Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:12 (20003): wrapper (7.7.26015): starting
09:04:12 (20003): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 09:04:12] Arguments: --nthreads 8
[2025-05-30 09:04:12] Threads: 8
[2025-05-30 09:04:12] Checking for CVMFS
[2025-05-30 09:04:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 09:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 09:04:13] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 09:04:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 09:04:14] 2.11.2.0 1855 25691 95952 146590 0 59 22917437 25165825 4637 130560 0 14300253 99.819 14867339 1829 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 09:04:14] CVMFS is ok
[2025-05-30 09:04:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 09:04:14] Checking for apptainer binary...
[2025-05-30 09:04:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 09:04:15] Running /usr/bin/apptainer --version
[2025-05-30 09:04:15] apptainer version 1.3.2-1.el7
[2025-05-30 09:04:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 09:34:49] cg-vwn348.simple-grid.lan
[2025-05-30 09:34:49] apptainer works
[2025-05-30 09:34:49] Set ATHENA_PROC_NUMBER=8
[2025-05-30 09:34:49] Set ATHENA_CORE_NUMBER=8
[2025-05-30 09:34:49] Starting ATLAS job with PandaID=6672387631
[2025-05-30 09:34:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 18:02:03]  *** The last 200 lines of the pilot log: ***
[2025-05-30 18:02:03] 2025-05-30 13:03:47,710 | INFO     | extracted standard info from prmon json
[2025-05-30 18:02:03] 2025-05-30 13:03:47,711 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 18:02:03] 2025-05-30 13:03:47,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 18:02:03] 2025-05-30 13:03:47,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 18:02:03] 2025-05-30 13:03:47,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 18:02:03] 2025-05-30 13:03:47,717 | INFO     | fitting pss+swap vs Time
[2025-05-30 18:02:03] 2025-05-30 13:03:47,718 | INFO     | sum of square deviations: 9237596457.5
[2025-05-30 18:02:03] 2025-05-30 13:03:47,727 | INFO     | sum of deviations: 122900315622.49998
[2025-05-30 18:02:03] 2025-05-30 13:03:47,728 | INFO     | mean x: 1748600607.5
[2025-05-30 18:02:03] 2025-05-30 13:03:47,728 | INFO     | mean y: 2466426.5903225807
[2025-05-30 18:02:03] 2025-05-30 13:03:47,728 | INFO     | -- intersect: -23261546842.24706
[2025-05-30 18:02:03] 2025-05-30 13:03:47,728 | INFO     | intersect: -23261546842.24706
[2025-05-30 18:02:03] 2025-05-30 13:03:47,728 | INFO     | chi2: 7.141562018167484
[2025-05-30 18:02:03] 2025-05-30 13:03:47,729 | INFO     | sum of square deviations: 8797783560.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,732 | INFO     | sum of deviations: 141145269130.99997
[2025-05-30 18:02:03] 2025-05-30 13:03:47,732 | INFO     | mean x: 1748600455.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,732 | INFO     | mean y: 2472659.718032787
[2025-05-30 18:02:03] 2025-05-30 13:03:47,732 | INFO     | -- intersect: -28050806912.38865
[2025-05-30 18:02:03] 2025-05-30 13:03:47,733 | INFO     | intersect: -28050806912.38865
[2025-05-30 18:02:03] 2025-05-30 13:03:47,733 | INFO     | chi2: 6.419607112058614
[2025-05-30 18:02:03] 2025-05-30 13:03:47,733 | INFO     | current chi2=6.419607112058614 (change=10.109201660256991 %)
[2025-05-30 18:02:03] 2025-05-30 13:03:47,733 | INFO     | right removable region: 304
[2025-05-30 18:02:03] 2025-05-30 13:03:47,734 | INFO     | sum of square deviations: 8797783560.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,737 | INFO     | sum of deviations: 13837609782.000008
[2025-05-30 18:02:03] 2025-05-30 13:03:47,737 | INFO     | mean x: 1748600760.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,737 | INFO     | mean y: 2504220.0032786885
[2025-05-30 18:02:03] 2025-05-30 13:03:47,737 | INFO     | -- intersect: -2747785647.4811006
[2025-05-30 18:02:03] 2025-05-30 13:03:47,737 | INFO     | intersect: -2747785647.4811006
[2025-05-30 18:02:03] 2025-05-30 13:03:47,738 | INFO     | chi2: 2.355796562794811
[2025-05-30 18:02:03] 2025-05-30 13:03:47,738 | INFO     | current chi2=2.355796562794811 (change=67.01286697781411 %)
[2025-05-30 18:02:03] 2025-05-30 13:03:47,739 | INFO     | sum of square deviations: 8372156975.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,741 | INFO     | sum of deviations: -40815056385.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,742 | INFO     | mean x: 1748600912.5
[2025-05-30 18:02:03] 2025-05-30 13:03:47,742 | INFO     | mean y: 2523712.2533333334
[2025-05-30 18:02:03] 2025-05-30 13:03:47,742 | INFO     | -- intersect: 8527118395.757813
[2025-05-30 18:02:03] 2025-05-30 13:03:47,742 | INFO     | intersect: 8527118395.757813
[2025-05-30 18:02:03] 2025-05-30 13:03:47,743 | INFO     | chi2: 0.9213037876324606
[2025-05-30 18:02:03] 2025-05-30 13:03:47,743 | INFO     | current chi2=0.9213037876324606 (change=60.892048057856606 %)
[2025-05-30 18:02:03] 2025-05-30 13:03:47,743 | INFO     | sum of square deviations: 7960484140.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,751 | INFO     | sum of deviations: -41457463428.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,752 | INFO     | mean x: 1748601065.0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,752 | INFO     | mean y: 2523927.3186440677
[2025-05-30 18:02:03] 2025-05-30 13:03:47,752 | INFO     | -- intersect: 9109076170.559385
[2025-05-30 18:02:03] 2025-05-30 13:03:47,752 | INFO     | intersect: 9109076170.559385
[2025-05-30 18:02:03] 2025-05-30 13:03:47,752 | INFO     | chi2: 0.9018032701514225
[2025-05-30 18:02:03] 2025-05-30 13:03:47,753 | INFO     | current chi2=0.9018032701514225 (change=2.116621872482469 %)
[2025-05-30 18:02:03] 2025-05-30 13:03:47,753 | INFO     | left removable region: 30
[2025-05-30 18:02:03] 2025-05-30 13:03:47,753 | INFO     | sum of square deviations: 6378584712.5
[2025-05-30 18:02:03] 2025-05-30 13:03:47,756 | INFO     | sum of deviations: 6949712645.499999
[2025-05-30 18:02:03] 2025-05-30 13:03:47,756 | INFO     | mean x: 1748601339.5
[2025-05-30 18:02:03] 2025-05-30 13:03:47,756 | INFO     | mean y: 2519711.682481752
[2025-05-30 18:02:03] 2025-05-30 13:03:47,756 | INFO     | -- intersect: -1902648501.7688162
[2025-05-30 18:02:03] 2025-05-30 13:03:47,756 | INFO     | intersect: -1902648501.7688162
[2025-05-30 18:02:03] 2025-05-30 13:03:47,757 | INFO     | chi2: 0.012793495077456196
[2025-05-30 18:02:03] 2025-05-30 13:03:47,757 | INFO     | -- intersect: -1902648501.7688162
[2025-05-30 18:02:03] 2025-05-30 13:03:47,757 | INFO     | current memory leak: 1.09 B/s (using 274 data points, chi2=0.01)
[2025-05-30 18:02:03] 2025-05-30 13:03:47,758 | INFO     | ..............................
[2025-05-30 18:02:03] 2025-05-30 13:03:47,758 | INFO     | . Timing measurements:
[2025-05-30 18:02:03] 2025-05-30 13:03:47,758 | INFO     | . get job = 0 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,758 | INFO     | . initial setup = 9 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,758 | INFO     | . payload setup = 153 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,759 | INFO     | . stage-in = 0 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,759 | INFO     | . payload execution = 19010 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,759 | INFO     | . stage-out = 87 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,759 | INFO     | . log creation = 0 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,759 | INFO     | ..............................
[2025-05-30 18:02:03] 2025-05-30 13:03:47,950 | INFO     | 
[2025-05-30 18:02:03] 2025-05-30 13:03:47,950 | INFO     | job summary report
[2025-05-30 18:02:03] 2025-05-30 13:03:47,950 | INFO     | --------------------------------------------------
[2025-05-30 18:02:03] 2025-05-30 13:03:47,950 | INFO     | PanDA job id: 6672387631
[2025-05-30 18:02:03] 2025-05-30 13:03:47,950 | INFO     | task id: 44871837
[2025-05-30 18:02:03] 2025-05-30 13:03:47,950 | INFO     | errors: (none)
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | pilot state: finished 
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | transexitcode: 0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | exeerrorcode: 0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | exeerrordiag: 
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | exitcode: 0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | exitmsg: OK
[2025-05-30 18:02:03] 2025-05-30 13:03:47,951 | INFO     | cpuconsumptiontime: 70497 s
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | nevents: 400
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | neventsw: 0
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | pid: 16734
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | pgrp: 16734
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | corecount: 8
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | event service: False
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | sizes: {0: 2404958, 1: 2405213, 12: 2405213, 23: 2405241, 34: 2405269, 44: 2405297, 55: 2405453, 66: 2405481, 77: 2405509, 87: 2405771, 98: 2405799, 19167: 2438016
[2025-05-30 18:02:03] 2025-05-30 13:03:47,952 | INFO     | --------------------------------------------------
[2025-05-30 18:02:03] 2025-05-30 13:03:47,953 | INFO     | 
[2025-05-30 18:02:03] 2025-05-30 13:03:47,953 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-30 18:02:03] 2025-05-30 13:03:48,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 18:02:03] 2025-05-30 13:03:48,239 | INFO     | job 6672387631 has completed (purged errors)
[2025-05-30 18:02:03] 2025-05-30 13:03:48,240 | INFO     | overall cleanup function is called
[2025-05-30 18:02:03] 2025-05-30 13:03:49,250 | INFO     | --- collectZombieJob: --- 10, [16734]
[2025-05-30 18:02:03] 2025-05-30 13:03:49,250 | INFO     | zombie collector waiting for pid 16734
[2025-05-30 18:02:03] 2025-05-30 13:03:49,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 18:02:03] 2025-05-30 13:03:49,250 | INFO     | collected zombie processes
[2025-05-30 18:02:03] 2025-05-30 13:03:49,250 | INFO     | will attempt to kill all subprocesses of pid=16734
[2025-05-30 18:02:03] 2025-05-30 13:03:49,377 | INFO     | process IDs to be killed: [16734] (in reverse order)
[2025-05-30 18:02:03] 2025-05-30 13:03:50,099 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 18:02:03] 2025-05-30 13:03:50,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 18:02:03] 2025-05-30 13:03:50,102 | INFO     | did not find any defunct processes belonging to 16734
[2025-05-30 18:02:03] 2025-05-30 13:03:50,105 | INFO     | did not find any defunct processes belonging to 16734
[2025-05-30 18:02:03] 2025-05-30 13:03:50,106 | INFO     | ready for new job
[2025-05-30 18:02:03] 2025-05-30 13:03:50,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 18:02:03] 2025-05-30 13:03:50,108 | INFO     | **************************************
[2025-05-30 18:02:03] 2025-05-30 13:03:50,108 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 18:02:03] 2025-05-30 13:03:50,108 | INFO     | **************************************
[2025-05-30 18:02:03] 2025-05-30 13:03:50,108 | INFO     | 
[2025-05-30 18:02:03] 2025-05-30 13:03:50,109 | INFO     | pilot is running in a VM
[2025-05-30 18:02:03] 2025-05-30 13:03:50,109 | INFO     | architecture information:
[2025-05-30 18:02:03] 2025-05-30 13:03:50,123 | INFO     | executing command: cat /etc/os-release
[2025-05-30 18:02:03] 2025-05-30 13:03:50,387 | INFO     | cat /etc/os-release:
[2025-05-30 18:02:03] NAME="CentOS Linux"
[2025-05-30 18:02:03] VERSION="7 (Core)"
[2025-05-30 18:02:03] ID="centos"
[2025-05-30 18:02:03] ID_LIKE="rhel fedora"
[2025-05-30 18:02:03] VERSION_ID="7"
[2025-05-30 18:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 18:02:03] ANSI_COLOR="0;31"
[2025-05-30 18:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 18:02:03] HOME_URL="https://www.centos.org/"
[2025-05-30 18:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 18:02:03] 
[2025-05-30 18:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 18:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 18:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 18:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 18:02:03] 
[2025-05-30 18:02:03] 2025-05-30 13:03:50,388 | INFO     | **************************************
[2025-05-30 18:02:03] 2025-05-30 13:03:50,892 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-30 18:02:03] 2025-05-30 13:03:51,096 | INFO     | sufficient remaining disk space (496623419392 B)
[2025-05-30 18:02:03] 2025-05-30 13:03:51,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 18:02:03] 2025-05-30 13:03:51,097 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 18:02:03] 2025-05-30 13:03:51,097 | INFO     | update_server=False
[2025-05-30 18:02:03] 2025-05-30 13:03:51,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 18:02:03] 2025-05-30 13:03:51,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 18:02:03] 2025-05-30 13:03:51,104 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 18:02:03] 2025-05-30 13:03:51,104 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 18:02:03] 2025-05-30 13:03:51,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 18:02:03] 2025-05-30 13:03:51,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 18:02:03] 2025-05-30 13:03:51,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 18:02:03] 2025-05-30 13:03:51,114 | INFO     | aborting loop
[2025-05-30 18:02:03] 2025-05-30 13:03:51,294 | INFO     | all data control threads have been joined
[2025-05-30 18:02:03] 2025-05-30 13:03:51,754 | INFO     | all payload control threads have been joined
[2025-05-30 18:02:03] 2025-05-30 13:03:52,103 | INFO     | [job] retrieve thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 18:02:03] 2025-05-30 13:03:52,120 | INFO     | [job] job monitor thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,213 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,300 | INFO     | [data] control thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,760 | INFO     | [payload] control thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,771 | INFO     | all job control threads have been joined
[2025-05-30 18:02:03] 2025-05-30 13:03:52,780 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,824 | INFO     | [job] validate thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:52,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 18:02:03] 2025-05-30 13:03:53,350 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:53,498 | INFO     | [data] copytool_in thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:53,586 | INFO     | [payload] validate_post thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:53,599 | INFO     | [payload] failed_post thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:53,778 | INFO     | [job] control thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:53,970 | INFO     | [job] queue monitor thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:54,112 | INFO     | [data] copytool_out thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:55,109 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 18:02:03] 2025-05-30 13:03:56,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778337343296)>', '<ExcThread(monitor, started 139777756096256)>']
[2025-05-30 18:02:03] 2025-05-30 13:03:57,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 18:02:03] 2025-05-30 13:03:57,147 | INFO     | [monitor] control thread has ended
[2025-05-30 18:02:03] 2025-05-30 13:04:01,441 | INFO     | all workflow threads have been joined
[2025-05-30 18:02:03] 2025-05-30 13:04:01,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 18:02:03] 2025-05-30 13:04:01,441 | INFO     | traces error code: 0
[2025-05-30 18:02:03] 2025-05-30 13:04:01,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 18:02:03] 2025-05-30 13:04:01,859 [wrapper] ==== pilot stdout END ====
[2025-05-30 18:02:03] 2025-05-30 13:04:01,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 18:02:03] 2025-05-30 13:04:02,078 [wrapper] pilotpid: 10063
[2025-05-30 18:02:03] 2025-05-30 13:04:02,189 [wrapper] Pilot exit status: 0
[2025-05-30 18:02:03] 2025-05-30 13:04:02,625 [wrapper] pandaids: 6672387631
[2025-05-30 18:02:03] 2025-05-30 13:04:03,476 [wrapper] cleanup supervisor_pilot 12004 10064
[2025-05-30 18:02:03] 2025-05-30 13:04:03,582 [wrapper] Test setup, not cleaning
[2025-05-30 18:02:03] 2025-05-30 13:04:03,655 [wrapper] apfmon messages muted
[2025-05-30 18:02:03] 2025-05-30 13:04:03,691 [wrapper] ==== wrapper stdout END ====
[2025-05-30 18:02:03] 2025-05-30 13:04:03,748 [wrapper] ==== wrapper stderr END ====
[2025-05-30 18:02:03]  *** Error codes and diagnostics ***
[2025-05-30 18:02:03]     "exeErrorCode": 0,
[2025-05-30 18:02:03]     "exeErrorDiag": "",
[2025-05-30 18:02:03]     "pilotErrorCode": 0,
[2025-05-30 18:02:03]     "pilotErrorDiag": "",
[2025-05-30 18:02:03]  *** Listing of results directory ***
[2025-05-30 18:02:03] total 427772
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc    495897 May 29 15:24 pilot3.tar.gz
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc      5111 May 29 15:46 queuedata.json
[2025-05-30 18:02:03] -rwx------. 1 boinc boinc     37140 May 29 15:46 runpilot2-wrapper.sh
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc       100 May 30 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 18:02:03] -rwxr-xr-x. 1 boinc boinc      7986 May 30 09:04 run_atlas
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc       105 May 30 09:04 job.xml
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc      6372 May 30 09:04 init_data.xml
[2025-05-30 18:02:03] -rw-r--r--. 2 boinc boinc 225731826 May 30 09:04 EVNT.44871834._003485.pool.root.1
[2025-05-30 18:02:03] -rw-r--r--. 2 boinc boinc     15093 May 30 09:04 start_atlas.sh
[2025-05-30 18:02:03] drwxrwx--x. 2 boinc boinc        68 May 30 09:04 shared
[2025-05-30 18:02:03] -rw-r--r--. 2 boinc boinc    508885 May 30 09:04 input.tar.gz
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc         0 May 30 09:04 boinc_lockfile
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc      2559 May 30 09:34 pandaJob.out
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc    992366 May 30 09:38 agis_schedconf.cvmfs.json
[2025-05-30 18:02:03] drwx------. 4 boinc boinc      4096 May 30 09:38 pilot3
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc 204299188 May 30 14:59 HITS.44871837._100964.pool.root.1
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc       531 May 30 14:59 boinc_task_state.xml
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc      1022 May 30 15:00 memory_monitor_summary.json
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc   1603667 May 30 15:00 agis_ddmendpoints.agis.ALL.json
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc    432494 May 30 15:02 log.44871837._100964.job.log.tgz.1
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc        95 May 30 15:03 pilot_heartbeat.json
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc      7696 May 30 15:03 heartbeat.json
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc      4540 May 30 15:04 pilotlog.txt
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc   1657982 May 30 15:04 log.44871837._100964.job.log.1
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc       357 May 30 15:04 output.list
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc       620 May 30 15:04 runtime_log
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc   2109440 May 30 15:04 result.tar.gz
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc       657 May 30 15:04 tsfKDm6lse7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjKVKDmWXAhsm.diag
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc      8673 May 30 15:04 runtime_log.err
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc      8192 May 30 18:02 boinc_mmap_file
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc        28 May 30 18:02 wrapper_checkpoint.txt
[2025-05-30 18:02:03] -rw-r--r--. 1 boinc boinc     20519 May 30 18:02 stderr.txt
[2025-05-30 18:02:03] HITS file was successfully produced:
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc 204299188 May 30 14:59 shared/HITS.pool.root.1
[2025-05-30 18:02:03]  *** Contents of shared directory: ***
[2025-05-30 18:02:03] total 422532
[2025-05-30 18:02:03] -rw-r--r--. 2 boinc boinc 225731826 May 30 09:04 ATLAS.root_0
[2025-05-30 18:02:03] -rw-r--r--. 2 boinc boinc     15093 May 30 09:04 start_atlas.sh
[2025-05-30 18:02:03] -rw-r--r--. 2 boinc boinc    508885 May 30 09:04 input.tar.gz
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc 204299188 May 30 14:59 HITS.pool.root.1
[2025-05-30 18:02:03] -rw-------. 1 boinc boinc   2109440 May 30 15:04 result.tar.gz
18:02:05 (20003): run_atlas exited; CPU time 70774.490188
18:02:05 (20003): called boinc_finish(0)

</stderr_txt>
]]>

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