Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:53 (3922701): wrapper (7.7.26015): starting
11:43:53 (3922701): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:43:53] Arguments: --nthreads 4
[2025-06-04 11:43:53] Threads: 4
[2025-06-04 11:43:53] Checking for CVMFS
[2025-06-04 11:43:53] No cvmfs_config command found, will try listing directly
[2025-06-04 11:43:53] CVMFS is ok
[2025-06-04 11:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:43:53] Further information can be found at the LHC@home message board.
[2025-06-04 11:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:43:53] Checking for apptainer binary...
[2025-06-04 11:43:53] which: no apptainer in ((null))
[2025-06-04 11:43:53] apptainer is not installed, using version from CVMFS
[2025-06-04 11:43:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:43:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-04 11:43:53] apptainer works
[2025-06-04 11:43:53] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:43:53] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:43:53] Starting ATLAS job with PandaID=6668862976
[2025-06-04 11:43:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:34:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:34:29] 2025-06-04 13:34:04,470 | INFO     | job 6668862976 has finished - writing final server update
[2025-06-04 15:34:29] 2025-06-04 13:34:04,471 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2162112/.job.ad'
[2025-06-04 15:34:29] 2025-06-04 13:34:04,471 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:34:29] 2025-06-04 13:34:04,475 | INFO     | executing command: lscpu
[2025-06-04 15:34:29] 2025-06-04 13:34:04,542 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:34:29] 2025-06-04 13:34:06,597 | INFO     | monitor loop #1007: job 0:6668862976 is in state 'finished'
[2025-06-04 15:34:29] 2025-06-04 13:34:06,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,057 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 15:34:29] 2025-06-04 13:34:09,058 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6668862976/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,059 | INFO     | extracted standard info from prmon json
[2025-06-04 15:34:29] 2025-06-04 13:34:09,059 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:34:29] 2025-06-04 13:34:09,059 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:34:29] 2025-06-04 13:34:09,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:34:29] 2025-06-04 13:34:09,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:34:29] 2025-06-04 13:34:09,065 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:34:29] 2025-06-04 13:34:09,065 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 15:34:29] 2025-06-04 13:34:09,067 | INFO     | sum of deviations: 31835882157.499996
[2025-06-04 15:34:29] 2025-06-04 13:34:09,067 | INFO     | mean x: 1749037132.5
[2025-06-04 15:34:29] 2025-06-04 13:34:09,067 | INFO     | mean y: 2330200.4557522126
[2025-06-04 15:34:29] 2025-06-04 13:34:09,067 | INFO     | -- intersect: -15554484535.869593
[2025-06-04 15:34:29] 2025-06-04 13:34:09,067 | INFO     | intersect: -15554484535.869593
[2025-06-04 15:34:29] 2025-06-04 13:34:09,068 | INFO     | chi2: 1.747661996438534
[2025-06-04 15:34:29] 2025-06-04 13:34:09,068 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,070 | INFO     | sum of deviations: 31004461399.000008
[2025-06-04 15:34:29] 2025-06-04 13:34:09,070 | INFO     | mean x: 1749036980.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,070 | INFO     | mean y: 2329654.6787330317
[2025-06-04 15:34:29] 2025-06-04 13:34:09,070 | INFO     | -- intersect: -16199976351.943857
[2025-06-04 15:34:29] 2025-06-04 13:34:09,070 | INFO     | intersect: -16199976351.943857
[2025-06-04 15:34:29] 2025-06-04 13:34:09,070 | INFO     | chi2: 1.7487389478475037
[2025-06-04 15:34:29] 2025-06-04 13:34:09,071 | INFO     | current chi2=1.7487389478475037 (change=-0.06162240817528476 %)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,071 | INFO     | right removable region: 220
[2025-06-04 15:34:29] 2025-06-04 13:34:09,071 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,072 | INFO     | sum of deviations: -7449425164.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,073 | INFO     | mean x: 1749037285.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,073 | INFO     | mean y: 2355787.8687782804
[2025-06-04 15:34:29] 2025-06-04 13:34:09,073 | INFO     | -- intersect: 3895275763.958146
[2025-06-04 15:34:29] 2025-06-04 13:34:09,073 | INFO     | intersect: 3895275763.958146
[2025-06-04 15:34:29] 2025-06-04 13:34:09,073 | INFO     | chi2: 0.016371488077020928
[2025-06-04 15:34:29] 2025-06-04 13:34:09,073 | INFO     | current chi2=0.016371488077020928 (change=99.06323487548602 %)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,074 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,075 | INFO     | sum of deviations: -7362124953.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,075 | INFO     | mean x: 1749037437.5
[2025-06-04 15:34:29] 2025-06-04 13:34:09,075 | INFO     | mean y: 2355713.037037037
[2025-06-04 15:34:29] 2025-06-04 13:34:09,075 | INFO     | -- intersect: 4123064472.0052075
[2025-06-04 15:34:29] 2025-06-04 13:34:09,075 | INFO     | intersect: 4123064472.0052075
[2025-06-04 15:34:29] 2025-06-04 13:34:09,076 | INFO     | chi2: 0.012769759251435425
[2025-06-04 15:34:29] 2025-06-04 13:34:09,076 | INFO     | current chi2=0.012769759251435425 (change=22.000008848559716 %)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,076 | INFO     | left removable region: 20
[2025-06-04 15:34:29] 2025-06-04 13:34:09,076 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | sum of deviations: -4056604279.4999995
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | mean x: 1749037559.5
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | mean y: 2353221.535
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | -- intersect: 2862604752.900119
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | intersect: 2862604752.900119
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | chi2: 0.009643720446418669
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | -- intersect: 2862604752.900119
[2025-06-04 15:34:29] 2025-06-04 13:34:09,078 | INFO     | current memory leak: -1.64 B/s (using 200 data points, chi2=0.01)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,079 | INFO     | ..............................
[2025-06-04 15:34:29] 2025-06-04 13:34:09,079 | INFO     | . Timing measurements:
[2025-06-04 15:34:29] 2025-06-04 13:34:09,079 | INFO     | . get job = 0 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,079 | INFO     | . initial setup = 1 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,079 | INFO     | . payload setup = 6 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,080 | INFO     | . stage-in = 0 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,080 | INFO     | . payload execution = 13770 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,080 | INFO     | . stage-out = 1 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,080 | INFO     | . log creation = 0 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,080 | INFO     | ..............................
[2025-06-04 15:34:29] 2025-06-04 13:34:09,557 | INFO     | 
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | job summary report
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | --------------------------------------------------
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | PanDA job id: 6668862976
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | task id: 44871837
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | errors: (none)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | pilot state: finished 
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | transexitcode: 0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | exeerrorcode: 0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,558 | INFO     | exeerrordiag: 
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | exitcode: 0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | exitmsg: OK
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | cpuconsumptiontime: 53308 s
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | nevents: 400
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | neventsw: 0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | pid: 3945297
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | pgrp: 3945297
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | corecount: 4
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | event service: False
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 11: 2405535, 13780: 2435645, 13781: 2435644, 13782: 2445844, 13784: 2445900, 13790: 2446070}
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | --------------------------------------------------
[2025-06-04 15:34:29] 2025-06-04 13:34:09,559 | INFO     | 
[2025-06-04 15:34:29] 2025-06-04 13:34:09,560 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-04 15:34:29] 2025-06-04 13:34:09,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,580 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,580 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | job 6668862976 has completed (purged errors)
[2025-06-04 15:34:29] 2025-06-04 13:34:09,582 | INFO     | overall cleanup function is called
[2025-06-04 15:34:29] 2025-06-04 13:34:10,590 | INFO     | --- collectZombieJob: --- 10, [3945297]
[2025-06-04 15:34:29] 2025-06-04 13:34:10,591 | INFO     | zombie collector waiting for pid 3945297
[2025-06-04 15:34:29] 2025-06-04 13:34:10,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:34:29] 2025-06-04 13:34:10,591 | INFO     | collected zombie processes
[2025-06-04 15:34:29] 2025-06-04 13:34:10,591 | INFO     | will attempt to kill all subprocesses of pid=3945297
[2025-06-04 15:34:29] 2025-06-04 13:34:10,966 | INFO     | process IDs to be killed: [3945297] (in reverse order)
[2025-06-04 15:34:29] 2025-06-04 13:34:11,076 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:34:29] 2025-06-04 13:34:11,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:34:29] 2025-06-04 13:34:11,088 | INFO     | did not find any defunct processes belonging to 3945297
[2025-06-04 15:34:29] 2025-06-04 13:34:11,100 | INFO     | did not find any defunct processes belonging to 3945297
[2025-06-04 15:34:29] 2025-06-04 13:34:11,100 | INFO     | ready for new job
[2025-06-04 15:34:29] 2025-06-04 13:34:11,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:34:29] 2025-06-04 13:34:11,103 | INFO     | **************************************
[2025-06-04 15:34:29] 2025-06-04 13:34:11,103 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:34:29] 2025-06-04 13:34:11,103 | INFO     | **************************************
[2025-06-04 15:34:29] 2025-06-04 13:34:11,103 | INFO     | 
[2025-06-04 15:34:29] 2025-06-04 13:34:11,107 | INFO     | architecture information:
[2025-06-04 15:34:29] 2025-06-04 13:34:11,107 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:34:29] 2025-06-04 13:34:11,122 | INFO     | cat /etc/os-release:
[2025-06-04 15:34:29] NAME="CentOS Linux"
[2025-06-04 15:34:29] VERSION="7 (Core)"
[2025-06-04 15:34:29] ID="centos"
[2025-06-04 15:34:29] ID_LIKE="rhel fedora"
[2025-06-04 15:34:29] VERSION_ID="7"
[2025-06-04 15:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:34:29] ANSI_COLOR="0;31"
[2025-06-04 15:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:34:29] HOME_URL="https://www.centos.org/"
[2025-06-04 15:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:34:29] 
[2025-06-04 15:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:34:29] 
[2025-06-04 15:34:29] 2025-06-04 13:34:11,122 | INFO     | **************************************
[2025-06-04 15:34:29] 2025-06-04 13:34:11,625 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-04 15:34:29] 2025-06-04 13:34:11,641 | INFO     | sufficient remaining disk space (646685130752 B)
[2025-06-04 15:34:29] 2025-06-04 13:34:11,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:34:29] 2025-06-04 13:34:11,642 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:34:29] 2025-06-04 13:34:11,642 | INFO     | update_server=False
[2025-06-04 15:34:29] 2025-06-04 13:34:11,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:34:29] 2025-06-04 13:34:11,642 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:34:29] 2025-06-04 13:34:11,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:34:29] 2025-06-04 13:34:11,643 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:34:29] 2025-06-04 13:34:11,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:34:29] 2025-06-04 13:34:11,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:34:29] 2025-06-04 13:34:11,719 | INFO     | all data control threads have been joined
[2025-06-04 15:34:29] 2025-06-04 13:34:12,182 | INFO     | all payload control threads have been joined
[2025-06-04 15:34:29] 2025-06-04 13:34:12,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:34:29] 2025-06-04 13:34:12,613 | INFO     | aborting loop
[2025-06-04 15:34:29] 2025-06-04 13:34:12,644 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:12,725 | INFO     | [data] control thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:12,797 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:12,871 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,111 | INFO     | all job control threads have been joined
[2025-06-04 15:34:29] 2025-06-04 13:34:13,183 | INFO     | [payload] control thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,232 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:34:29] 2025-06-04 13:34:13,559 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,607 | INFO     | [job] validate thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,618 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,649 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:13,947 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:14,110 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:14,116 | INFO     | [job] control thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:14,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:34:29] 2025-06-04 13:34:15,189 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:17,537 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:34:29] 2025-06-04 13:34:19,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23221955589952)>', '<ExcThread(monitor, started 23221711623936)>']
[2025-06-04 15:34:29] 2025-06-04 13:34:19,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:34:29] 2025-06-04 13:34:19,682 | INFO     | [monitor] control thread has ended
[2025-06-04 15:34:29] 2025-06-04 13:34:24,319 | INFO     | all workflow threads have been joined
[2025-06-04 15:34:29] 2025-06-04 13:34:24,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:34:29] 2025-06-04 13:34:24,320 | INFO     | traces error code: 0
[2025-06-04 15:34:29] 2025-06-04 13:34:24,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:34:29] 2025-06-04 13:34:24,498 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:34:29] 2025-06-04 13:34:24,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:34:29] 2025-06-04 13:34:24,504 [wrapper] pilotpid: 3929026
[2025-06-04 15:34:29] 2025-06-04 13:34:24,507 [wrapper] Pilot exit status: 0
[2025-06-04 15:34:29] 2025-06-04 13:34:24,519 [wrapper] pandaids: 6668862976
[2025-06-04 15:34:29] 2025-06-04 13:34:24,586 [wrapper] cleanup supervisor_pilot  112879 3929027
[2025-06-04 15:34:29] 2025-06-04 13:34:24,590 [wrapper] Test setup, not cleaning
[2025-06-04 15:34:29] 2025-06-04 13:34:24,593 [wrapper] apfmon messages muted
[2025-06-04 15:34:29] 2025-06-04 13:34:24,596 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:34:29] 2025-06-04 13:34:24,599 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:34:29]  *** Error codes and diagnostics ***
[2025-06-04 15:34:29]     "exeErrorCode": 0,
[2025-06-04 15:34:29]     "exeErrorDiag": "",
[2025-06-04 15:34:29]     "pilotErrorCode": 0,
[2025-06-04 15:34:29]     "pilotErrorDiag": "",
[2025-06-04 15:34:29]  *** Listing of results directory ***
[2025-06-04 15:34:29] total 425860
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc    495897 May 28 21:50 pilot3.tar.gz
[2025-06-04 15:34:29] -rwx------ 1 boinc boinc     37140 May 28 21:54 runpilot2-wrapper.sh
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc      5111 May 28 21:54 queuedata.json
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:34:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:43 run_atlas
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:43 job.xml
[2025-06-04 15:34:29] -rw-r--r-- 2 boinc boinc 221953562 Jun  4 11:43 EVNT.44871834._003489.pool.root.1
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc      6635 Jun  4 11:43 init_data.xml
[2025-06-04 15:34:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 15:34:29] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:43 shared
[2025-06-04 15:34:29] -rw-r--r-- 2 boinc boinc    508877 Jun  4 11:43 input.tar.gz
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:43 boinc_lockfile
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc      2559 Jun  4 11:43 pandaJob.out
[2025-06-04 15:34:29] -rw------- 1 boinc boinc    986766 Jun  4 11:44 agis_schedconf.cvmfs.json
[2025-06-04 15:34:29] drwx------ 4 boinc boinc      4096 Jun  4 11:44 pilot3
[2025-06-04 15:34:29] -rw------- 1 boinc boinc        95 Jun  4 15:33 pilot_heartbeat.json
[2025-06-04 15:34:29] -rw------- 1 boinc boinc 207075955 Jun  4 15:33 HITS.44871837._089670.pool.root.1
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc       528 Jun  4 15:33 boinc_task_state.xml
[2025-06-04 15:34:29] -rw------- 1 boinc boinc      1035 Jun  4 15:33 memory_monitor_summary.json
[2025-06-04 15:34:29] -rw------- 1 boinc boinc   1598969 Jun  4 15:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:34:29] -rw------- 1 boinc boinc    324450 Jun  4 15:34 log.44871837._089670.job.log.tgz.1
[2025-06-04 15:34:29] -rw------- 1 boinc boinc      7723 Jun  4 15:34 heartbeat.json
[2025-06-04 15:34:29] -rw------- 1 boinc boinc      4486 Jun  4 15:34 pilotlog.txt
[2025-06-04 15:34:29] -rw------- 1 boinc boinc   1285930 Jun  4 15:34 log.44871837._089670.job.log.1
[2025-06-04 15:34:29] -rw------- 1 boinc boinc       357 Jun  4 15:34 output.list
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc       620 Jun  4 15:34 runtime_log
[2025-06-04 15:34:29] -rw------- 1 boinc boinc   1628160 Jun  4 15:34 result.tar.gz
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc      9026 Jun  4 15:34 runtime_log.err
[2025-06-04 15:34:29] -rw------- 1 boinc boinc       664 Jun  4 15:34 kVINDm21be7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbycKDmplSXtm.diag
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc        26 Jun  4 15:34 wrapper_checkpoint.txt
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc      8192 Jun  4 15:34 boinc_mmap_file
[2025-06-04 15:34:29] -rw-r--r-- 1 boinc boinc     20995 Jun  4 15:34 stderr.txt
[2025-06-04 15:34:29] HITS file was successfully produced:
[2025-06-04 15:34:29] -rw------- 1 boinc boinc 207075955 Jun  4 15:33 shared/HITS.pool.root.1
[2025-06-04 15:34:29]  *** Contents of shared directory: ***
[2025-06-04 15:34:29] total 421092
[2025-06-04 15:34:29] -rw-r--r-- 2 boinc boinc 221953562 Jun  4 11:43 ATLAS.root_0
[2025-06-04 15:34:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 15:34:29] -rw-r--r-- 2 boinc boinc    508877 Jun  4 11:43 input.tar.gz
[2025-06-04 15:34:29] -rw------- 1 boinc boinc 207075955 Jun  4 15:33 HITS.pool.root.1
[2025-06-04 15:34:29] -rw------- 1 boinc boinc   1628160 Jun  4 15:34 result.tar.gz
15:34:31 (3922701): run_atlas exited; CPU time 53874.554386
15:34:31 (3922701): called boinc_finish(0)

</stderr_txt>
]]>

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