Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:31:38 (3751390): wrapper (7.7.26015): starting
21:31:38 (3751390): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 21:31:38] Arguments: --nthreads 4
[2025-06-05 21:31:38] Threads: 4
[2025-06-05 21:31:38] Checking for CVMFS
[2025-06-05 21:31:38] No cvmfs_config command found, will try listing directly
[2025-06-05 21:31:38] CVMFS is ok
[2025-06-05 21:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 21:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 21:31:38] Further information can be found at the LHC@home message board.
[2025-06-05 21:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:31:38] Checking for apptainer binary...
[2025-06-05 21:31:38] which: no apptainer in ((null))
[2025-06-05 21:31:38] apptainer is not installed, using version from CVMFS
[2025-06-05 21:31:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:31:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-06-05 21:31:38] apptainer works
[2025-06-05 21:31:38] Set ATHENA_PROC_NUMBER=4
[2025-06-05 21:31:38] Set ATHENA_CORE_NUMBER=4
[2025-06-05 21:31:38] Starting ATLAS job with PandaID=6669623593
[2025-06-05 21:31:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:43:01]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:43:01] 2025-06-05 23:33:04,724 | WARNING  | process 3761837 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 01:43:01] 2025-06-05 23:33:04,725 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6669623593/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:43:01] 2025-06-05 23:33:05,032 | INFO     | number of running child processes to parent process 3761837: 1
[2025-06-06 01:43:01] 2025-06-05 23:33:05,032 | INFO     | maximum number of monitored processes: 6
[2025-06-06 01:43:01] 2025-06-05 23:33:06,105 | INFO     | PID=3754976 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 01:43:01] 2025-06-05 23:33:06,106 | INFO     | .. there are 3 such processes running
[2025-06-06 01:43:01] 2025-06-05 23:33:07,182 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 01:43:01] 2025-06-05 23:33:07,182 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6669623593/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,183 | INFO     | extracted standard info from prmon json
[2025-06-06 01:43:01] 2025-06-05 23:33:07,183 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:43:01] 2025-06-05 23:33:07,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:43:01] 2025-06-05 23:33:07,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:43:01] 2025-06-05 23:33:07,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:43:01] 2025-06-05 23:33:07,188 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:43:01] 2025-06-05 23:33:07,189 | INFO     | sum of square deviations: 4127772278.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,190 | INFO     | sum of deviations: 6623580385.000008
[2025-06-06 01:43:01] 2025-06-05 23:33:07,191 | INFO     | mean x: 1749159131.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,191 | INFO     | mean y: 2350022.23628692
[2025-06-06 01:43:01] 2025-06-05 23:33:07,191 | INFO     | -- intersect: -2804417243.5075474
[2025-06-06 01:43:01] 2025-06-05 23:33:07,191 | INFO     | intersect: -2804417243.5075474
[2025-06-06 01:43:01] 2025-06-05 23:33:07,191 | INFO     | chi2: 1.8081332299261752
[2025-06-06 01:43:01] 2025-06-05 23:33:07,192 | INFO     | sum of square deviations: 3871990738.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,194 | INFO     | sum of deviations: 6382532693.499995
[2025-06-06 01:43:01] 2025-06-05 23:33:07,194 | INFO     | mean x: 1749158978.5
[2025-06-06 01:43:01] 2025-06-05 23:33:07,194 | INFO     | mean y: 2349878.9094827585
[2025-06-06 01:43:01] 2025-06-05 23:33:07,194 | INFO     | -- intersect: -2880938104.411438
[2025-06-06 01:43:01] 2025-06-05 23:33:07,194 | INFO     | intersect: -2880938104.411438
[2025-06-06 01:43:01] 2025-06-05 23:33:07,194 | INFO     | chi2: 1.8084123009383715
[2025-06-06 01:43:01] 2025-06-05 23:33:07,195 | INFO     | current chi2=1.8084123009383715 (change=-0.015434206261872523 %)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,195 | INFO     | right removable region: 231
[2025-06-06 01:43:01] 2025-06-05 23:33:07,195 | INFO     | sum of square deviations: 3871990738.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,197 | INFO     | sum of deviations: -33035660078.000004
[2025-06-06 01:43:01] 2025-06-05 23:33:07,197 | INFO     | mean x: 1749159283.5
[2025-06-06 01:43:01] 2025-06-05 23:33:07,197 | INFO     | mean y: 2373481.4051724137
[2025-06-06 01:43:01] 2025-06-05 23:33:07,197 | INFO     | -- intersect: 14926125995.81112
[2025-06-06 01:43:01] 2025-06-05 23:33:07,197 | INFO     | intersect: 14926125995.81112
[2025-06-06 01:43:01] 2025-06-05 23:33:07,198 | INFO     | chi2: 0.11936429438865157
[2025-06-06 01:43:01] 2025-06-05 23:33:07,198 | INFO     | current chi2=0.11936429438865157 (change=93.39847902726034 %)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,198 | INFO     | sum of square deviations: 3627000098.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,200 | INFO     | sum of deviations: -31061215554.99998
[2025-06-06 01:43:01] 2025-06-05 23:33:07,200 | INFO     | mean x: 1749159436.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,200 | INFO     | mean y: 2372234.7533039646
[2025-06-06 01:43:01] 2025-06-05 23:33:07,200 | INFO     | -- intersect: 14981974333.914368
[2025-06-06 01:43:01] 2025-06-05 23:33:07,200 | INFO     | intersect: 14981974333.914368
[2025-06-06 01:43:01] 2025-06-05 23:33:07,201 | INFO     | chi2: 0.11504822792236082
[2025-06-06 01:43:01] 2025-06-05 23:33:07,201 | INFO     | current chi2=0.11504822792236082 (change=3.615877334504727 %)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,201 | INFO     | left removable region: 20
[2025-06-06 01:43:01] 2025-06-05 23:33:07,201 | INFO     | sum of square deviations: 2912836010.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,203 | INFO     | sum of deviations: -20839731889.000008
[2025-06-06 01:43:01] 2025-06-05 23:33:07,203 | INFO     | mean x: 1749159558.0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,203 | INFO     | mean y: 2365937.521327014
[2025-06-06 01:43:01] 2025-06-05 23:33:07,203 | INFO     | -- intersect: 12516635911.752302
[2025-06-06 01:43:01] 2025-06-05 23:33:07,203 | INFO     | intersect: 12516635911.752302
[2025-06-06 01:43:01] 2025-06-05 23:33:07,204 | INFO     | chi2: 0.0991673038309033
[2025-06-06 01:43:01] 2025-06-05 23:33:07,204 | INFO     | -- intersect: 12516635911.752302
[2025-06-06 01:43:01] 2025-06-05 23:33:07,204 | INFO     | current memory leak: -7.15 B/s (using 211 data points, chi2=0.10)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | ..............................
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . Timing measurements:
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . get job = 0 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . initial setup = 1 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . payload setup = 6 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . stage-in = 0 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . payload execution = 14446 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,205 | INFO     | . stage-out = 1 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,206 | INFO     | . log creation = 0 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,206 | INFO     | ..............................
[2025-06-06 01:43:01] 2025-06-05 23:33:07,705 | INFO     | 
[2025-06-06 01:43:01] 2025-06-05 23:33:07,705 | INFO     | job summary report
[2025-06-06 01:43:01] 2025-06-05 23:33:07,705 | INFO     | --------------------------------------------------
[2025-06-06 01:43:01] 2025-06-05 23:33:07,705 | INFO     | PanDA job id: 6669623593
[2025-06-06 01:43:01] 2025-06-05 23:33:07,705 | INFO     | task id: 44871837
[2025-06-06 01:43:01] 2025-06-05 23:33:07,705 | INFO     | errors: (none)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | pilot state: finished 
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | transexitcode: 0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | exeerrorcode: 0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | exeerrordiag: 
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | exitcode: 0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | exitmsg: OK
[2025-06-06 01:43:01] 2025-06-05 23:33:07,706 | INFO     | cpuconsumptiontime: 55846 s
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | nevents: 400
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | neventsw: 0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | pid: 3761837
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | pgrp: 3761837
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | corecount: 4
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | event service: False
[2025-06-06 01:43:01] 2025-06-05 23:33:07,707 | INFO     | sizes: {0: 2397176, 1: 2397431, 5: 2397637, 12: 2397693, 14456: 2428280, 14457: 2437427, 14464: 2437541}
[2025-06-06 01:43:01] 2025-06-05 23:33:07,708 | INFO     | --------------------------------------------------
[2025-06-06 01:43:01] 2025-06-05 23:33:07,708 | INFO     | 
[2025-06-06 01:43:01] 2025-06-05 23:33:07,708 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 01:43:01] 2025-06-05 23:33:07,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:43:01] 2025-06-05 23:33:07,733 | INFO     | job 6669623593 has completed (purged errors)
[2025-06-06 01:43:01] 2025-06-05 23:33:07,733 | INFO     | overall cleanup function is called
[2025-06-06 01:43:01] 2025-06-05 23:33:08,742 | INFO     | --- collectZombieJob: --- 10, [3761837]
[2025-06-06 01:43:01] 2025-06-05 23:33:08,742 | INFO     | zombie collector waiting for pid 3761837
[2025-06-06 01:43:01] 2025-06-05 23:33:08,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:43:01] 2025-06-05 23:33:08,742 | INFO     | collected zombie processes
[2025-06-06 01:43:01] 2025-06-05 23:33:08,743 | INFO     | will attempt to kill all subprocesses of pid=3761837
[2025-06-06 01:43:01] 2025-06-05 23:33:09,096 | INFO     | process IDs to be killed: [3761837] (in reverse order)
[2025-06-06 01:43:01] 2025-06-05 23:33:09,179 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:43:01] 2025-06-05 23:33:09,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:43:01] 2025-06-05 23:33:09,188 | INFO     | did not find any defunct processes belonging to 3761837
[2025-06-06 01:43:01] 2025-06-05 23:33:09,195 | INFO     | did not find any defunct processes belonging to 3761837
[2025-06-06 01:43:01] 2025-06-05 23:33:09,196 | INFO     | ready for new job
[2025-06-06 01:43:01] 2025-06-05 23:33:09,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:43:01] 2025-06-05 23:33:09,198 | INFO     | **************************************
[2025-06-06 01:43:01] 2025-06-05 23:33:09,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:43:01] 2025-06-05 23:33:09,198 | INFO     | **************************************
[2025-06-06 01:43:01] 2025-06-05 23:33:09,199 | INFO     | 
[2025-06-06 01:43:01] 2025-06-05 23:33:09,201 | INFO     | architecture information:
[2025-06-06 01:43:01] 2025-06-05 23:33:09,202 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:43:01] 2025-06-05 23:33:09,215 | INFO     | cat /etc/os-release:
[2025-06-06 01:43:01] NAME="CentOS Linux"
[2025-06-06 01:43:01] VERSION="7 (Core)"
[2025-06-06 01:43:01] ID="centos"
[2025-06-06 01:43:01] ID_LIKE="rhel fedora"
[2025-06-06 01:43:01] VERSION_ID="7"
[2025-06-06 01:43:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:43:01] ANSI_COLOR="0;31"
[2025-06-06 01:43:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:43:01] HOME_URL="https://www.centos.org/"
[2025-06-06 01:43:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:43:01] 
[2025-06-06 01:43:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:43:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:43:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:43:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:43:01] 
[2025-06-06 01:43:01] 2025-06-05 23:33:09,216 | INFO     | **************************************
[2025-06-06 01:43:01] 2025-06-05 23:33:09,719 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 01:43:01] 2025-06-05 23:33:09,733 | INFO     | sufficient remaining disk space (1644138856448 B)
[2025-06-06 01:43:01] 2025-06-05 23:33:09,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:43:01] 2025-06-05 23:33:09,734 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:43:01] 2025-06-05 23:33:09,734 | INFO     | update_server=False
[2025-06-06 01:43:01] 2025-06-05 23:33:09,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:43:01] 2025-06-05 23:33:10,038 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 01:43:01] 2025-06-05 23:33:10,038 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 01:43:01] 2025-06-05 23:33:10,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:43:01] 2025-06-05 23:33:10,039 | INFO     | will abort loop
[2025-06-06 01:43:01] 2025-06-05 23:33:10,117 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:43:01] 2025-06-05 23:33:10,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:43:01] 2025-06-05 23:33:10,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:43:01] 2025-06-05 23:33:10,123 | INFO     | all job control threads have been joined
[2025-06-06 01:43:01] 2025-06-05 23:33:10,427 | INFO     | all payload control threads have been joined
[2025-06-06 01:43:01] 2025-06-05 23:33:10,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:43:01] 2025-06-05 23:33:10,740 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:10,821 | INFO     | all data control threads have been joined
[2025-06-06 01:43:01] 2025-06-05 23:33:11,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:43:01] 2025-06-05 23:33:11,044 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,128 | INFO     | [job] control thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,134 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,433 | INFO     | [payload] control thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,574 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,785 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,815 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:11,824 | INFO     | [data] control thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:12,005 | INFO     | [job] validate thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:12,134 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:12,190 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:12,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:43:01] 2025-06-05 23:33:12,740 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:13,330 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:15,025 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:43:01] 2025-06-05 23:33:15,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22869203064640)>', '<ExcThread(monitor, started 22868215719680)>']
[2025-06-06 01:43:01] 2025-06-05 23:33:16,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:43:01] 2025-06-05 23:33:16,147 | INFO     | [monitor] control thread has ended
[2025-06-06 01:43:01] 2025-06-05 23:33:20,527 | INFO     | all workflow threads have been joined
[2025-06-06 01:43:01] 2025-06-05 23:33:20,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:43:01] 2025-06-05 23:33:20,528 | INFO     | traces error code: 0
[2025-06-06 01:43:01] 2025-06-05 23:33:20,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:43:01] 2025-06-05 23:33:20,648 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:43:01] 2025-06-05 23:33:20,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:43:01] 2025-06-05 23:33:20,653 [wrapper] pilotpid: 3754976
[2025-06-06 01:43:01] 2025-06-05 23:33:20,656 [wrapper] Pilot exit status: 0
[2025-06-06 01:43:01] 2025-06-05 23:33:20,665 [wrapper] pandaids: 6669623593
[2025-06-06 01:43:01] 2025-06-05 23:33:20,711 [wrapper] cleanup supervisor_pilot 3988880 3754977
[2025-06-06 01:43:01] 2025-06-05 23:33:20,714 [wrapper] Test setup, not cleaning
[2025-06-06 01:43:01] 2025-06-05 23:33:20,717 [wrapper] apfmon messages muted
[2025-06-06 01:43:01] 2025-06-05 23:33:20,719 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:43:01] 2025-06-05 23:33:20,722 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:43:01]  *** Error codes and diagnostics ***
[2025-06-06 01:43:01]     "exeErrorCode": 0,
[2025-06-06 01:43:01]     "exeErrorDiag": "",
[2025-06-06 01:43:01]     "pilotErrorCode": 0,
[2025-06-06 01:43:01]     "pilotErrorDiag": "",
[2025-06-06 01:43:01]  *** Listing of results directory ***
[2025-06-06 01:43:01] total 419292
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc    495897 May 29 10:46 pilot3.tar.gz
[2025-06-06 01:43:01] -rwx------ 1 boinc boinc     37140 May 29 10:47 runpilot2-wrapper.sh
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc      5111 May 29 10:47 queuedata.json
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc       100 Jun  5 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:43:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 21:31 run_atlas
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc       105 Jun  5 21:31 job.xml
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc      6421 Jun  5 21:31 init_data.xml
[2025-06-06 01:43:01] -rw-r--r-- 2 boinc boinc 228138706 Jun  5 21:31 EVNT.44871834._003718.pool.root.1
[2025-06-06 01:43:01] drwxrwx--x 2 boinc boinc      4096 Jun  5 21:31 shared
[2025-06-06 01:43:01] -rw-r--r-- 2 boinc boinc    508875 Jun  5 21:31 input.tar.gz
[2025-06-06 01:43:01] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:31 start_atlas.sh
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc         0 Jun  5 21:31 boinc_lockfile
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc      2559 Jun  5 21:31 pandaJob.out
[2025-06-06 01:43:01] -rw------- 1 boinc boinc    987599 Jun  5 21:31 agis_schedconf.cvmfs.json
[2025-06-06 01:43:01] drwx------ 4 boinc boinc      4096 Jun  5 21:31 pilot3
[2025-06-06 01:43:01] -rw------- 1 boinc boinc 194002100 Jun  6 01:32 HITS.44871837._097815.pool.root.1
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc       528 Jun  6 01:32 boinc_task_state.xml
[2025-06-06 01:43:01] -rw------- 1 boinc boinc        95 Jun  6 01:32 pilot_heartbeat.json
[2025-06-06 01:43:01] -rw------- 1 boinc boinc      1037 Jun  6 01:32 memory_monitor_summary.json
[2025-06-06 01:43:01] -rw------- 1 boinc boinc   1598969 Jun  6 01:32 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:43:01] -rw------- 1 boinc boinc    340387 Jun  6 01:32 log.44871837._097815.job.log.tgz.1
[2025-06-06 01:43:01] -rw------- 1 boinc boinc      7730 Jun  6 01:33 heartbeat.json
[2025-06-06 01:43:01] -rw------- 1 boinc boinc      4550 Jun  6 01:33 pilotlog.txt
[2025-06-06 01:43:01] -rw------- 1 boinc boinc   1348298 Jun  6 01:33 log.44871837._097815.job.log.1
[2025-06-06 01:43:01] -rw------- 1 boinc boinc       357 Jun  6 01:33 output.list
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc       620 Jun  6 01:33 runtime_log
[2025-06-06 01:43:01] -rw------- 1 boinc boinc   1710080 Jun  6 01:33 result.tar.gz
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc      9026 Jun  6 01:33 runtime_log.err
[2025-06-06 01:43:01] -rw------- 1 boinc boinc       664 Jun  6 01:33 kF0KDmX6ne7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgwUKDmJNksjn.diag
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc        26 Jun  6 01:42 wrapper_checkpoint.txt
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc      8192 Jun  6 01:43 boinc_mmap_file
[2025-06-06 01:43:01] -rw-r--r-- 1 boinc boinc     20945 Jun  6 01:43 stderr.txt
[2025-06-06 01:43:01] HITS file was successfully produced:
[2025-06-06 01:43:01] -rw------- 1 boinc boinc 194002100 Jun  6 01:32 shared/HITS.pool.root.1
[2025-06-06 01:43:01]  *** Contents of shared directory: ***
[2025-06-06 01:43:01] total 414440
[2025-06-06 01:43:01] -rw-r--r-- 2 boinc boinc 228138706 Jun  5 21:31 ATLAS.root_0
[2025-06-06 01:43:01] -rw-r--r-- 2 boinc boinc    508875 Jun  5 21:31 input.tar.gz
[2025-06-06 01:43:01] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:31 start_atlas.sh
[2025-06-06 01:43:01] -rw------- 1 boinc boinc 194002100 Jun  6 01:32 HITS.pool.root.1
[2025-06-06 01:43:01] -rw------- 1 boinc boinc   1710080 Jun  6 01:33 result.tar.gz
01:43:03 (3751390): run_atlas exited; CPU time 56388.829035
01:43:03 (3751390): called boinc_finish(0)

</stderr_txt>
]]>

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