Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:30:06 (1079249): wrapper (7.7.26015): starting
23:30:06 (1079249): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 23:30:06] Arguments: --nthreads 4
[2025-06-04 23:30:06] Threads: 4
[2025-06-04 23:30:06] Checking for CVMFS
[2025-06-04 23:30:06] No cvmfs_config command found, will try listing directly
[2025-06-04 23:30:06] CVMFS is ok
[2025-06-04 23:30:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:30:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:30:06] Further information can be found at the LHC@home message board.
[2025-06-04 23:30:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:30:06] Checking for apptainer binary...
[2025-06-04 23:30:06] which: no apptainer in ((null))
[2025-06-04 23:30:06] apptainer is not installed, using version from CVMFS
[2025-06-04 23:30:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:30:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-04 23:30:06] apptainer works
[2025-06-04 23:30:06] Set ATHENA_PROC_NUMBER=4
[2025-06-04 23:30:06] Set ATHENA_CORE_NUMBER=4
[2025-06-04 23:30:06] Starting ATLAS job with PandaID=6672724743
[2025-06-04 23:30:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:30:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:30:54] 2025-06-05 01:25:31,554 | INFO     | monitor loop #1024: job 0:6672724743 is in state 'finished'
[2025-06-05 03:30:54] 2025-06-05 01:25:31,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:30:54] 2025-06-05 01:25:34,057 | INFO     | monitor loop #1025: job 0:6672724743 is in state 'finished'
[2025-06-05 03:30:54] 2025-06-05 01:25:34,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:30:54] 2025-06-05 01:25:36,560 | INFO     | monitor loop #1026: job 0:6672724743 is in state 'finished'
[2025-06-05 03:30:54] 2025-06-05 01:25:36,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,391 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 03:30:54] 2025-06-05 01:25:38,392 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6672724743/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,393 | INFO     | extracted standard info from prmon json
[2025-06-05 03:30:54] 2025-06-05 01:25:38,393 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:30:54] 2025-06-05 01:25:38,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:30:54] 2025-06-05 01:25:38,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:30:54] 2025-06-05 01:25:38,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:30:54] 2025-06-05 01:25:38,400 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:30:54] 2025-06-05 01:25:38,401 | INFO     | sum of square deviations: 3822136780.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,403 | INFO     | sum of deviations: -32000632329.999996
[2025-06-05 03:30:54] 2025-06-05 01:25:38,403 | INFO     | mean x: 1749079664.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,403 | INFO     | mean y: 2359340.3463203465
[2025-06-05 03:30:54] 2025-06-05 01:25:38,403 | INFO     | -- intersect: 14646433706.398685
[2025-06-05 03:30:54] 2025-06-05 01:25:38,403 | INFO     | intersect: 14646433706.398685
[2025-06-05 03:30:54] 2025-06-05 01:25:38,404 | INFO     | chi2: 1.877069863587729
[2025-06-05 03:30:54] 2025-06-05 01:25:38,404 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 03:30:54] 2025-06-05 01:25:38,406 | INFO     | sum of deviations: -31071922976.500004
[2025-06-05 03:30:54] 2025-06-05 01:25:38,406 | INFO     | mean x: 1749079511.5
[2025-06-05 03:30:54] 2025-06-05 01:25:38,406 | INFO     | mean y: 2359923.579646018
[2025-06-05 03:30:54] 2025-06-05 01:25:38,406 | INFO     | -- intersect: 15186228839.45993
[2025-06-05 03:30:54] 2025-06-05 01:25:38,406 | INFO     | intersect: 15186228839.45993
[2025-06-05 03:30:54] 2025-06-05 01:25:38,406 | INFO     | chi2: 1.8740940408907814
[2025-06-05 03:30:54] 2025-06-05 01:25:38,407 | INFO     | current chi2=1.8740940408907814 (change=0.1585355321436892 %)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,407 | INFO     | right removable region: 225
[2025-06-05 03:30:54] 2025-06-05 01:25:38,407 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 03:30:54] 2025-06-05 01:25:38,409 | INFO     | sum of deviations: -64052040602.49999
[2025-06-05 03:30:54] 2025-06-05 01:25:38,409 | INFO     | mean x: 1749079816.5
[2025-06-05 03:30:54] 2025-06-05 01:25:38,409 | INFO     | mean y: 2379246.6592920353
[2025-06-05 03:30:54] 2025-06-05 01:25:38,409 | INFO     | -- intersect: 31302597087.39898
[2025-06-05 03:30:54] 2025-06-05 01:25:38,409 | INFO     | intersect: 31302597087.39898
[2025-06-05 03:30:54] 2025-06-05 01:25:38,409 | INFO     | chi2: 0.3794815300093591
[2025-06-05 03:30:54] 2025-06-05 01:25:38,410 | INFO     | current chi2=0.3794815300093591 (change=79.78330282901464 %)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,410 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,411 | INFO     | sum of deviations: -54677097704.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,411 | INFO     | mean x: 1749079969.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,412 | INFO     | mean y: 2373080.2398190047
[2025-06-05 03:30:54] 2025-06-05 01:25:38,412 | INFO     | -- intersect: 28576223510.163273
[2025-06-05 03:30:54] 2025-06-05 01:25:38,412 | INFO     | intersect: 28576223510.163273
[2025-06-05 03:30:54] 2025-06-05 01:25:38,412 | INFO     | chi2: 0.35802185208768145
[2025-06-05 03:30:54] 2025-06-05 01:25:38,412 | INFO     | current chi2=0.35802185208768145 (change=5.654999314762006 %)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,412 | INFO     | left removable region: 20
[2025-06-05 03:30:54] 2025-06-05 01:25:38,413 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,414 | INFO     | sum of deviations: -31033435057.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,414 | INFO     | mean x: 1749080091.0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,414 | INFO     | mean y: 2357800.6829268294
[2025-06-05 03:30:54] 2025-06-05 01:25:38,414 | INFO     | -- intersect: 20321710717.32872
[2025-06-05 03:30:54] 2025-06-05 01:25:38,414 | INFO     | intersect: 20321710717.32872
[2025-06-05 03:30:54] 2025-06-05 01:25:38,415 | INFO     | chi2: 0.2530795062356459
[2025-06-05 03:30:54] 2025-06-05 01:25:38,415 | INFO     | -- intersect: 20321710717.32872
[2025-06-05 03:30:54] 2025-06-05 01:25:38,415 | INFO     | current memory leak: -11.62 B/s (using 205 data points, chi2=0.25)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | ..............................
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . Timing measurements:
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . get job = 0 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . initial setup = 1 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . payload setup = 8 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . stage-in = 0 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . payload execution = 14081 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . stage-out = 1 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,416 | INFO     | . log creation = 0 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,417 | INFO     | ..............................
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | 
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | job summary report
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | --------------------------------------------------
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | PanDA job id: 6672724743
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | task id: 44871837
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | errors: (none)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | pilot state: finished 
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | transexitcode: 0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,521 | INFO     | exeerrorcode: 0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | exeerrordiag: 
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | exitcode: 0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | exitmsg: OK
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | cpuconsumptiontime: 54543 s
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | nevents: 400
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | neventsw: 0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | pid: 1090478
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | pgrp: 1090478
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | corecount: 4
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | event service: False
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | sizes: {0: 2397353, 1: 2397381, 6: 2397587, 11: 2397615, 14093: 2427693, 14094: 2427692, 14095: 2436839, 14098: 2436895, 14105: 2437065}
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | --------------------------------------------------
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | 
[2025-06-05 03:30:54] 2025-06-05 01:25:38,522 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-05 03:30:54] 2025-06-05 01:25:38,544 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,544 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | job 6672724743 has completed (purged errors)
[2025-06-05 03:30:54] 2025-06-05 01:25:38,546 | INFO     | overall cleanup function is called
[2025-06-05 03:30:54] 2025-06-05 01:25:39,555 | INFO     | --- collectZombieJob: --- 10, [1090478]
[2025-06-05 03:30:54] 2025-06-05 01:25:39,555 | INFO     | zombie collector waiting for pid 1090478
[2025-06-05 03:30:54] 2025-06-05 01:25:39,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:30:54] 2025-06-05 01:25:39,555 | INFO     | collected zombie processes
[2025-06-05 03:30:54] 2025-06-05 01:25:39,555 | INFO     | will attempt to kill all subprocesses of pid=1090478
[2025-06-05 03:30:54] 2025-06-05 01:25:39,769 | INFO     | process IDs to be killed: [1090478] (in reverse order)
[2025-06-05 03:30:54] 2025-06-05 01:25:39,868 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:30:54] 2025-06-05 01:25:39,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:30:54] 2025-06-05 01:25:39,879 | INFO     | did not find any defunct processes belonging to 1090478
[2025-06-05 03:30:54] 2025-06-05 01:25:39,890 | INFO     | did not find any defunct processes belonging to 1090478
[2025-06-05 03:30:54] 2025-06-05 01:25:39,890 | INFO     | ready for new job
[2025-06-05 03:30:54] 2025-06-05 01:25:39,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:30:54] 2025-06-05 01:25:39,892 | INFO     | **************************************
[2025-06-05 03:30:54] 2025-06-05 01:25:39,893 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:30:54] 2025-06-05 01:25:39,893 | INFO     | **************************************
[2025-06-05 03:30:54] 2025-06-05 01:25:39,893 | INFO     | 
[2025-06-05 03:30:54] 2025-06-05 01:25:39,896 | INFO     | architecture information:
[2025-06-05 03:30:54] 2025-06-05 01:25:39,897 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:30:54] 2025-06-05 01:25:39,914 | INFO     | cat /etc/os-release:
[2025-06-05 03:30:54] NAME="CentOS Linux"
[2025-06-05 03:30:54] VERSION="7 (Core)"
[2025-06-05 03:30:54] ID="centos"
[2025-06-05 03:30:54] ID_LIKE="rhel fedora"
[2025-06-05 03:30:54] VERSION_ID="7"
[2025-06-05 03:30:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:30:54] ANSI_COLOR="0;31"
[2025-06-05 03:30:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:30:54] HOME_URL="https://www.centos.org/"
[2025-06-05 03:30:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:30:54] 
[2025-06-05 03:30:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:30:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:30:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:30:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:30:54] 
[2025-06-05 03:30:54] 2025-06-05 01:25:39,914 | INFO     | **************************************
[2025-06-05 03:30:54] 2025-06-05 01:25:40,416 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-05 03:30:54] 2025-06-05 01:25:40,435 | INFO     | sufficient remaining disk space (663047110656 B)
[2025-06-05 03:30:54] 2025-06-05 01:25:40,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:30:54] 2025-06-05 01:25:40,436 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:30:54] 2025-06-05 01:25:40,436 | INFO     | update_server=False
[2025-06-05 03:30:54] 2025-06-05 01:25:40,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:30:54] 2025-06-05 01:25:40,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:30:54] 2025-06-05 01:25:40,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:30:54] 2025-06-05 01:25:40,437 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:30:54] 2025-06-05 01:25:40,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:30:54] 2025-06-05 01:25:40,438 | INFO     | aborting loop
[2025-06-05 03:30:54] 2025-06-05 01:25:40,438 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:30:54] 2025-06-05 01:25:40,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:30:54] 2025-06-05 01:25:40,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:30:54] 2025-06-05 01:25:40,729 | INFO     | all job control threads have been joined
[2025-06-05 03:30:54] 2025-06-05 01:25:41,163 | INFO     | all data control threads have been joined
[2025-06-05 03:30:54] 2025-06-05 01:25:41,442 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,443 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,443 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,448 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,454 | INFO     | [job] validate thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,472 | INFO     | all payload control threads have been joined
[2025-06-05 03:30:54] 2025-06-05 01:25:41,509 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,567 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,733 | INFO     | [job] control thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,851 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:41,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:30:54] 2025-06-05 01:25:42,169 | INFO     | [data] control thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:42,444 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:42,478 | INFO     | [payload] control thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:42,550 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:42,809 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:45,968 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:50,942 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:30:54] 2025-06-05 01:25:51,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:30:54] 2025-06-05 01:25:52,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22558826387264)>', '<ExcThread(monitor, started 22557837223680)>']
[2025-06-05 03:30:54] 2025-06-05 01:25:52,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:30:54] 2025-06-05 01:25:52,490 | INFO     | [monitor] control thread has ended
[2025-06-05 03:30:54] 2025-06-05 01:25:57,317 | INFO     | all workflow threads have been joined
[2025-06-05 03:30:54] 2025-06-05 01:25:57,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:30:54] 2025-06-05 01:25:57,317 | INFO     | traces error code: 0
[2025-06-05 03:30:54] 2025-06-05 01:25:57,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:30:54] 2025-06-05 01:25:57,465 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:30:54] 2025-06-05 01:25:57,468 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:30:54] 2025-06-05 01:25:57,471 [wrapper] pilotpid: 1083240
[2025-06-05 03:30:54] 2025-06-05 01:25:57,474 [wrapper] Pilot exit status: 0
[2025-06-05 03:30:54] 2025-06-05 01:25:57,486 [wrapper] pandaids: 6672724743
[2025-06-05 03:30:54] 2025-06-05 01:25:57,553 [wrapper] cleanup supervisor_pilot 1486860 1083241
[2025-06-05 03:30:54] 2025-06-05 01:25:57,557 [wrapper] Test setup, not cleaning
[2025-06-05 03:30:54] 2025-06-05 01:25:57,560 [wrapper] apfmon messages muted
[2025-06-05 03:30:54] 2025-06-05 01:25:57,564 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:30:54] 2025-06-05 01:25:57,567 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:30:54]  *** Error codes and diagnostics ***
[2025-06-05 03:30:54]     "exeErrorCode": 0,
[2025-06-05 03:30:54]     "exeErrorDiag": "",
[2025-06-05 03:30:54]     "pilotErrorCode": 0,
[2025-06-05 03:30:54]     "pilotErrorDiag": "",
[2025-06-05 03:30:54]  *** Listing of results directory ***
[2025-06-05 03:30:54] total 416612
[2025-06-05 03:30:54] -rwx------ 1 boinc boinc     37140 May 29 19:20 runpilot2-wrapper.sh
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc      5111 May 29 19:20 queuedata.json
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc    495897 May 29 19:20 pilot3.tar.gz
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:30:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:28 run_atlas
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:28 job.xml
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc      6636 Jun  4 23:30 init_data.xml
[2025-06-05 03:30:54] -rw-r--r-- 2 boinc boinc 223346305 Jun  4 23:30 EVNT.44871834._003373.pool.root.1
[2025-06-05 03:30:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:30 start_atlas.sh
[2025-06-05 03:30:54] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:30 shared
[2025-06-05 03:30:54] -rw-r--r-- 2 boinc boinc    508881 Jun  4 23:30 input.tar.gz
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:30 boinc_lockfile
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc      2559 Jun  4 23:30 pandaJob.out
[2025-06-05 03:30:54] -rw------- 1 boinc boinc    987032 Jun  4 23:30 agis_schedconf.cvmfs.json
[2025-06-05 03:30:54] drwx------ 4 boinc boinc      4096 Jun  4 23:30 pilot3
[2025-06-05 03:30:54] -rw------- 1 boinc boinc 196114083 Jun  5 03:24 HITS.44871837._101221.pool.root.1
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc       528 Jun  5 03:24 boinc_task_state.xml
[2025-06-05 03:30:54] -rw------- 1 boinc boinc      1035 Jun  5 03:25 memory_monitor_summary.json
[2025-06-05 03:30:54] -rw------- 1 boinc boinc   1598969 Jun  5 03:25 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:30:54] -rw------- 1 boinc boinc    349644 Jun  5 03:25 log.44871837._101221.job.log.tgz.1
[2025-06-05 03:30:54] -rw------- 1 boinc boinc        95 Jun  5 03:25 pilot_heartbeat.json
[2025-06-05 03:30:54] -rw------- 1 boinc boinc      7727 Jun  5 03:25 heartbeat.json
[2025-06-05 03:30:54] -rw------- 1 boinc boinc      4558 Jun  5 03:25 pilotlog.txt
[2025-06-05 03:30:54] -rw------- 1 boinc boinc   1308302 Jun  5 03:25 log.44871837._101221.job.log.1
[2025-06-05 03:30:54] -rw------- 1 boinc boinc       357 Jun  5 03:25 output.list
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:25 runtime_log
[2025-06-05 03:30:54] -rw------- 1 boinc boinc   1679360 Jun  5 03:25 result.tar.gz
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc      9026 Jun  5 03:25 runtime_log.err
[2025-06-05 03:30:54] -rw------- 1 boinc boinc       665 Jun  5 03:25 8NtNDmp6ve7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6LVKDm0WwCNo.diag
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc        26 Jun  5 03:30 wrapper_checkpoint.txt
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:30 boinc_mmap_file
[2025-06-05 03:30:54] -rw-r--r-- 1 boinc boinc     20892 Jun  5 03:30 stderr.txt
[2025-06-05 03:30:54] HITS file was successfully produced:
[2025-06-05 03:30:54] -rw------- 1 boinc boinc 196114083 Jun  5 03:24 shared/HITS.pool.root.1
[2025-06-05 03:30:54]  *** Contents of shared directory: ***
[2025-06-05 03:30:54] total 411796
[2025-06-05 03:30:54] -rw-r--r-- 2 boinc boinc 223346305 Jun  4 23:30 ATLAS.root_0
[2025-06-05 03:30:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:30 start_atlas.sh
[2025-06-05 03:30:54] -rw-r--r-- 2 boinc boinc    508881 Jun  4 23:30 input.tar.gz
[2025-06-05 03:30:54] -rw------- 1 boinc boinc 196114083 Jun  5 03:24 HITS.pool.root.1
[2025-06-05 03:30:54] -rw------- 1 boinc boinc   1679360 Jun  5 03:25 result.tar.gz
03:30:56 (1079249): run_atlas exited; CPU time 55118.366326
03:30:56 (1079249): called boinc_finish(0)

</stderr_txt>
]]>

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