30 03:38:58] 2025-05-30 01:38:44,254 | INFO     | 
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | job summary report
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | --------------------------------------------------
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | PanDA job id: 6669512595
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | task id: 44871837
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | errors: (none)
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | pilot state: finished 
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | transexitcode: 0
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | exeerrorcode: 0
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | exeerrordiag: 
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | exitcode: 0
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | exitmsg: OK
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | cpuconsumptiontime: 21350 s
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | nevents: 400
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | neventsw: 0
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | pid: 4066162
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | pgrp: 4066162
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | corecount: 4
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | event service: False
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | sizes: {0: 2405125, 1: 2405239, 2: 2405473, 11: 2405501, 5536: 2441007, 5538: 2441121}
[2025-05-30 03:38:58] 2025-05-30 01:38:44,255 | INFO     | --------------------------------------------------
[2025-05-30 03:38:58] 2025-05-30 01:38:44,256 | INFO     | 
[2025-05-30 03:38:58] 2025-05-30 01:38:44,256 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-05-30 03:38:58] 2025-05-30 01:38:44,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 03:38:58] 2025-05-30 01:38:44,268 | INFO     | job 6669512595 has completed (purged errors)
[2025-05-30 03:38:58] 2025-05-30 01:38:44,268 | INFO     | overall cleanup function is called
[2025-05-30 03:38:58] 2025-05-30 01:38:44,272 | INFO     | PID=4059621 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-30 03:38:58] 2025-05-30 01:38:44,272 | INFO     | .. there are 4 such processes running
[2025-05-30 03:38:58] 2025-05-30 01:38:45,274 | INFO     | --- collectZombieJob: --- 10, [4066162]
[2025-05-30 03:38:58] 2025-05-30 01:38:45,274 | INFO     | zombie collector waiting for pid 4066162
[2025-05-30 03:38:58] 2025-05-30 01:38:45,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 03:38:58] 2025-05-30 01:38:45,274 | INFO     | collected zombie processes
[2025-05-30 03:38:58] 2025-05-30 01:38:45,274 | INFO     | will attempt to kill all subprocesses of pid=4066162
[2025-05-30 03:38:58] 2025-05-30 01:38:45,316 | INFO     | process IDs to be killed: [4066162] (in reverse order)
[2025-05-30 03:38:58] 2025-05-30 01:38:45,341 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 03:38:58] 2025-05-30 01:38:45,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 03:38:58] 2025-05-30 01:38:45,343 | INFO     | did not find any defunct processes belonging to 4066162
[2025-05-30 03:38:58] 2025-05-30 01:38:45,344 | INFO     | did not find any defunct processes belonging to 4066162
[2025-05-30 03:38:58] 2025-05-30 01:38:45,344 | INFO     | ready for new job
[2025-05-30 03:38:58] 2025-05-30 01:38:45,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 03:38:58] 2025-05-30 01:38:45,344 | INFO     | **************************************
[2025-05-30 03:38:58] 2025-05-30 01:38:45,345 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 03:38:58] 2025-05-30 01:38:45,345 | INFO     | **************************************
[2025-05-30 03:38:58] 2025-05-30 01:38:45,345 | INFO     | 
[2025-05-30 03:38:58] 2025-05-30 01:38:45,345 | INFO     | architecture information:
[2025-05-30 03:38:58] 2025-05-30 01:38:45,345 | INFO     | executing command: cat /etc/os-release
[2025-05-30 03:38:58] 2025-05-30 01:38:45,353 | INFO     | cat /etc/os-release:
[2025-05-30 03:38:58] NAME="CentOS Linux"
[2025-05-30 03:38:58] VERSION="7 (Core)"
[2025-05-30 03:38:58] ID="centos"
[2025-05-30 03:38:58] ID_LIKE="rhel fedora"
[2025-05-30 03:38:58] VERSION_ID="7"
[2025-05-30 03:38:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 03:38:58] ANSI_COLOR="0;31"
[2025-05-30 03:38:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 03:38:58] HOME_URL="https://www.centos.org/"
[2025-05-30 03:38:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 03:38:58] 
[2025-05-30 03:38:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 03:38:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 03:38:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 03:38:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 03:38:58] 
[2025-05-30 03:38:58] 2025-05-30 01:38:45,354 | INFO     | **************************************
[2025-05-30 03:38:58] 2025-05-30 01:38:45,854 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-05-30 03:38:58] 2025-05-30 01:38:45,862 | INFO     | sufficient remaining disk space (885388214272 B)
[2025-05-30 03:38:58] 2025-05-30 01:38:45,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 03:38:58] 2025-05-30 01:38:45,863 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 03:38:58] 2025-05-30 01:38:45,863 | INFO     | update_server=False
[2025-05-30 03:38:58] 2025-05-30 01:38:45,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 03:38:58] 2025-05-30 01:38:45,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 03:38:58] 2025-05-30 01:38:45,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 03:38:58] 2025-05-30 01:38:46,098 | INFO     | all job control threads have been joined
[2025-05-30 03:38:58] 2025-05-30 01:38:46,146 | INFO     | job.realtimelogging is not enabled
[2025-05-30 03:38:58] 2025-05-30 01:38:46,277 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 03:38:58] 2025-05-30 01:38:46,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 03:38:58] 2025-05-30 01:38:46,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 03:38:58] 2025-05-30 01:38:46,578 | INFO     | all payload control threads have been joined
[2025-05-30 03:38:58] 2025-05-30 01:38:46,844 | INFO     | all data control threads have been joined
[2025-05-30 03:38:58] 2025-05-30 01:38:46,866 | INFO     | [job] queue monitor thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:46,868 | INFO     | [job] retrieve thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,034 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,102 | INFO     | [job] control thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,290 | WARNING  | process 4066162 can no longer be monitored (due to stat problems) - aborting
[2025-05-30 03:38:58] 2025-05-30 01:38:47,319 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 03:38:58] 2025-05-30 01:38:47,361 | INFO     | number of running child processes to parent process 4066162: 1
[2025-05-30 03:38:58] 2025-05-30 01:38:47,361 | INFO     | maximum number of monitored processes: 6
[2025-05-30 03:38:58] 2025-05-30 01:38:47,361 | INFO     | aborting job monitoring since job object (job id=6669512595) has expired
[2025-05-30 03:38:58] 2025-05-30 01:38:47,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 03:38:58] 2025-05-30 01:38:47,361 | INFO     | will abort loop
[2025-05-30 03:38:58] 2025-05-30 01:38:47,430 | INFO     | [job] validate thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,490 | INFO     | [payload] validate_post thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,538 | INFO     | [payload] failed_post thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,582 | INFO     | [payload] control thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,598 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,846 | INFO     | [data] control thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:47,868 | INFO     | [data] copytool_out thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:48,034 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:48,067 | INFO     | [data] copytool_in thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:48,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 03:38:58] 2025-05-30 01:38:48,366 | INFO     | [job] job monitor thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:52,126 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 03:38:58] 2025-05-30 01:38:53,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647477548864)>', '<ExcThread(monitor, started 139646767986432)>']
[2025-05-30 03:38:58] 2025-05-30 01:38:53,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 03:38:58] 2025-05-30 01:38:53,306 | INFO     | [monitor] control thread has ended
[2025-05-30 03:38:58] 2025-05-30 01:38:58,247 | INFO     | all workflow threads have been joined
[2025-05-30 03:38:58] 2025-05-30 01:38:58,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 03:38:58] 2025-05-30 01:38:58,247 | INFO     | traces error code: 0
[2025-05-30 03:38:58] 2025-05-30 01:38:58,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 03:38:58] 2025-05-30 01:38:58,300 [wrapper] ==== pilot stdout END ====
[2025-05-30 03:38:58] 2025-05-30 01:38:58,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 03:38:58] 2025-05-30 01:38:58,303 [wrapper] pilotpid: 4059621
[2025-05-30 03:38:58] 2025-05-30 01:38:58,304 [wrapper] Pilot exit status: 0
[2025-05-30 03:38:58] 2025-05-30 01:38:58,308 [wrapper] pandaids: 6669512595
[2025-05-30 03:38:58] 2025-05-30 01:38:58,322 [wrapper] cleanup supervisor_pilot 4163771 4059622
[2025-05-30 03:38:58] 2025-05-30 01:38:58,323 [wrapper] Test setup, not cleaning
[2025-05-30 03:38:58] 2025-05-30 01:38:58,324 [wrapper] apfmon messages muted
[2025-05-30 03:38:58] 2025-05-30 01:38:58,325 [wrapper] ==== wrapper stdout END ====
[2025-05-30 03:38:58] 2025-05-30 01:38:58,327 [wrapper] ==== wrapper stderr END ====
[2025-05-30 03:38:58]  *** Error codes and diagnostics ***
[2025-05-30 03:38:58]     "exeErrorCode": 0,
[2025-05-30 03:38:58]     "exeErrorDiag": "",
[2025-05-30 03:38:58]     "pilotErrorCode": 0,
[2025-05-30 03:38:58]     "pilotErrorDiag": "",
[2025-05-30 03:38:58]  *** Listing of results directory ***
[2025-05-30 03:38:58] total 412172
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc    495897 May 29 10:10 pilot3.tar.gz
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc      5111 May 29 10:18 queuedata.json
[2025-05-30 03:38:58] -rwx------ 1 boinc boinc     37140 May 29 10:19 runpilot2-wrapper.sh
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc       100 May 30 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 03:38:58] -rwxr-xr-x 1 boinc boinc      7986 May 30 02:06 run_atlas
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc       105 May 30 02:06 job.xml
[2025-05-30 03:38:58] -rw-r--r-- 2 boinc boinc     15093 May 30 02:06 start_atlas.sh
[2025-05-30 03:38:58] drwxrwx--x 2 boinc boinc      4096 May 30 02:06 shared
[2025-05-30 03:38:58] -rw-r--r-- 2 boinc boinc    508872 May 30 02:06 input.tar.gz
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc      9222 May 30 02:06 init_data.xml
[2025-05-30 03:38:58] -rw-r--r-- 2 boinc boinc 223050228 May 30 02:06 EVNT.44871834._003836.pool.root.1
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc         0 May 30 02:06 boinc_lockfile
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc      2558 May 30 02:06 pandaJob.out
[2025-05-30 03:38:58] -rw------- 1 boinc boinc    992366 May 30 02:06 agis_schedconf.cvmfs.json
[2025-05-30 03:38:58] -rw------- 1 boinc boinc   1603667 May 30 02:06 agis_ddmendpoints.agis.ALL.json
[2025-05-30 03:38:58] drwx------ 4 boinc boinc      4096 May 30 02:06 pilot3
[2025-05-30 03:38:58] -rw------- 1 boinc boinc        95 May 30 03:38 pilot_heartbeat.json
[2025-05-30 03:38:58] -rw------- 1 boinc boinc 193588695 May 30 03:38 HITS.44871837._097394.pool.root.1
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc       529 May 30 03:38 boinc_task_state.xml
[2025-05-30 03:38:58] -rw------- 1 boinc boinc      1016 May 30 03:38 memory_monitor_summary.json
[2025-05-30 03:38:58] -rw------- 1 boinc boinc    239307 May 30 03:38 log.44871837._097394.job.log.tgz.1
[2025-05-30 03:38:58] -rw------- 1 boinc boinc      7673 May 30 03:38 heartbeat.json
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc      8192 May 30 03:38 boinc_mmap_file
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc        27 May 30 03:38 wrapper_checkpoint.txt
[2025-05-30 03:38:58] -rw------- 1 boinc boinc      4961 May 30 03:38 pilotlog.txt
[2025-05-30 03:38:58] -rw------- 1 boinc boinc    547757 May 30 03:38 log.44871837._097394.job.log.1
[2025-05-30 03:38:58] -rw------- 1 boinc boinc       357 May 30 03:38 output.list
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc       620 May 30 03:38 runtime_log
[2025-05-30 03:38:58] -rw------- 1 boinc boinc    808960 May 30 03:38 result.tar.gz
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc      8779 May 30 03:38 runtime_log.err
[2025-05-30 03:38:58] -rw------- 1 boinc boinc       654 May 30 03:38 pHAODmSfne7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp9dKDmZqGBPn.diag
[2025-05-30 03:38:58] -rw-r--r-- 1 boinc boinc     21482 May 30 03:38 stderr.txt
[2025-05-30 03:38:58] HITS file was successfully produced:
[2025-05-30 03:38:58] -rw------- 1 boinc boinc 193588695 May 30 03:38 shared/HITS.pool.root.1
[2025-05-30 03:38:58]  *** Contents of shared directory: ***
[2025-05-30 03:38:58] total 408192
[2025-05-30 03:38:58] -rw-r--r-- 2 boinc boinc     15093 May 30 02:06 start_atlas.sh
[2025-05-30 03:38:58] -rw-r--r-- 2 boinc boinc    508872 May 30 02:06 input.tar.gz
[2025-05-30 03:38:58] -rw-r--r-- 2 boinc boinc 223050228 May 30 02:06 ATLAS.root_0
[2025-05-30 03:38:58] -rw------- 1 boinc boinc 193588695 May 30 03:38 HITS.pool.root.1
[2025-05-30 03:38:58] -rw------- 1 boinc boinc    808960 May 30 03:38 result.tar.gz
03:38:59 (4055938): run_atlas exited; CPU time 21375.189307
03:38:59 (4055938): called boinc_finish(0)

</stderr_txt>
]]>

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