Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:53:07 (3316132): wrapper (7.7.26015): starting
18:53:07 (3316132): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 18:53:07] Arguments: --nthreads 12
[2025-05-29 18:53:07] Threads: 12
[2025-05-29 18:53:07] Checking for CVMFS
[2025-05-29 18:53:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 18:53:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 18:53:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 18:53:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 18:53:07] 2.12.6.0 8433 23486 418772 146579 3 367 22712031 40960001 11216 16776704 1 69836756 99.590 77144901 24185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-29 18:53:07] CVMFS is ok
[2025-05-29 18:53:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 18:53:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 18:53:07] Further information can be found at the LHC@home message board.
[2025-05-29 18:53:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 18:53:07] Checking for apptainer binary...
[2025-05-29 18:53:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 18:53:07] Running /usr/bin/apptainer --version
[2025-05-29 18:53:07] apptainer version 1.4.1-1.el9
[2025-05-29 18:53:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 18:53:07] c6-5-7-1.aglt2.org
[2025-05-29 18:53:07] apptainer works
[2025-05-29 18:53:07] Set ATHENA_PROC_NUMBER=12
[2025-05-29 18:53:07] Set ATHENA_CORE_NUMBER=12
[2025-05-29 18:53:07] Starting ATLAS job with PandaID=6672666009
[2025-05-29 18:53:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 20:45:34]  *** The last 200 lines of the pilot log: ***
[2025-05-29 20:45:34] 2025-05-30 00:45:21,554 | INFO     | fitting pss+swap vs Time
[2025-05-29 20:45:34] 2025-05-30 00:45:21,554 | INFO     | sum of square deviations: 412678575.41818243
[2025-05-29 20:45:34] 2025-05-30 00:45:21,555 | INFO     | sum of deviations: 4291511477.400004
[2025-05-29 20:45:34] 2025-05-30 00:45:21,555 | INFO     | mean x: 1748562550.5272727
[2025-05-29 20:45:34] 2025-05-30 00:45:21,556 | INFO     | mean y: 2388227.2
[2025-05-29 20:45:34] 2025-05-30 00:45:21,556 | INFO     | -- intersect: -18181197501.56132
[2025-05-29 20:45:34] 2025-05-30 00:45:21,556 | INFO     | intersect: -18181197501.56132
[2025-05-29 20:45:34] 2025-05-30 00:45:21,556 | INFO     | chi2: 2.01480657422069
[2025-05-29 20:45:34] 2025-05-30 00:45:21,556 | INFO     | sum of square deviations: 358920342.9142853
[2025-05-29 20:45:34] 2025-05-30 00:45:21,557 | INFO     | sum of deviations: 4993814302.085715
[2025-05-29 20:45:34] 2025-05-30 00:45:21,557 | INFO     | mean x: 1748562398.0285714
[2025-05-29 20:45:34] 2025-05-30 00:45:21,557 | INFO     | mean y: 2390177.9714285713
[2025-05-29 20:45:34] 2025-05-30 00:45:21,557 | INFO     | -- intersect: -24326116366.02707
[2025-05-29 20:45:34] 2025-05-30 00:45:21,557 | INFO     | intersect: -24326116366.02707
[2025-05-29 20:45:34] 2025-05-30 00:45:21,558 | INFO     | chi2: 2.018991802867645
[2025-05-29 20:45:34] 2025-05-30 00:45:21,558 | INFO     | current chi2=2.018991802867645 (change=-0.2077235949348447 %)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,558 | INFO     | right removable region: 104
[2025-05-29 20:45:34] 2025-05-30 00:45:21,558 | INFO     | sum of square deviations: 358918512.9142853
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | sum of deviations: -14316057706.71428
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | mean x: 1748562703.0285714
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | mean y: 2440194.5714285714
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | -- intersect: 69746751673.82756
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | intersect: 69746751673.82756
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | chi2: 0.26553573530114244
[2025-05-29 20:45:34] 2025-05-30 00:45:21,559 | INFO     | current chi2=0.26553573530114244 (change=86.82078276403037 %)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,560 | INFO     | sum of square deviations: 310042262.91
[2025-05-29 20:45:34] 2025-05-30 00:45:21,560 | INFO     | sum of deviations: -14107390948.160004
[2025-05-29 20:45:34] 2025-05-30 00:45:21,561 | INFO     | mean x: 1748562855.53
[2025-05-29 20:45:34] 2025-05-30 00:45:21,561 | INFO     | mean y: 2439207.72
[2025-05-29 20:45:34] 2025-05-30 00:45:21,561 | INFO     | -- intersect: 79564688460.02058
[2025-05-29 20:45:34] 2025-05-30 00:45:21,561 | INFO     | intersect: 79564688460.02058
[2025-05-29 20:45:34] 2025-05-30 00:45:21,561 | INFO     | chi2: 0.18716657036092607
[2025-05-29 20:45:34] 2025-05-30 00:45:21,561 | INFO     | current chi2=0.18716657036092607 (change=29.513603828629087 %)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,562 | INFO     | sum of square deviations: 265817262.90526336
[2025-05-29 20:45:34] 2025-05-30 00:45:21,562 | INFO     | sum of deviations: -8931678559.736843
[2025-05-29 20:45:34] 2025-05-30 00:45:21,562 | INFO     | mean x: 1748563008.031579
[2025-05-29 20:45:34] 2025-05-30 00:45:21,562 | INFO     | mean y: 2421353.5789473685
[2025-05-29 20:45:34] 2025-05-30 00:45:21,562 | INFO     | -- intersect: 58755575902.27615
[2025-05-29 20:45:34] 2025-05-30 00:45:21,563 | INFO     | intersect: 58755575902.27615
[2025-05-29 20:45:34] 2025-05-30 00:45:21,563 | INFO     | chi2: 0.14908175400971282
[2025-05-29 20:45:34] 2025-05-30 00:45:21,563 | INFO     | current chi2=0.14908175400971282 (change=20.348086882060027 %)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,563 | INFO     | left removable region: 30
[2025-05-29 20:45:34] 2025-05-30 00:45:21,563 | INFO     | sum of square deviations: 125623676.44594589
[2025-05-29 20:45:34] 2025-05-30 00:45:21,564 | INFO     | sum of deviations: -876311780.7432435
[2025-05-29 20:45:34] 2025-05-30 00:45:21,564 | INFO     | mean x: 1748563282.5270271
[2025-05-29 20:45:34] 2025-05-30 00:45:21,564 | INFO     | mean y: 2395027.121621622
[2025-05-29 20:45:34] 2025-05-30 00:45:21,564 | INFO     | -- intersect: 12199829835.621529
[2025-05-29 20:45:34] 2025-05-30 00:45:21,564 | INFO     | intersect: 12199829835.621529
[2025-05-29 20:45:34] 2025-05-30 00:45:21,564 | INFO     | chi2: 0.007632478952005052
[2025-05-29 20:45:34] 2025-05-30 00:45:21,565 | INFO     | -- intersect: 12199829835.621529
[2025-05-29 20:45:34] 2025-05-30 00:45:21,565 | INFO     | current memory leak: -6.98 B/s (using 74 data points, chi2=0.01)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | ..............................
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . Timing measurements:
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . get job = 0 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . initial setup = 2 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . payload setup = 7 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . stage-in = 0 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . payload execution = 6692 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . stage-out = 0 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | . log creation = 0 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,566 | INFO     | ..............................
[2025-05-29 20:45:34] 2025-05-30 00:45:21,884 | INFO     | 
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | job summary report
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | --------------------------------------------------
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | PanDA job id: 6672666009
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | task id: 44871837
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | errors: (none)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | pilot state: finished 
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | transexitcode: 0
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | exeerrorcode: 0
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | exeerrordiag: 
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | exitcode: 0
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | exitmsg: OK
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | cpuconsumptiontime: 54247 s
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | nevents: 400
[2025-05-29 20:45:34] 2025-05-30 00:45:21,885 | INFO     | neventsw: 0
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | pid: 3329485
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | pgrp: 3329485
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | corecount: 12
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | event service: False
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | sizes: {0: 2405069, 1: 2405211, 5: 2405417, 11: 2405473, 6702: 2432405, 6703: 2432404, 6704: 2441585, 6708: 2441699}
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | --------------------------------------------------
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | 
[2025-05-29 20:45:34] 2025-05-30 00:45:21,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-29 20:45:34] 2025-05-30 00:45:21,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 20:45:34] 2025-05-30 00:45:21,910 | INFO     | job 6672666009 has completed (purged errors)
[2025-05-29 20:45:34] 2025-05-30 00:45:21,910 | INFO     | overall cleanup function is called
[2025-05-29 20:45:34] 2025-05-30 00:45:22,285 | WARNING  | process 3329485 can no longer be monitored (due to stat problems) - aborting
[2025-05-29 20:45:34] 2025-05-30 00:45:22,610 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 20:45:34] 2025-05-30 00:45:22,611 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 20:45:34] 2025-05-30 00:45:22,918 | INFO     | --- collectZombieJob: --- 10, [3329485]
[2025-05-29 20:45:34] 2025-05-30 00:45:22,919 | INFO     | zombie collector waiting for pid 3329485
[2025-05-29 20:45:34] 2025-05-30 00:45:22,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 20:45:34] 2025-05-30 00:45:22,919 | INFO     | collected zombie processes
[2025-05-29 20:45:34] 2025-05-30 00:45:22,919 | INFO     | will attempt to kill all subprocesses of pid=3329485
[2025-05-29 20:45:34] 2025-05-30 00:45:22,921 | INFO     | number of running child processes to parent process 3329485: 1
[2025-05-29 20:45:34] 2025-05-30 00:45:22,921 | INFO     | maximum number of monitored processes: 6
[2025-05-29 20:45:34] 2025-05-30 00:45:22,921 | INFO     | aborting job monitoring since job object (job id=6672666009) has expired
[2025-05-29 20:45:34] 2025-05-30 00:45:23,179 | INFO     | process IDs to be killed: [3329485] (in reverse order)
[2025-05-29 20:45:34] 2025-05-30 00:45:23,278 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 20:45:34] 2025-05-30 00:45:23,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 20:45:34] 2025-05-30 00:45:23,294 | INFO     | did not find any defunct processes belonging to 3329485
[2025-05-29 20:45:34] 2025-05-30 00:45:23,309 | INFO     | did not find any defunct processes belonging to 3329485
[2025-05-29 20:45:34] 2025-05-30 00:45:23,310 | INFO     | ready for new job
[2025-05-29 20:45:34] 2025-05-30 00:45:23,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 20:45:34] 2025-05-30 00:45:23,312 | INFO     | **************************************
[2025-05-29 20:45:34] 2025-05-30 00:45:23,313 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 20:45:34] 2025-05-30 00:45:23,313 | INFO     | **************************************
[2025-05-29 20:45:34] 2025-05-30 00:45:23,313 | INFO     | 
[2025-05-29 20:45:34] 2025-05-30 00:45:23,328 | INFO     | architecture information:
[2025-05-29 20:45:34] 2025-05-30 00:45:23,329 | INFO     | executing command: cat /etc/os-release
[2025-05-29 20:45:34] 2025-05-30 00:45:23,345 | INFO     | cat /etc/os-release:
[2025-05-29 20:45:34] NAME="CentOS Linux"
[2025-05-29 20:45:34] VERSION="7 (Core)"
[2025-05-29 20:45:34] ID="centos"
[2025-05-29 20:45:34] ID_LIKE="rhel fedora"
[2025-05-29 20:45:34] VERSION_ID="7"
[2025-05-29 20:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 20:45:34] ANSI_COLOR="0;31"
[2025-05-29 20:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 20:45:34] HOME_URL="https://www.centos.org/"
[2025-05-29 20:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 20:45:34] 
[2025-05-29 20:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 20:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 20:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 20:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 20:45:34] 
[2025-05-29 20:45:34] 2025-05-30 00:45:23,345 | INFO     | **************************************
[2025-05-29 20:45:34] 2025-05-30 00:45:23,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-29 20:45:34] 2025-05-30 00:45:23,865 | INFO     | sufficient remaining disk space (75517394944 B)
[2025-05-29 20:45:34] 2025-05-30 00:45:23,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 20:45:34] 2025-05-30 00:45:23,866 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 20:45:34] 2025-05-30 00:45:23,866 | INFO     | update_server=False
[2025-05-29 20:45:34] 2025-05-30 00:45:23,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 20:45:34] 2025-05-30 00:45:23,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 20:45:34] 2025-05-30 00:45:23,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 20:45:34] 2025-05-30 00:45:23,867 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 20:45:34] 2025-05-30 00:45:23,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 20:45:34] 2025-05-30 00:45:23,867 | INFO     | will abort loop
[2025-05-29 20:45:34] 2025-05-30 00:45:23,868 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 20:45:34] 2025-05-30 00:45:23,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 20:45:34] 2025-05-30 00:45:23,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 20:45:34] 2025-05-30 00:45:24,541 | INFO     | all data control threads have been joined
[2025-05-29 20:45:34] 2025-05-30 00:45:24,706 | INFO     | all payload control threads have been joined
[2025-05-29 20:45:34] 2025-05-30 00:45:24,869 | INFO     | [job] retrieve thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:24,873 | INFO     | [job] job monitor thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,019 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,150 | INFO     | all job control threads have been joined
[2025-05-29 20:45:34] 2025-05-30 00:45:25,338 | INFO     | [payload] failed_post thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,547 | INFO     | [data] control thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,608 | INFO     | [payload] validate_post thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,611 | INFO     | [job] validate thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,711 | INFO     | [payload] control thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:25,873 | INFO     | [data] copytool_out thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:26,156 | INFO     | [job] control thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:26,181 | INFO     | [data] copytool_in thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:26,216 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:26,301 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:26,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 20:45:34] 2025-05-30 00:45:27,668 | INFO     | [job] queue monitor thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:27,874 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 20:45:34] 2025-05-30 00:45:29,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127720789824)>', '<ExcThread(monitor, started 140126931908352)>']
[2025-05-29 20:45:34] 2025-05-30 00:45:29,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 20:45:34] 2025-05-30 00:45:29,895 | INFO     | [monitor] control thread has ended
[2025-05-29 20:45:34] 2025-05-30 00:45:34,598 | INFO     | all workflow threads have been joined
[2025-05-29 20:45:34] 2025-05-30 00:45:34,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 20:45:34] 2025-05-30 00:45:34,599 | INFO     | traces error code: 0
[2025-05-29 20:45:34] 2025-05-30 00:45:34,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 20:45:34] 2025-05-30 00:45:34,781 [wrapper] ==== pilot stdout END ====
[2025-05-29 20:45:34] 2025-05-30 00:45:34,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 20:45:34] 2025-05-30 00:45:34,788 [wrapper] pilotpid: 3321700
[2025-05-29 20:45:34] 2025-05-30 00:45:34,791 [wrapper] Pilot exit status: 0
[2025-05-29 20:45:34] 2025-05-30 00:45:34,802 [wrapper] pandaids: 6672666009
[2025-05-29 20:45:34] 2025-05-30 00:45:34,861 [wrapper] cleanup supervisor_pilot 3838913 3321701
[2025-05-29 20:45:34] 2025-05-30 00:45:34,863 [wrapper] Test setup, not cleaning
[2025-05-29 20:45:34] 2025-05-30 00:45:34,866 [wrapper] apfmon messages muted
[2025-05-29 20:45:34] 2025-05-30 00:45:34,868 [wrapper] ==== wrapper stdout END ====
[2025-05-29 20:45:34] 2025-05-30 00:45:34,871 [wrapper] ==== wrapper stderr END ====
[2025-05-29 20:45:34]  *** Error codes and diagnostics ***
[2025-05-29 20:45:34]     "exeErrorCode": 0,
[2025-05-29 20:45:34]     "exeErrorDiag": "",
[2025-05-29 20:45:34]     "pilotErrorCode": 0,
[2025-05-29 20:45:34]     "pilotErrorDiag": "",
[2025-05-29 20:45:34]  *** Listing of results directory ***
[2025-05-29 20:45:34] total 422128
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas    495897 May 29 12:18 pilot3.tar.gz
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas      5111 May 29 12:23 queuedata.json
[2025-05-29 20:45:34] -rwx------. 1 boincer umatlas     37140 May 29 12:26 runpilot2-wrapper.sh
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas       100 May 29 18:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 20:45:34] -rwxr-xr-x. 1 boincer umatlas      7986 May 29 18:53 run_atlas
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas       105 May 29 18:53 job.xml
[2025-05-29 20:45:34] -rw-r--r--. 2 boincer umatlas 225979443 May 29 18:53 EVNT.44871834._003688.pool.root.1
[2025-05-29 20:45:34] -rw-r--r--. 2 boincer umatlas     15093 May 29 18:53 start_atlas.sh
[2025-05-29 20:45:34] drwxrwx--x. 2 boincer umatlas      4096 May 29 18:53 shared
[2025-05-29 20:45:34] -rw-r--r--. 2 boincer umatlas    508886 May 29 18:53 input.tar.gz
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas         0 May 29 18:53 boinc_lockfile
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas      2558 May 29 18:53 pandaJob.out
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas    992366 May 29 18:53 agis_schedconf.cvmfs.json
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas   1603667 May 29 18:53 agis_ddmendpoints.agis.ALL.json
[2025-05-29 20:45:34] drwx------. 4 boincer umatlas      4096 May 29 18:53 pilot3
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas      6839 May 29 20:36 init_data.xml
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas        95 May 29 20:44 pilot_heartbeat.json
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas 200445208 May 29 20:44 HITS.44871837._101207.pool.root.1
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas       529 May 29 20:44 boinc_task_state.xml
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas      1048 May 29 20:45 memory_monitor_summary.json
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas      8192 May 29 20:45 boinc_mmap_file
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas        27 May 29 20:45 wrapper_checkpoint.txt
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas    374736 May 29 20:45 log.44871837._101207.job.log.tgz.1
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas      7727 May 29 20:45 heartbeat.json
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas      4478 May 29 20:45 pilotlog.txt
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas    625032 May 29 20:45 log.44871837._101207.job.log.1
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas       357 May 29 20:45 output.list
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas       620 May 29 20:45 runtime_log
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas   1013760 May 29 20:45 result.tar.gz
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas       657 May 29 20:45 ZXoKDmsGve7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGgeKDm2JAmFm.diag
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas      8661 May 29 20:45 runtime_log.err
[2025-05-29 20:45:34] -rw-r--r--. 1 boincer umatlas     21027 May 29 20:45 stderr.txt
[2025-05-29 20:45:34] HITS file was successfully produced:
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas 200445208 May 29 20:44 shared/HITS.pool.root.1
[2025-05-29 20:45:34]  *** Contents of shared directory: ***
[2025-05-29 20:45:34] total 417944
[2025-05-29 20:45:34] -rw-r--r--. 2 boincer umatlas 225979443 May 29 18:53 ATLAS.root_0
[2025-05-29 20:45:34] -rw-r--r--. 2 boincer umatlas     15093 May 29 18:53 start_atlas.sh
[2025-05-29 20:45:34] -rw-r--r--. 2 boincer umatlas    508886 May 29 18:53 input.tar.gz
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas 200445208 May 29 20:44 HITS.pool.root.1
[2025-05-29 20:45:34] -rw-------. 1 boincer umatlas   1013760 May 29 20:45 result.tar.gz
20:45:36 (3316132): run_atlas exited; CPU time 54327.609977
20:45:36 (3316132): called boinc_finish(0)

</stderr_txt>
]]>

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