Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:12:55 (3271): wrapper (7.7.26015): starting
12:12:55 (3271): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 12:12:55] Arguments: --nthreads 8
[2025-05-30 12:12:55] Threads: 8
[2025-05-30 12:12:55] Checking for CVMFS
[2025-05-30 12:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 12:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 12:12:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 12:12:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 12:12:57] 2.11.2.0 14339 26054 94972 146595 2 14 21628470 25165824 4636 130560 0 16396577 99.788 16145112 4600 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 12:12:57] CVMFS is ok
[2025-05-30 12:12:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 12:12:57] Checking for apptainer binary...
[2025-05-30 12:12:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 12:12:57] Running /usr/bin/apptainer --version
[2025-05-30 12:12:57] apptainer version 1.3.2-1.el7
[2025-05-30 12:12:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 12:13:06] cg-vwn496.simple-grid.lan
[2025-05-30 12:13:06] apptainer works
[2025-05-30 12:13:06] Set ATHENA_PROC_NUMBER=8
[2025-05-30 12:13:06] Set ATHENA_CORE_NUMBER=8
[2025-05-30 12:13:06] Starting ATLAS job with PandaID=6670934413
[2025-05-30 12:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 17:20:22]  *** The last 200 lines of the pilot log: ***
[2025-05-30 17:20:22] 2025-05-30 15:06:50,896 | INFO     | extracted standard info from prmon json
[2025-05-30 17:20:22] 2025-05-30 15:06:50,896 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 17:20:22] 2025-05-30 15:06:50,897 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 17:20:22] 2025-05-30 15:06:50,897 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 17:20:22] 2025-05-30 15:06:50,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 17:20:22] 2025-05-30 15:06:50,902 | INFO     | fitting pss+swap vs Time
[2025-05-30 17:20:22] 2025-05-30 15:06:50,903 | INFO     | sum of square deviations: 6590404498.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,905 | INFO     | sum of deviations: 44621359212.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,905 | INFO     | mean x: 1748609080.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,905 | INFO     | mean y: 2485816.3862815886
[2025-05-30 17:20:22] 2025-05-30 15:06:50,905 | INFO     | -- intersect: -11836744067.564438
[2025-05-30 17:20:22] 2025-05-30 15:06:50,906 | INFO     | intersect: -11836744067.564438
[2025-05-30 17:20:22] 2025-05-30 15:06:50,906 | INFO     | chi2: 7.04569622250177
[2025-05-30 17:20:22] 2025-05-30 15:06:50,907 | INFO     | sum of square deviations: 6239923508.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,909 | INFO     | sum of deviations: 62522462186.5
[2025-05-30 17:20:22] 2025-05-30 15:06:50,909 | INFO     | mean x: 1748608927.5
[2025-05-30 17:20:22] 2025-05-30 15:06:50,909 | INFO     | mean y: 2493488.893382353
[2025-05-30 17:20:22] 2025-05-30 15:06:50,909 | INFO     | -- intersect: -17518127622.636284
[2025-05-30 17:20:22] 2025-05-30 15:06:50,909 | INFO     | intersect: -17518127622.636284
[2025-05-30 17:20:22] 2025-05-30 15:06:50,910 | INFO     | chi2: 6.329292947058435
[2025-05-30 17:20:22] 2025-05-30 15:06:50,910 | INFO     | current chi2=6.329292947058435 (change=10.167955767882319 %)
[2025-05-30 17:20:22] 2025-05-30 15:06:50,910 | INFO     | right removable region: 271
[2025-05-30 17:20:22] 2025-05-30 15:06:50,910 | INFO     | sum of square deviations: 6239923508.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,912 | INFO     | sum of deviations: -53927483710.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,913 | INFO     | mean x: 1748609232.5
[2025-05-30 17:20:22] 2025-05-30 15:06:50,913 | INFO     | mean y: 2528670.3529411764
[2025-05-30 17:20:22] 2025-05-30 15:06:50,913 | INFO     | -- intersect: 15114588262.093588
[2025-05-30 17:20:22] 2025-05-30 15:06:50,913 | INFO     | intersect: 15114588262.093588
[2025-05-30 17:20:22] 2025-05-30 15:06:50,913 | INFO     | chi2: 2.1786223664698827
[2025-05-30 17:20:22] 2025-05-30 15:06:50,913 | INFO     | current chi2=2.1786223664698827 (change=69.07867870442614 %)
[2025-05-30 17:20:22] 2025-05-30 15:06:50,919 | INFO     | sum of square deviations: 5902093918.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,921 | INFO     | sum of deviations: -93769696906.00002
[2025-05-30 17:20:22] 2025-05-30 15:06:50,921 | INFO     | mean x: 1748609385.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,922 | INFO     | mean y: 2546540.606741573
[2025-05-30 17:20:22] 2025-05-30 15:06:50,922 | INFO     | -- intersect: 27783631409.21203
[2025-05-30 17:20:22] 2025-05-30 15:06:50,922 | INFO     | intersect: 27783631409.21203
[2025-05-30 17:20:22] 2025-05-30 15:06:50,922 | INFO     | chi2: 1.0789253301732487
[2025-05-30 17:20:22] 2025-05-30 15:06:50,922 | INFO     | current chi2=1.0789253301732487 (change=50.47671653525349 %)
[2025-05-30 17:20:22] 2025-05-30 15:06:50,923 | INFO     | sum of square deviations: 5576683165.5
[2025-05-30 17:20:22] 2025-05-30 15:06:50,925 | INFO     | sum of deviations: -99019366727.00018
[2025-05-30 17:20:22] 2025-05-30 15:06:50,925 | INFO     | mean x: 1748609537.5
[2025-05-30 17:20:22] 2025-05-30 15:06:50,925 | INFO     | mean y: 2549000.709923664
[2025-05-30 17:20:22] 2025-05-30 15:06:50,925 | INFO     | -- intersect: 31050791104.046013
[2025-05-30 17:20:22] 2025-05-30 15:06:50,925 | INFO     | intersect: 31050791104.046013
[2025-05-30 17:20:22] 2025-05-30 15:06:50,925 | INFO     | chi2: 1.0349749228072425
[2025-05-30 17:20:22] 2025-05-30 15:06:50,926 | INFO     | current chi2=1.0349749228072425 (change=4.0735355948079235 %)
[2025-05-30 17:20:22] 2025-05-30 15:06:50,926 | INFO     | left removable region: 30
[2025-05-30 17:20:22] 2025-05-30 15:06:50,926 | INFO     | sum of square deviations: 4340323240.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,928 | INFO     | sum of deviations: -61600444106.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,928 | INFO     | mean x: 1748609812.0
[2025-05-30 17:20:22] 2025-05-30 15:06:50,928 | INFO     | mean y: 2549093.286307054
[2025-05-30 17:20:22] 2025-05-30 15:06:50,928 | INFO     | -- intersect: 24819857627.963364
[2025-05-30 17:20:22] 2025-05-30 15:06:50,928 | INFO     | intersect: 24819857627.963364
[2025-05-30 17:20:22] 2025-05-30 15:06:50,929 | INFO     | chi2: 0.22670005964745166
[2025-05-30 17:20:22] 2025-05-30 15:06:50,929 | INFO     | -- intersect: 24819857627.963364
[2025-05-30 17:20:22] 2025-05-30 15:06:50,929 | INFO     | current memory leak: -14.19 B/s (using 241 data points, chi2=0.23)
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | ..............................
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . Timing measurements:
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . get job = 0 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . initial setup = 8 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . payload setup = 177 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . stage-in = 0 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . payload execution = 16996 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . stage-out = 3 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | . log creation = 1 s
[2025-05-30 17:20:22] 2025-05-30 15:06:50,930 | INFO     | ..............................
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | 
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | job summary report
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | --------------------------------------------------
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | PanDA job id: 6670934413
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | task id: 44871837
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | errors: (none)
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | pilot state: finished 
[2025-05-30 17:20:22] 2025-05-30 15:06:51,065 | INFO     | transexitcode: 0
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | exeerrorcode: 0
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | exeerrordiag: 
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | exitcode: 0
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | exitmsg: OK
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | cpuconsumptiontime: 62508 s
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | nevents: 400
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | neventsw: 0
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | pid: 19293
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | pgrp: 19293
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | corecount: 8
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | event service: False
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | sizes: {0: 2404349, 1: 2405035, 2: 2405234, 13: 2405234, 23: 2405290, 34: 2405318, 45: 2405474, 55: 2405502, 66: 2405530, 77: 2405558, 87: 2405820, 88: 2406128, 17
[2025-05-30 17:20:22] 2025-05-30 15:06:51,066 | INFO     | --------------------------------------------------
[2025-05-30 17:20:22] 2025-05-30 15:06:51,067 | INFO     | 
[2025-05-30 17:20:22] 2025-05-30 15:06:51,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-05-30 17:20:22] 2025-05-30 15:06:51,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | job 6670934413 has completed (purged errors)
[2025-05-30 17:20:22] 2025-05-30 15:06:51,676 | INFO     | overall cleanup function is called
[2025-05-30 17:20:22] 2025-05-30 15:06:52,685 | INFO     | --- collectZombieJob: --- 10, [19293]
[2025-05-30 17:20:22] 2025-05-30 15:06:52,685 | INFO     | zombie collector waiting for pid 19293
[2025-05-30 17:20:22] 2025-05-30 15:06:52,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 17:20:22] 2025-05-30 15:06:52,685 | INFO     | collected zombie processes
[2025-05-30 17:20:22] 2025-05-30 15:06:52,685 | INFO     | will attempt to kill all subprocesses of pid=19293
[2025-05-30 17:20:22] 2025-05-30 15:06:52,793 | INFO     | process IDs to be killed: [19293] (in reverse order)
[2025-05-30 17:20:22] 2025-05-30 15:06:53,595 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 17:20:22] 2025-05-30 15:06:53,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 17:20:22] 2025-05-30 15:06:53,599 | INFO     | did not find any defunct processes belonging to 19293
[2025-05-30 17:20:22] 2025-05-30 15:06:53,601 | INFO     | did not find any defunct processes belonging to 19293
[2025-05-30 17:20:22] 2025-05-30 15:06:53,602 | INFO     | ready for new job
[2025-05-30 17:20:22] 2025-05-30 15:06:53,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 17:20:22] 2025-05-30 15:06:53,603 | INFO     | **************************************
[2025-05-30 17:20:22] 2025-05-30 15:06:53,604 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 17:20:22] 2025-05-30 15:06:53,604 | INFO     | **************************************
[2025-05-30 17:20:22] 2025-05-30 15:06:53,604 | INFO     | 
[2025-05-30 17:20:22] 2025-05-30 15:06:53,604 | INFO     | pilot is running in a VM
[2025-05-30 17:20:22] 2025-05-30 15:06:53,604 | INFO     | architecture information:
[2025-05-30 17:20:22] 2025-05-30 15:06:53,608 | INFO     | executing command: cat /etc/os-release
[2025-05-30 17:20:22] 2025-05-30 15:06:53,830 | INFO     | cat /etc/os-release:
[2025-05-30 17:20:22] NAME="CentOS Linux"
[2025-05-30 17:20:22] VERSION="7 (Core)"
[2025-05-30 17:20:22] ID="centos"
[2025-05-30 17:20:22] ID_LIKE="rhel fedora"
[2025-05-30 17:20:22] VERSION_ID="7"
[2025-05-30 17:20:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 17:20:22] ANSI_COLOR="0;31"
[2025-05-30 17:20:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 17:20:22] HOME_URL="https://www.centos.org/"
[2025-05-30 17:20:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 17:20:22] 
[2025-05-30 17:20:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 17:20:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 17:20:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 17:20:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 17:20:22] 
[2025-05-30 17:20:22] 2025-05-30 15:06:53,831 | INFO     | **************************************
[2025-05-30 17:20:22] 2025-05-30 15:06:54,334 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-05-30 17:20:22] 2025-05-30 15:06:54,585 | INFO     | sufficient remaining disk space (497252564992 B)
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | INFO     | update_server=False
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 17:20:22] 2025-05-30 15:06:54,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 17:20:22] 2025-05-30 15:06:54,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 17:20:22] 2025-05-30 15:06:54,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 17:20:22] 2025-05-30 15:06:54,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 17:20:22] 2025-05-30 15:06:54,896 | INFO     | aborting loop
[2025-05-30 17:20:22] 2025-05-30 15:06:55,103 | INFO     | all payload control threads have been joined
[2025-05-30 17:20:22] 2025-05-30 15:06:55,119 | INFO     | all data control threads have been joined
[2025-05-30 17:20:22] 2025-05-30 15:06:55,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 17:20:22] 2025-05-30 15:06:55,592 | INFO     | [job] retrieve thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:55,729 | INFO     | [payload] failed_post thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:55,869 | INFO     | [payload] validate_post thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:55,902 | INFO     | [job] job monitor thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 17:20:22] 2025-05-30 15:06:56,109 | INFO     | [payload] control thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,125 | INFO     | [data] control thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,218 | INFO     | all job control threads have been joined
[2025-05-30 17:20:22] 2025-05-30 15:06:56,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,356 | INFO     | [data] copytool_in thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,510 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,650 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,779 | INFO     | [data] copytool_out thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,936 | INFO     | [job] validate thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:56,985 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:57,085 | INFO     | [job] queue monitor thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:57,224 | INFO     | [job] control thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:06:59,362 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 17:20:22] 2025-05-30 15:07:00,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139937415046976)>', '<ExcThread(monitor, started 139936963467008)>']
[2025-05-30 17:20:22] 2025-05-30 15:07:00,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 17:20:22] 2025-05-30 15:07:00,621 | INFO     | [monitor] control thread has ended
[2025-05-30 17:20:22] 2025-05-30 15:07:05,270 | INFO     | all workflow threads have been joined
[2025-05-30 17:20:22] 2025-05-30 15:07:05,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 17:20:22] 2025-05-30 15:07:05,270 | INFO     | traces error code: 0
[2025-05-30 17:20:22] 2025-05-30 15:07:05,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 17:20:22] 2025-05-30 15:07:05,544 [wrapper] ==== pilot stdout END ====
[2025-05-30 17:20:22] 2025-05-30 15:07:05,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 17:20:22] 2025-05-30 15:07:05,644 [wrapper] pilotpid: 12651
[2025-05-30 17:20:22] 2025-05-30 15:07:05,684 [wrapper] Pilot exit status: 0
[2025-05-30 17:20:22] 2025-05-30 15:07:06,102 [wrapper] pandaids: 6670934413
[2025-05-30 17:20:22] 2025-05-30 15:07:06,770 [wrapper] cleanup supervisor_pilot 23534 12652
[2025-05-30 17:20:22] 2025-05-30 15:07:06,870 [wrapper] Test setup, not cleaning
[2025-05-30 17:20:22] 2025-05-30 15:07:06,977 [wrapper] apfmon messages muted
[2025-05-30 17:20:22] 2025-05-30 15:07:07,074 [wrapper] ==== wrapper stdout END ====
[2025-05-30 17:20:22] 2025-05-30 15:07:07,147 [wrapper] ==== wrapper stderr END ====
[2025-05-30 17:20:22]  *** Error codes and diagnostics ***
[2025-05-30 17:20:22]     "exeErrorCode": 0,
[2025-05-30 17:20:22]     "exeErrorDiag": "",
[2025-05-30 17:20:22]     "pilotErrorCode": 0,
[2025-05-30 17:20:22]     "pilotErrorDiag": "",
[2025-05-30 17:20:22]  *** Listing of results directory ***
[2025-05-30 17:20:22] total 422248
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc      5111 May 29 13:24 queuedata.json
[2025-05-30 17:20:22] -rwx------. 1 boinc boinc     37140 May 29 13:24 runpilot2-wrapper.sh
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc    495897 May 29 13:24 pilot3.tar.gz
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc       100 May 30 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 17:20:22] -rwxr-xr-x. 1 boinc boinc      7986 May 30 12:12 run_atlas
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc       105 May 30 12:12 job.xml
[2025-05-30 17:20:22] -rw-r--r--. 2 boinc boinc 226390610 May 30 12:12 EVNT.44871834._001398.pool.root.1
[2025-05-30 17:20:22] -rw-r--r--. 2 boinc boinc    508880 May 30 12:12 input.tar.gz
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc      6373 May 30 12:12 init_data.xml
[2025-05-30 17:20:22] -rw-r--r--. 2 boinc boinc     15093 May 30 12:12 start_atlas.sh
[2025-05-30 17:20:22] drwxrwx--x. 2 boinc boinc        68 May 30 12:12 shared
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc         0 May 30 12:12 boinc_lockfile
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc      2555 May 30 12:13 pandaJob.out
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc    992136 May 30 12:15 agis_schedconf.cvmfs.json
[2025-05-30 17:20:22] drwx------. 4 boinc boinc      4096 May 30 12:16 pilot3
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc 198365854 May 30 17:03 HITS.44871837._099424.pool.root.1
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc       531 May 30 17:04 boinc_task_state.xml
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc      1016 May 30 17:05 memory_monitor_summary.json
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc   1603667 May 30 17:05 agis_ddmendpoints.agis.ALL.json
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc    398141 May 30 17:05 log.44871837._099424.job.log.tgz.1
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc        95 May 30 17:06 pilot_heartbeat.json
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc      7692 May 30 17:06 heartbeat.json
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc      4540 May 30 17:07 pilotlog.txt
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc   1497340 May 30 17:07 log.44871837._099424.job.log.1
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc       357 May 30 17:07 output.list
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc       620 May 30 17:07 runtime_log
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc   1914880 May 30 17:07 result.tar.gz
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc      8673 May 30 17:07 runtime_log.err
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc       657 May 30 17:07 JgkKDmgYqe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtReKDmtZ8pBo.diag
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc      8192 May 30 17:20 boinc_mmap_file
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc        28 May 30 17:20 wrapper_checkpoint.txt
[2025-05-30 17:20:22] -rw-r--r--. 1 boinc boinc     20509 May 30 17:20 stderr.txt
[2025-05-30 17:20:22] HITS file was successfully produced:
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc 198365854 May 30 17:03 shared/HITS.pool.root.1
[2025-05-30 17:20:22]  *** Contents of shared directory: ***
[2025-05-30 17:20:22] total 417196
[2025-05-30 17:20:22] -rw-r--r--. 2 boinc boinc 226390610 May 30 12:12 ATLAS.root_0
[2025-05-30 17:20:22] -rw-r--r--. 2 boinc boinc    508880 May 30 12:12 input.tar.gz
[2025-05-30 17:20:22] -rw-r--r--. 2 boinc boinc     15093 May 30 12:12 start_atlas.sh
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc 198365854 May 30 17:03 HITS.pool.root.1
[2025-05-30 17:20:22] -rw-------. 1 boinc boinc   1914880 May 30 17:07 result.tar.gz
17:20:24 (3271): run_atlas exited; CPU time 62723.798097
17:20:24 (3271): called boinc_finish(0)

</stderr_txt>
]]>

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