Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:23 (34882): wrapper (7.7.26015): starting
16:48:23 (34882): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 16:48:23] Arguments: --nthreads 8
[2025-05-29 16:48:23] Threads: 8
[2025-05-29 16:48:23] Checking for CVMFS
[2025-05-29 16:48:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 16:48:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 16:48:24] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 16:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 16:48:26] 2.11.2.0 20329 84584 214236 146574 3 165 15892805 18432001 10970 130560 0 194168567 98.774 534673094 37703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-29 16:48:26] CVMFS is ok
[2025-05-29 16:48:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 16:48:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 16:48:26] Further information can be found at the LHC@home message board.
[2025-05-29 16:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 16:48:26] Checking for apptainer binary...
[2025-05-29 16:48:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 16:48:26] Running /usr/bin/apptainer --version
[2025-05-29 16:48:28] apptainer version 1.3.2-1.el7
[2025-05-29 16:48:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 16:48:54] c-211-9.aglt2.org
[2025-05-29 16:48:54] apptainer works
[2025-05-29 16:48:54] Set ATHENA_PROC_NUMBER=8
[2025-05-29 16:48:54] Set ATHENA_CORE_NUMBER=8
[2025-05-29 16:48:55] Starting ATLAS job with PandaID=6670934416
[2025-05-29 16:48:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 02:45:07]  *** The last 200 lines of the pilot log: ***
[2025-05-30 02:45:07] 2025-05-30 06:44:51,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 02:45:07] 2025-05-30 06:44:51,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 02:45:07] 2025-05-30 06:44:51,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 02:45:07] 2025-05-30 06:44:51,446 | INFO     | fitting pss+swap vs Time
[2025-05-30 02:45:07] 2025-05-30 06:44:51,447 | INFO     | sum of square deviations: 60500059495.54988
[2025-05-30 02:45:07] 2025-05-30 06:44:51,458 | INFO     | sum of deviations: 432259144834.1991
[2025-05-30 02:45:07] 2025-05-30 06:44:51,472 | INFO     | monitor loop #2235: job 0:6670934416 is in state 'finished'
[2025-05-30 02:45:07] 2025-05-30 06:44:51,477 | INFO     | mean x: 1748569777.05
[2025-05-30 02:45:07] 2025-05-30 06:44:51,477 | INFO     | mean y: 2442128.544827586
[2025-05-30 02:45:07] 2025-05-30 06:44:51,477 | INFO     | -- intersect: -12490690652.029629
[2025-05-30 02:45:07] 2025-05-30 06:44:51,477 | INFO     | intersect: -12490690652.029629
[2025-05-30 02:45:07] 2025-05-30 06:44:51,478 | INFO     | chi2: 6.399857789425758
[2025-05-30 02:45:07] 2025-05-30 06:44:51,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,479 | INFO     | sum of square deviations: 58948927704.024376
[2025-05-30 02:45:07] 2025-05-30 06:44:51,484 | INFO     | sum of deviations: 468356368955.27905
[2025-05-30 02:45:07] 2025-05-30 06:44:51,485 | INFO     | mean x: 1748569624.5547826
[2025-05-30 02:45:07] 2025-05-30 06:44:51,485 | INFO     | mean y: 2445649.6260869564
[2025-05-30 02:45:07] 2025-05-30 06:44:51,485 | INFO     | -- intersect: -13890151758.317339
[2025-05-30 02:45:07] 2025-05-30 06:44:51,485 | INFO     | intersect: -13890151758.317339
[2025-05-30 02:45:07] 2025-05-30 06:44:51,486 | INFO     | chi2: 5.559106180519958
[2025-05-30 02:45:07] 2025-05-30 06:44:51,486 | INFO     | current chi2=5.559106180519958 (change=13.13703579937263 %)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,486 | INFO     | right removable region: 574
[2025-05-30 02:45:07] 2025-05-30 06:44:51,487 | INFO     | sum of square deviations: 58948733114.024376
[2025-05-30 02:45:07] 2025-05-30 06:44:51,492 | INFO     | sum of deviations: 243795424148.72516
[2025-05-30 02:45:07] 2025-05-30 06:44:51,492 | INFO     | mean x: 1748569929.5547826
[2025-05-30 02:45:07] 2025-05-30 06:44:51,492 | INFO     | mean y: 2460645.8817391302
[2025-05-30 02:45:07] 2025-05-30 06:44:51,493 | INFO     | -- intersect: -7229134082.455113
[2025-05-30 02:45:07] 2025-05-30 06:44:51,493 | INFO     | intersect: -7229134082.455113
[2025-05-30 02:45:07] 2025-05-30 06:44:51,493 | INFO     | chi2: 2.425852992929461
[2025-05-30 02:45:07] 2025-05-30 06:44:51,493 | INFO     | current chi2=2.425852992929461 (change=62.0952047256799 %)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,494 | INFO     | sum of square deviations: 57424186251.0896
[2025-05-30 02:45:07] 2025-05-30 06:44:51,499 | INFO     | sum of deviations: 140817633006.15808
[2025-05-30 02:45:07] 2025-05-30 06:44:51,499 | INFO     | mean x: 1748570082.0578947
[2025-05-30 02:45:07] 2025-05-30 06:44:51,500 | INFO     | mean y: 2470930.298245614
[2025-05-30 02:45:07] 2025-05-30 06:44:51,500 | INFO     | -- intersect: -4285434849.0562553
[2025-05-30 02:45:07] 2025-05-30 06:44:51,500 | INFO     | intersect: -4285434849.0562553
[2025-05-30 02:45:07] 2025-05-30 06:44:51,500 | INFO     | chi2: 1.1859079709954792
[2025-05-30 02:45:07] 2025-05-30 06:44:51,500 | INFO     | current chi2=1.1859079709954792 (change=51.113774229023825 %)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,501 | INFO     | sum of square deviations: 55926151879.14261
[2025-05-30 02:45:07] 2025-05-30 06:44:51,506 | INFO     | sum of deviations: 98112121875.69543
[2025-05-30 02:45:07] 2025-05-30 06:44:51,506 | INFO     | mean x: 1748570234.5610619
[2025-05-30 02:45:07] 2025-05-30 06:44:51,506 | INFO     | mean y: 2475274.2407079646
[2025-05-30 02:45:07] 2025-05-30 06:44:51,507 | INFO     | -- intersect: -3065068803.0311136
[2025-05-30 02:45:07] 2025-05-30 06:44:51,507 | INFO     | intersect: -3065068803.0311136
[2025-05-30 02:45:07] 2025-05-30 06:44:51,507 | INFO     | chi2: 1.0074822308305729
[2025-05-30 02:45:07] 2025-05-30 06:44:51,507 | INFO     | current chi2=1.0074822308305729 (change=15.045496322546134 %)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,507 | INFO     | left removable region: 30
[2025-05-30 02:45:07] 2025-05-30 06:44:51,508 | INFO     | sum of square deviations: 49918826427.601006
[2025-05-30 02:45:07] 2025-05-30 06:44:51,513 | INFO     | sum of deviations: 76922944723.50363
[2025-05-30 02:45:07] 2025-05-30 06:44:51,513 | INFO     | mean x: 1748570509.079044
[2025-05-30 02:45:07] 2025-05-30 06:44:51,513 | INFO     | mean y: 2485463.430147059
[2025-05-30 02:45:07] 2025-05-30 06:44:51,513 | INFO     | -- intersect: -2691992797.394222
[2025-05-30 02:45:07] 2025-05-30 06:44:51,513 | INFO     | intersect: -2691992797.394222
[2025-05-30 02:45:07] 2025-05-30 06:44:51,514 | INFO     | chi2: 0.004677767863469171
[2025-05-30 02:45:07] 2025-05-30 06:44:51,514 | INFO     | -- intersect: -2691992797.394222
[2025-05-30 02:45:07] 2025-05-30 06:44:51,514 | INFO     | current memory leak: 1.54 B/s (using 544 data points, chi2=0.00)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | ..............................
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . Timing measurements:
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . get job = 0 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . initial setup = 11 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . payload setup = 99 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . stage-in = 0 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . payload execution = 35430 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . stage-out = 2 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | . log creation = 0 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,515 | INFO     | ..............................
[2025-05-30 02:45:07] 2025-05-30 06:44:51,594 | INFO     | 
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | job summary report
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | --------------------------------------------------
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | PanDA job id: 6670934416
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | task id: 44871837
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | errors: (none)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 02:45:07] 2025-05-30 06:44:51,595 | INFO     | pilot state: finished 
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | transexitcode: 0
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | exeerrorcode: 0
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | exeerrordiag: 
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | exitcode: 0
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | exitmsg: OK
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | cpuconsumptiontime: 81801 s
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | nevents: 400
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | neventsw: 0
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | pid: 12085
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | pgrp: 12085
[2025-05-30 02:45:07] 2025-05-30 06:44:51,596 | INFO     | corecount: 8
[2025-05-30 02:45:07] 2025-05-30 06:44:51,597 | INFO     | event service: False
[2025-05-30 02:45:07] 2025-05-30 06:44:51,597 | INFO     | sizes: {0: 2404356, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405502, 45: 2405502, 35534: 2445506, 35538: 2454447, 35540: 2454503, 35550: 2454673}
[2025-05-30 02:45:07] 2025-05-30 06:44:51,597 | INFO     | --------------------------------------------------
[2025-05-30 02:45:07] 2025-05-30 06:44:51,597 | INFO     | 
[2025-05-30 02:45:07] 2025-05-30 06:44:51,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-30 02:45:07] 2025-05-30 06:44:51,622 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,625 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 02:45:07] 2025-05-30 06:44:51,625 | INFO     | job 6670934416 has completed (purged errors)
[2025-05-30 02:45:07] 2025-05-30 06:44:51,625 | INFO     | overall cleanup function is called
[2025-05-30 02:45:07] 2025-05-30 06:44:52,632 | INFO     | --- collectZombieJob: --- 10, [12085]
[2025-05-30 02:45:07] 2025-05-30 06:44:52,633 | INFO     | zombie collector waiting for pid 12085
[2025-05-30 02:45:07] 2025-05-30 06:44:52,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 02:45:07] 2025-05-30 06:44:52,633 | INFO     | collected zombie processes
[2025-05-30 02:45:07] 2025-05-30 06:44:52,633 | INFO     | will attempt to kill all subprocesses of pid=12085
[2025-05-30 02:45:07] 2025-05-30 06:44:52,833 | INFO     | process IDs to be killed: [12085] (in reverse order)
[2025-05-30 02:45:07] 2025-05-30 06:44:52,930 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 02:45:07] 2025-05-30 06:44:52,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 02:45:07] 2025-05-30 06:44:52,936 | INFO     | did not find any defunct processes belonging to 12085
[2025-05-30 02:45:07] 2025-05-30 06:44:52,941 | INFO     | did not find any defunct processes belonging to 12085
[2025-05-30 02:45:07] 2025-05-30 06:44:52,941 | INFO     | ready for new job
[2025-05-30 02:45:07] 2025-05-30 06:44:52,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 02:45:07] 2025-05-30 06:44:52,943 | INFO     | **************************************
[2025-05-30 02:45:07] 2025-05-30 06:44:52,943 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 02:45:07] 2025-05-30 06:44:52,943 | INFO     | **************************************
[2025-05-30 02:45:07] 2025-05-30 06:44:52,943 | INFO     | 
[2025-05-30 02:45:07] 2025-05-30 06:44:52,945 | INFO     | architecture information:
[2025-05-30 02:45:07] 2025-05-30 06:44:52,945 | INFO     | executing command: cat /etc/os-release
[2025-05-30 02:45:07] 2025-05-30 06:44:52,961 | INFO     | cat /etc/os-release:
[2025-05-30 02:45:07] NAME="CentOS Linux"
[2025-05-30 02:45:07] VERSION="7 (Core)"
[2025-05-30 02:45:07] ID="centos"
[2025-05-30 02:45:07] ID_LIKE="rhel fedora"
[2025-05-30 02:45:07] VERSION_ID="7"
[2025-05-30 02:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 02:45:07] ANSI_COLOR="0;31"
[2025-05-30 02:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 02:45:07] HOME_URL="https://www.centos.org/"
[2025-05-30 02:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 02:45:07] 
[2025-05-30 02:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 02:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 02:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 02:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 02:45:07] 
[2025-05-30 02:45:07] 2025-05-30 06:44:52,962 | INFO     | **************************************
[2025-05-30 02:45:07] 2025-05-30 06:44:53,465 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-30 02:45:07] 2025-05-30 06:44:53,483 | INFO     | sufficient remaining disk space (56500420608 B)
[2025-05-30 02:45:07] 2025-05-30 06:44:53,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 02:45:07] 2025-05-30 06:44:53,484 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 02:45:07] 2025-05-30 06:44:53,484 | INFO     | update_server=False
[2025-05-30 02:45:07] 2025-05-30 06:44:53,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 02:45:07] 2025-05-30 06:44:53,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 02:45:07] 2025-05-30 06:44:53,574 | INFO     | all job control threads have been joined
[2025-05-30 02:45:07] 2025-05-30 06:44:53,675 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 02:45:07] 2025-05-30 06:44:53,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 02:45:07] 2025-05-30 06:44:53,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 02:45:07] 2025-05-30 06:44:53,982 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-30 02:45:07] 2025-05-30 06:44:53,983 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-30 02:45:07] 2025-05-30 06:44:53,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 02:45:07] 2025-05-30 06:44:53,983 | INFO     | will abort loop
[2025-05-30 02:45:07] 2025-05-30 06:44:54,094 | INFO     | all payload control threads have been joined
[2025-05-30 02:45:07] 2025-05-30 06:44:54,489 | INFO     | [job] retrieve thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:54,489 | INFO     | [job] queue monitor thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:54,500 | INFO     | all data control threads have been joined
[2025-05-30 02:45:07] 2025-05-30 06:44:54,579 | INFO     | [job] control thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:54,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 02:45:07] 2025-05-30 06:44:54,988 | INFO     | [job] job monitor thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,100 | INFO     | [payload] control thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,171 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,262 | INFO     | [payload] failed_post thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,301 | INFO     | [job] validate thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,418 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,505 | INFO     | [data] control thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,609 | INFO     | [payload] validate_post thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,794 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,878 | INFO     | [data] copytool_in thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:55,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:44:56,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 02:45:07] 2025-05-30 06:44:56,922 | INFO     | [data] copytool_out thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:45:00,915 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 02:45:07] 2025-05-30 06:45:01,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005324109632)>', '<ExcThread(monitor, started 140004458231552)>']
[2025-05-30 02:45:07] 2025-05-30 06:45:01,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 02:45:07] 2025-05-30 06:45:01,717 | INFO     | [monitor] control thread has ended
[2025-05-30 02:45:07] 2025-05-30 06:45:06,622 | INFO     | all workflow threads have been joined
[2025-05-30 02:45:07] 2025-05-30 06:45:06,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 02:45:07] 2025-05-30 06:45:06,623 | INFO     | traces error code: 0
[2025-05-30 02:45:07] 2025-05-30 06:45:06,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 02:45:07] 2025-05-30 06:45:06,807 [wrapper] ==== pilot stdout END ====
[2025-05-30 02:45:07] 2025-05-30 06:45:06,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 02:45:07] 2025-05-30 06:45:06,826 [wrapper] pilotpid: 42652
[2025-05-30 02:45:07] 2025-05-30 06:45:06,829 [wrapper] Pilot exit status: 0
[2025-05-30 02:45:07] 2025-05-30 06:45:06,850 [wrapper] pandaids: 6670934416
[2025-05-30 02:45:07] 2025-05-30 06:45:06,915 [wrapper] cleanup supervisor_pilot 16128 42653
[2025-05-30 02:45:07] 2025-05-30 06:45:06,920 [wrapper] Test setup, not cleaning
[2025-05-30 02:45:07] 2025-05-30 06:45:06,925 [wrapper] apfmon messages muted
[2025-05-30 02:45:07] 2025-05-30 06:45:06,928 [wrapper] ==== wrapper stdout END ====
[2025-05-30 02:45:07] 2025-05-30 06:45:06,932 [wrapper] ==== wrapper stderr END ====
[2025-05-30 02:45:07]  *** Error codes and diagnostics ***
[2025-05-30 02:45:07]     "exeErrorCode": 0,
[2025-05-30 02:45:07]     "exeErrorDiag": "",
[2025-05-30 02:45:07]     "pilotErrorCode": 0,
[2025-05-30 02:45:07]     "pilotErrorDiag": "",
[2025-05-30 02:45:07]  *** Listing of results directory ***
[2025-05-30 02:45:07] total 417108
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas    495897 May 29 07:24 pilot3.tar.gz
[2025-05-30 02:45:07] -rwx------ 1 boincer umatlas     37140 May 29 07:27 runpilot2-wrapper.sh
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas      5111 May 29 07:27 queuedata.json
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas       100 May 29 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 02:45:07] -rwxr-xr-x 1 boincer umatlas      7986 May 29 16:48 run_atlas
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas       105 May 29 16:48 job.xml
[2025-05-30 02:45:07] -rw-r--r-- 2 boincer umatlas 224652405 May 29 16:48 EVNT.44871834._001399.pool.root.1
[2025-05-30 02:45:07] -rw-r--r-- 2 boincer umatlas    508880 May 29 16:48 input.tar.gz
[2025-05-30 02:45:07] -rw-r--r-- 2 boincer umatlas     15093 May 29 16:48 start_atlas.sh
[2025-05-30 02:45:07] drwxrwx--x 2 boincer umatlas      4096 May 29 16:48 shared
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas         0 May 29 16:48 boinc_lockfile
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas      2559 May 29 16:48 pandaJob.out
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas      2069 May 29 16:48 stderr.txt
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas    992350 May 29 16:50 agis_schedconf.cvmfs.json
[2025-05-30 02:45:07] drwx------ 4 boincer umatlas      4096 May 29 16:51 pilot3
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas      6131 May 30 02:36 init_data.xml
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas 191600757 May 30 02:43 HITS.44871837._099427.pool.root.1
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas       531 May 30 02:44 boinc_task_state.xml
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas        95 May 30 02:44 pilot_heartbeat.json
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas      1063 May 30 02:44 memory_monitor_summary.json
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas   1603667 May 30 02:44 agis_ddmendpoints.agis.ALL.json
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas    597270 May 30 02:44 log.44871837._099427.job.log.tgz.1
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas      7757 May 30 02:44 heartbeat.json
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas        28 May 30 02:45 wrapper_checkpoint.txt
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas      8192 May 30 02:45 boinc_mmap_file
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas      4539 May 30 02:45 pilotlog.txt
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas   2925392 May 30 02:45 log.44871837._099427.job.log.1
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas       357 May 30 02:45 output.list
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas       620 May 30 02:45 runtime_log
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas   3543040 May 30 02:45 result.tar.gz
[2025-05-30 02:45:07] -rw-r--r-- 1 boincer umatlas      8655 May 30 02:45 runtime_log.err
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas       662 May 30 02:45 Ez9NDmbbqe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY7UKDmFL26Hm.diag
[2025-05-30 02:45:07] HITS file was successfully produced:
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas 191600757 May 30 02:43 shared/HITS.pool.root.1
[2025-05-30 02:45:07]  *** Contents of shared directory: ***
[2025-05-30 02:45:07] total 410480
[2025-05-30 02:45:07] -rw-r--r-- 2 boincer umatlas 224652405 May 29 16:48 ATLAS.root_0
[2025-05-30 02:45:07] -rw-r--r-- 2 boincer umatlas    508880 May 29 16:48 input.tar.gz
[2025-05-30 02:45:07] -rw-r--r-- 2 boincer umatlas     15093 May 29 16:48 start_atlas.sh
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas 191600757 May 30 02:43 HITS.pool.root.1
[2025-05-30 02:45:07] -rw------- 1 boincer umatlas   3543040 May 30 02:45 result.tar.gz
02:45:09 (34882): run_atlas exited; CPU time 82763.713164
02:45:09 (34882): called boinc_finish(0)

</stderr_txt>
]]>

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