Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:03:15 (856007): wrapper (7.7.26015): starting
19:03:15 (856007): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 19:03:15] Arguments: --nthreads 4
[2025-06-03 19:03:15] Threads: 4
[2025-06-03 19:03:15] Checking for CVMFS
[2025-06-03 19:03:15] No cvmfs_config command found, will try listing directly
[2025-06-03 19:03:15] CVMFS is ok
[2025-06-03 19:03:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:03:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:03:15] Further information can be found at the LHC@home message board.
[2025-06-03 19:03:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:03:15] Checking for apptainer binary...
[2025-06-03 19:03:15] which: no apptainer in ((null))
[2025-06-03 19:03:15] apptainer is not installed, using version from CVMFS
[2025-06-03 19:03:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:03:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-03 19:03:15] apptainer works
[2025-06-03 19:03:15] Set ATHENA_PROC_NUMBER=4
[2025-06-03 19:03:15] Set ATHENA_CORE_NUMBER=4
[2025-06-03 19:03:15] Starting ATLAS job with PandaID=6672835613
[2025-06-03 19:03:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:47:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:47:28] 2025-06-03 21:45:31,822 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3236426/.job.ad'
[2025-06-03 23:47:28] 2025-06-03 21:45:31,822 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:47:28] 2025-06-03 21:45:31,826 | INFO     | executing command: lscpu
[2025-06-03 23:47:28] 2025-06-03 21:45:31,868 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:47:28] 2025-06-03 21:45:33,270 | INFO     | monitor loop #1225: job 0:6672835613 is in state 'finished'
[2025-06-03 23:47:28] 2025-06-03 21:45:33,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:47:28] 2025-06-03 21:45:33,668 | INFO     | PID=860360 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 23:47:28] 2025-06-03 21:45:33,668 | INFO     | .. there are 5 such processes running
[2025-06-03 23:47:28] 2025-06-03 21:45:35,478 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:47:28] 2025-06-03 21:45:35,478 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6672835613/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,479 | INFO     | extracted standard info from prmon json
[2025-06-03 23:47:28] 2025-06-03 21:45:35,479 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:47:28] 2025-06-03 21:45:35,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:47:28] 2025-06-03 21:45:35,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:47:28] 2025-06-03 21:45:35,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:47:28] 2025-06-03 21:45:35,485 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:47:28] 2025-06-03 21:45:35,486 | INFO     | sum of square deviations: 6590404498.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,488 | INFO     | sum of deviations: 16369452540.999996
[2025-06-03 23:47:28] 2025-06-03 21:45:35,488 | INFO     | mean x: 1748978653.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,488 | INFO     | mean y: 2345086.974729242
[2025-06-03 23:47:28] 2025-06-03 21:45:35,489 | INFO     | -- intersect: -4341822720.053494
[2025-06-03 23:47:28] 2025-06-03 21:45:35,489 | INFO     | intersect: -4341822720.053494
[2025-06-03 23:47:28] 2025-06-03 21:45:35,489 | INFO     | chi2: 1.7108731597561344
[2025-06-03 23:47:28] 2025-06-03 21:45:35,490 | INFO     | sum of square deviations: 6239923508.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,492 | INFO     | sum of deviations: 16101845235.999989
[2025-06-03 23:47:28] 2025-06-03 21:45:35,492 | INFO     | mean x: 1748978500.5
[2025-06-03 23:47:28] 2025-06-03 21:45:35,492 | INFO     | mean y: 2344970.5220588236
[2025-06-03 23:47:28] 2025-06-03 21:45:35,492 | INFO     | -- intersect: -4510816304.6181
[2025-06-03 23:47:28] 2025-06-03 21:45:35,492 | INFO     | intersect: -4510816304.6181
[2025-06-03 23:47:28] 2025-06-03 21:45:35,493 | INFO     | chi2: 1.7114338391354518
[2025-06-03 23:47:28] 2025-06-03 21:45:35,493 | INFO     | current chi2=1.7114338391354518 (change=-0.03277153400415038 %)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,493 | INFO     | right removable region: 271
[2025-06-03 23:47:28] 2025-06-03 21:45:35,494 | INFO     | sum of square deviations: 6239923508.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,496 | INFO     | sum of deviations: -28877727691.999992
[2025-06-03 23:47:28] 2025-06-03 21:45:35,496 | INFO     | mean x: 1748978805.5
[2025-06-03 23:47:28] 2025-06-03 21:45:35,496 | INFO     | mean y: 2364638.845588235
[2025-06-03 23:47:28] 2025-06-03 21:45:35,496 | INFO     | -- intersect: 8096459641.7019
[2025-06-03 23:47:28] 2025-06-03 21:45:35,496 | INFO     | intersect: 8096459641.7019
[2025-06-03 23:47:28] 2025-06-03 21:45:35,497 | INFO     | chi2: 0.09207018364373903
[2025-06-03 23:47:28] 2025-06-03 21:45:35,497 | INFO     | current chi2=0.09207018364373903 (change=94.61852662082427 %)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,497 | INFO     | sum of square deviations: 5902093918.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,499 | INFO     | sum of deviations: -27485157045.000004
[2025-06-03 23:47:28] 2025-06-03 21:45:35,500 | INFO     | mean x: 1748978958.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,500 | INFO     | mean y: 2363998.797752809
[2025-06-03 23:47:28] 2025-06-03 21:45:35,500 | INFO     | -- intersect: 8147093987.323574
[2025-06-03 23:47:28] 2025-06-03 21:45:35,500 | INFO     | intersect: 8147093987.323574
[2025-06-03 23:47:28] 2025-06-03 21:45:35,500 | INFO     | chi2: 0.08821707303028477
[2025-06-03 23:47:28] 2025-06-03 21:45:35,501 | INFO     | current chi2=0.08821707303028477 (change=4.184971139368729 %)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,501 | INFO     | left removable region: 20
[2025-06-03 23:47:28] 2025-06-03 21:45:35,501 | INFO     | sum of square deviations: 4903347750.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,503 | INFO     | sum of deviations: -14822762587.999994
[2025-06-03 23:47:28] 2025-06-03 21:45:35,503 | INFO     | mean x: 1748979080.0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,503 | INFO     | mean y: 2358250.645418327
[2025-06-03 23:47:28] 2025-06-03 21:45:35,503 | INFO     | -- intersect: 5289501442.604147
[2025-06-03 23:47:28] 2025-06-03 21:45:35,504 | INFO     | intersect: 5289501442.604147
[2025-06-03 23:47:28] 2025-06-03 21:45:35,504 | INFO     | chi2: 0.06138826849538635
[2025-06-03 23:47:28] 2025-06-03 21:45:35,504 | INFO     | -- intersect: 5289501442.604147
[2025-06-03 23:47:28] 2025-06-03 21:45:35,504 | INFO     | current memory leak: -3.02 B/s (using 251 data points, chi2=0.06)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,505 | INFO     | ..............................
[2025-06-03 23:47:28] 2025-06-03 21:45:35,505 | INFO     | . Timing measurements:
[2025-06-03 23:47:28] 2025-06-03 21:45:35,505 | INFO     | . get job = 0 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,505 | INFO     | . initial setup = 1 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,505 | INFO     | . payload setup = 6 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,505 | INFO     | . stage-in = 0 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,506 | INFO     | . payload execution = 16889 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,506 | INFO     | . stage-out = 1 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,506 | INFO     | . log creation = 0 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,506 | INFO     | ..............................
[2025-06-03 23:47:28] 2025-06-03 21:45:35,617 | INFO     | 
[2025-06-03 23:47:28] 2025-06-03 21:45:35,617 | INFO     | job summary report
[2025-06-03 23:47:28] 2025-06-03 21:45:35,617 | INFO     | --------------------------------------------------
[2025-06-03 23:47:28] 2025-06-03 21:45:35,617 | INFO     | PanDA job id: 6672835613
[2025-06-03 23:47:28] 2025-06-03 21:45:35,617 | INFO     | task id: 44871837
[2025-06-03 23:47:28] 2025-06-03 21:45:35,618 | INFO     | errors: (none)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:47:28] 2025-06-03 21:45:35,618 | INFO     | pilot state: finished 
[2025-06-03 23:47:28] 2025-06-03 21:45:35,618 | INFO     | transexitcode: 0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,618 | INFO     | exeerrorcode: 0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,618 | INFO     | exeerrordiag: 
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | exitcode: 0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | exitmsg: OK
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | cpuconsumptiontime: 64719 s
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | nevents: 400
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | neventsw: 0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | pid: 867129
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | pgrp: 867129
[2025-06-03 23:47:28] 2025-06-03 21:45:35,619 | INFO     | corecount: 4
[2025-06-03 23:47:28] 2025-06-03 21:45:35,620 | INFO     | event service: False
[2025-06-03 23:47:28] 2025-06-03 21:45:35,620 | INFO     | sizes: {0: 2405194, 5: 2405400, 11: 2405456, 16900: 2436910, 16902: 2445873, 16906: 2445929, 16913: 2446227}
[2025-06-03 23:47:28] 2025-06-03 21:45:35,620 | INFO     | --------------------------------------------------
[2025-06-03 23:47:28] 2025-06-03 21:45:35,620 | INFO     | 
[2025-06-03 23:47:28] 2025-06-03 21:45:35,620 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-03 23:47:28] 2025-06-03 21:45:35,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | job 6672835613 has completed (purged errors)
[2025-06-03 23:47:28] 2025-06-03 21:45:35,642 | INFO     | overall cleanup function is called
[2025-06-03 23:47:28] 2025-06-03 21:45:36,650 | INFO     | --- collectZombieJob: --- 10, [867129]
[2025-06-03 23:47:28] 2025-06-03 21:45:36,651 | INFO     | zombie collector waiting for pid 867129
[2025-06-03 23:47:28] 2025-06-03 21:45:36,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:47:28] 2025-06-03 21:45:36,651 | INFO     | collected zombie processes
[2025-06-03 23:47:28] 2025-06-03 21:45:36,651 | INFO     | will attempt to kill all subprocesses of pid=867129
[2025-06-03 23:47:28] 2025-06-03 21:45:36,843 | INFO     | process IDs to be killed: [867129] (in reverse order)
[2025-06-03 23:47:28] 2025-06-03 21:45:36,898 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:47:28] 2025-06-03 21:45:36,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:47:28] 2025-06-03 21:45:36,908 | INFO     | did not find any defunct processes belonging to 867129
[2025-06-03 23:47:28] 2025-06-03 21:45:36,916 | INFO     | did not find any defunct processes belonging to 867129
[2025-06-03 23:47:28] 2025-06-03 21:45:36,916 | INFO     | ready for new job
[2025-06-03 23:47:28] 2025-06-03 21:45:36,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:47:28] 2025-06-03 21:45:36,918 | INFO     | **************************************
[2025-06-03 23:47:28] 2025-06-03 21:45:36,919 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:47:28] 2025-06-03 21:45:36,919 | INFO     | **************************************
[2025-06-03 23:47:28] 2025-06-03 21:45:36,919 | INFO     | 
[2025-06-03 23:47:28] 2025-06-03 21:45:36,922 | INFO     | architecture information:
[2025-06-03 23:47:28] 2025-06-03 21:45:36,922 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:47:28] 2025-06-03 21:45:36,936 | INFO     | cat /etc/os-release:
[2025-06-03 23:47:28] NAME="CentOS Linux"
[2025-06-03 23:47:28] VERSION="7 (Core)"
[2025-06-03 23:47:28] ID="centos"
[2025-06-03 23:47:28] ID_LIKE="rhel fedora"
[2025-06-03 23:47:28] VERSION_ID="7"
[2025-06-03 23:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:47:28] ANSI_COLOR="0;31"
[2025-06-03 23:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:47:28] HOME_URL="https://www.centos.org/"
[2025-06-03 23:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:47:28] 
[2025-06-03 23:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:47:28] 
[2025-06-03 23:47:28] 2025-06-03 21:45:36,937 | INFO     | **************************************
[2025-06-03 23:47:28] 2025-06-03 21:45:37,440 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-03 23:47:28] 2025-06-03 21:45:37,453 | INFO     | sufficient remaining disk space (1651196821504 B)
[2025-06-03 23:47:28] 2025-06-03 21:45:37,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:47:28] 2025-06-03 21:45:37,454 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:47:28] 2025-06-03 21:45:37,454 | INFO     | update_server=False
[2025-06-03 23:47:28] 2025-06-03 21:45:37,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:47:28] 2025-06-03 21:45:37,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:47:28] 2025-06-03 21:45:37,455 | INFO     | aborting loop
[2025-06-03 23:47:28] 2025-06-03 21:45:37,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:47:28] 2025-06-03 21:45:37,679 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:47:28] 2025-06-03 21:45:37,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:47:28] 2025-06-03 21:45:37,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:47:28] 2025-06-03 21:45:38,235 | INFO     | all payload control threads have been joined
[2025-06-03 23:47:28] 2025-06-03 21:45:38,433 | INFO     | all job control threads have been joined
[2025-06-03 23:47:28] 2025-06-03 21:45:38,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:47:28] 2025-06-03 21:45:38,459 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,460 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,461 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,473 | INFO     | all data control threads have been joined
[2025-06-03 23:47:28] 2025-06-03 21:45:38,511 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,699 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,948 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:38,957 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:39,036 | INFO     | [job] validate thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:39,236 | INFO     | [payload] control thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:39,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:47:28] 2025-06-03 21:45:39,438 | INFO     | [job] control thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:39,479 | INFO     | [data] control thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:39,787 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:39,845 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:40,451 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:43,406 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:47:28] 2025-06-03 21:45:45,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23160349624128)>', '<ExcThread(monitor, started 23160107788032)>']
[2025-06-03 23:47:28] 2025-06-03 21:45:45,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:47:28] 2025-06-03 21:45:45,720 | INFO     | [monitor] control thread has ended
[2025-06-03 23:47:28] 2025-06-03 21:45:50,490 | INFO     | all workflow threads have been joined
[2025-06-03 23:47:28] 2025-06-03 21:45:50,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:47:28] 2025-06-03 21:45:50,491 | INFO     | traces error code: 0
[2025-06-03 23:47:28] 2025-06-03 21:45:50,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:47:28] 2025-06-03 21:45:50,642 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:47:28] 2025-06-03 21:45:50,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:47:28] 2025-06-03 21:45:50,648 [wrapper] pilotpid: 860360
[2025-06-03 23:47:28] 2025-06-03 21:45:50,651 [wrapper] Pilot exit status: 0
[2025-06-03 23:47:28] 2025-06-03 21:45:50,661 [wrapper] pandaids: 6672835613
[2025-06-03 23:47:28] 2025-06-03 21:45:50,715 [wrapper] cleanup supervisor_pilot 1160484 860361
[2025-06-03 23:47:28] 2025-06-03 21:45:50,718 [wrapper] Test setup, not cleaning
[2025-06-03 23:47:28] 2025-06-03 21:45:50,721 [wrapper] apfmon messages muted
[2025-06-03 23:47:28] 2025-06-03 21:45:50,724 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:47:28] 2025-06-03 21:45:50,728 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:47:28]  *** Error codes and diagnostics ***
[2025-06-03 23:47:28]     "exeErrorCode": 0,
[2025-06-03 23:47:28]     "exeErrorDiag": "",
[2025-06-03 23:47:28]     "pilotErrorCode": 0,
[2025-06-03 23:47:28]     "pilotErrorDiag": "",
[2025-06-03 23:47:28]  *** Listing of results directory ***
[2025-06-03 23:47:28] total 423124
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc    495897 May 29 21:02 pilot3.tar.gz
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc      5111 May 29 21:19 queuedata.json
[2025-06-03 23:47:28] -rwx------ 1 boinc boinc     37140 May 29 21:19 runpilot2-wrapper.sh
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc       100 Jun  3 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:47:28] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 19:03 run_atlas
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc       105 Jun  3 19:03 job.xml
[2025-06-03 23:47:28] -rw-r--r-- 2 boinc boinc 228166879 Jun  3 19:03 EVNT.44871834._003819.pool.root.1
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc      6422 Jun  3 19:03 init_data.xml
[2025-06-03 23:47:28] -rw-r--r-- 2 boinc boinc    508881 Jun  3 19:03 input.tar.gz
[2025-06-03 23:47:28] drwxrwx--x 2 boinc boinc      4096 Jun  3 19:03 shared
[2025-06-03 23:47:28] -rw-r--r-- 2 boinc boinc     15093 Jun  3 19:03 start_atlas.sh
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc         0 Jun  3 19:03 boinc_lockfile
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc      2558 Jun  3 19:03 pandaJob.out
[2025-06-03 23:47:28] -rw------- 1 boinc boinc    983734 Jun  3 19:03 agis_schedconf.cvmfs.json
[2025-06-03 23:47:28] drwx------ 4 boinc boinc      4096 Jun  3 19:03 pilot3
[2025-06-03 23:47:28] -rw------- 1 boinc boinc 197445652 Jun  3 23:44 HITS.44871837._101317.pool.root.1
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc       528 Jun  3 23:45 boinc_task_state.xml
[2025-06-03 23:47:28] -rw------- 1 boinc boinc      1038 Jun  3 23:45 memory_monitor_summary.json
[2025-06-03 23:47:28] -rw------- 1 boinc boinc   1603667 Jun  3 23:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:47:28] -rw------- 1 boinc boinc    359147 Jun  3 23:45 log.44871837._101317.job.log.tgz.1
[2025-06-03 23:47:28] -rw------- 1 boinc boinc        95 Jun  3 23:45 pilot_heartbeat.json
[2025-06-03 23:47:28] -rw------- 1 boinc boinc      7730 Jun  3 23:45 heartbeat.json
[2025-06-03 23:47:28] -rw------- 1 boinc boinc      4364 Jun  3 23:45 pilotlog.txt
[2025-06-03 23:47:28] -rw------- 1 boinc boinc   1555198 Jun  3 23:45 log.44871837._101317.job.log.1
[2025-06-03 23:47:28] -rw------- 1 boinc boinc       357 Jun  3 23:45 output.list
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc       620 Jun  3 23:45 runtime_log
[2025-06-03 23:47:28] -rw------- 1 boinc boinc   1935360 Jun  3 23:45 result.tar.gz
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc      9026 Jun  3 23:45 runtime_log.err
[2025-06-03 23:47:28] -rw------- 1 boinc boinc       665 Jun  3 23:45 hSpLDmOyxe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8geKDmcXYHun.diag
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc        26 Jun  3 23:47 wrapper_checkpoint.txt
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc      8192 Jun  3 23:47 boinc_mmap_file
[2025-06-03 23:47:28] -rw-r--r-- 1 boinc boinc     21011 Jun  3 23:47 stderr.txt
[2025-06-03 23:47:28] HITS file was successfully produced:
[2025-06-03 23:47:28] -rw------- 1 boinc boinc 197445652 Jun  3 23:44 shared/HITS.pool.root.1
[2025-06-03 23:47:28]  *** Contents of shared directory: ***
[2025-06-03 23:47:28] total 418056
[2025-06-03 23:47:28] -rw-r--r-- 2 boinc boinc 228166879 Jun  3 19:03 ATLAS.root_0
[2025-06-03 23:47:28] -rw-r--r-- 2 boinc boinc    508881 Jun  3 19:03 input.tar.gz
[2025-06-03 23:47:28] -rw-r--r-- 2 boinc boinc     15093 Jun  3 19:03 start_atlas.sh
[2025-06-03 23:47:28] -rw------- 1 boinc boinc 197445652 Jun  3 23:44 HITS.pool.root.1
[2025-06-03 23:47:28] -rw------- 1 boinc boinc   1935360 Jun  3 23:45 result.tar.gz
23:47:30 (856007): run_atlas exited; CPU time 65415.163671
23:47:30 (856007): called boinc_finish(0)

</stderr_txt>
]]>

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