Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:10 (2819738): wrapper (7.7.26015): starting
17:20:10 (2819738): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 17:20:10] Arguments: --nthreads 12
[2025-05-29 17:20:10] Threads: 12
[2025-05-29 17:20:10] Checking for CVMFS
[2025-05-29 17:20:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 17:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 17:20:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 17:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 17:20:11] 2.12.6.0 8433 23393 425920 146575 0 492 22225880 40960000 12958 16776704 1 69336546 99.588 76927244 24165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-29 17:20:11] CVMFS is ok
[2025-05-29 17:20:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 17:20:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 17:20:11] Further information can be found at the LHC@home message board.
[2025-05-29 17:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 17:20:11] Checking for apptainer binary...
[2025-05-29 17:20:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 17:20:11] Running /usr/bin/apptainer --version
[2025-05-29 17:20:11] apptainer version 1.4.1-1.el9
[2025-05-29 17:20:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 17:20:11] c6-5-7-1.aglt2.org
[2025-05-29 17:20:11] apptainer works
[2025-05-29 17:20:11] Set ATHENA_PROC_NUMBER=12
[2025-05-29 17:20:11] Set ATHENA_CORE_NUMBER=12
[2025-05-29 17:20:11] Starting ATLAS job with PandaID=6669945370
[2025-05-29 17:20:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 18:53:01]  *** The last 200 lines of the pilot log: ***
[2025-05-29 18:53:02]  filetype=log
[2025-05-29 18:53:02]  guid=ae2fbf07-a1e5-403e-a1ec-49c29f379e44
[2025-05-29 18:53:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-29 18:53:02]  is_altstaged=None
[2025-05-29 18:53:02]  is_tar=False
[2025-05-29 18:53:02]  lfn=log.44871837._098291.job.log.tgz.1
[2025-05-29 18:53:02]  mtime=0
[2025-05-29 18:53:02]  protocol_id=None
[2025-05-29 18:53:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-29 18:53:02]  replicas=None
[2025-05-29 18:53:02]  scope=mc23_13p6TeV
[2025-05-29 18:53:02]  status=None
[2025-05-29 18:53:02]  status_code=0
[2025-05-29 18:53:02]  storage_token=
[2025-05-29 18:53:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669945370/log.44871837._098291.job.log.tgz.1
[2025-05-29 18:53:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/b9/log.44871837._098291.job.log.tgz.1
[2025-05-29 18:53:02]  workdir=None
[2025-05-29 18:53:02] ]
[2025-05-29 18:53:02] 2025-05-29 22:52:44,792 | INFO     | transferring file log.44871837._098291.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669945370/log.44871837._098291.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-29 18:53:02] 2025-05-29 22:52:44,792 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669945370/log.44871837._098291.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._098291.job
[2025-05-29 18:53:02] 2025-05-29 22:52:44,806 | INFO     | adding to output.list: log.44871837._098291.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/b9/log.44871837._098291.job.log.tg
[2025-05-29 18:53:02] 2025-05-29 22:52:44,807 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-29 18:53:02] 2025-05-29 22:52:44,808 | INFO     | summary of transferred files:
[2025-05-29 18:53:02] 2025-05-29 22:52:44,808 | INFO     |  -- lfn=log.44871837._098291.job.log.tgz.1, status_code=0, status=transferred
[2025-05-29 18:53:02] 2025-05-29 22:52:44,808 | INFO     | stage-out finished correctly
[2025-05-29 18:53:02] 2025-05-29 22:52:44,841 | INFO     | monitor loop #397: job 0:6669945370 is in state 'finished'
[2025-05-29 18:53:02] 2025-05-29 22:52:44,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 18:53:02] 2025-05-29 22:52:44,906 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-29 18:53:02] 2025-05-29 22:52:45,079 | INFO     | job 6669945370 has state=finished
[2025-05-29 18:53:02] 2025-05-29 22:52:45,079 | INFO     | preparing for final server update for job 6669945370 in state='finished'
[2025-05-29 18:53:02] 2025-05-29 22:52:45,180 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-29 18:53:02] 2025-05-29 22:52:45,180 | INFO     | this job has now completed (state=finished)
[2025-05-29 18:53:02] 2025-05-29 22:52:45,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-29 18:53:02] 2025-05-29 22:52:45,181 | INFO     | log transfer has been attempted: DONE
[2025-05-29 18:53:02] 2025-05-29 22:52:45,181 | INFO     | job 6669945370 has finished - writing final server update
[2025-05-29 18:53:02] 2025-05-29 22:52:45,181 | INFO     | total number of processed events: 400 (read)
[2025-05-29 18:53:02] 2025-05-29 22:52:45,198 | INFO     | executing command: lscpu
[2025-05-29 18:53:02] 2025-05-29 22:52:45,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-29 18:53:02] 2025-05-29 22:52:47,370 | INFO     | monitor loop #398: job 0:6669945370 is in state 'finished'
[2025-05-29 18:53:02] 2025-05-29 22:52:47,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 18:53:02] 2025-05-29 22:52:49,149 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 18:53:02] 2025-05-29 22:52:49,149 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669945370/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 18:53:02] 2025-05-29 22:52:49,150 | INFO     | extracted standard info from prmon json
[2025-05-29 18:53:02] 2025-05-29 22:52:49,151 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 18:53:02] 2025-05-29 22:52:49,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 18:53:02] 2025-05-29 22:52:49,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 18:53:02] 2025-05-29 22:52:49,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 18:53:02] 2025-05-29 22:52:49,153 | INFO     | fitting pss+swap vs Time
[2025-05-29 18:53:02] 2025-05-29 22:52:49,153 | INFO     | sum of square deviations: 183760000.95238084
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | sum of deviations: -16046187890.047623
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | mean x: 1748556484.5238094
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | mean y: 2524759.523809524
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | -- intersect: 152688994837.96594
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | intersect: 152688994837.96594
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | chi2: 0.4032189609630356
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | -- intersect: 152688994837.96594
[2025-05-29 18:53:02] 2025-05-29 22:52:49,154 | INFO     | current memory leak: -87.32 B/s (using 84 data points, chi2=0.40)
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | ..............................
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . Timing measurements:
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . get job = 0 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . initial setup = 2 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . payload setup = 6 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . stage-in = 0 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . payload execution = 5516 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . stage-out = 0 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | . log creation = 0 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,155 | INFO     | ..............................
[2025-05-29 18:53:02] 2025-05-29 22:52:49,240 | INFO     | 
[2025-05-29 18:53:02] 2025-05-29 22:52:49,240 | INFO     | job summary report
[2025-05-29 18:53:02] 2025-05-29 22:52:49,240 | INFO     | --------------------------------------------------
[2025-05-29 18:53:02] 2025-05-29 22:52:49,240 | INFO     | PanDA job id: 6669945370
[2025-05-29 18:53:02] 2025-05-29 22:52:49,240 | INFO     | task id: 44871837
[2025-05-29 18:53:02] 2025-05-29 22:52:49,240 | INFO     | errors: (none)
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | pilot state: finished 
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | transexitcode: 0
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | exeerrorcode: 0
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | exeerrordiag: 
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | exitcode: 0
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | exitmsg: OK
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | cpuconsumptiontime: 51318 s
[2025-05-29 18:53:02] 2025-05-29 22:52:49,241 | INFO     | nevents: 400
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | neventsw: 0
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | pid: 2830679
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | pgrp: 2830679
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | corecount: 12
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | event service: False
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 12: 2405446, 5526: 2432001, 5528: 2441126, 5532: 2441240}
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | --------------------------------------------------
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | 
[2025-05-29 18:53:02] 2025-05-29 22:52:49,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | job 6669945370 has completed (purged errors)
[2025-05-29 18:53:02] 2025-05-29 22:52:49,268 | INFO     | overall cleanup function is called
[2025-05-29 18:53:02] 2025-05-29 22:52:50,275 | INFO     | --- collectZombieJob: --- 10, [2830679]
[2025-05-29 18:53:02] 2025-05-29 22:52:50,276 | INFO     | zombie collector waiting for pid 2830679
[2025-05-29 18:53:02] 2025-05-29 22:52:50,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 18:53:02] 2025-05-29 22:52:50,276 | INFO     | collected zombie processes
[2025-05-29 18:53:02] 2025-05-29 22:52:50,276 | INFO     | will attempt to kill all subprocesses of pid=2830679
[2025-05-29 18:53:02] 2025-05-29 22:52:50,547 | INFO     | process IDs to be killed: [2830679] (in reverse order)
[2025-05-29 18:53:02] 2025-05-29 22:52:50,636 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 18:53:02] 2025-05-29 22:52:50,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 18:53:02] 2025-05-29 22:52:50,647 | INFO     | did not find any defunct processes belonging to 2830679
[2025-05-29 18:53:02] 2025-05-29 22:52:50,658 | INFO     | did not find any defunct processes belonging to 2830679
[2025-05-29 18:53:02] 2025-05-29 22:52:50,658 | INFO     | ready for new job
[2025-05-29 18:53:02] 2025-05-29 22:52:50,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 18:53:02] 2025-05-29 22:52:50,660 | INFO     | **************************************
[2025-05-29 18:53:02] 2025-05-29 22:52:50,660 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 18:53:02] 2025-05-29 22:52:50,660 | INFO     | **************************************
[2025-05-29 18:53:02] 2025-05-29 22:52:50,660 | INFO     | 
[2025-05-29 18:53:02] 2025-05-29 22:52:50,675 | INFO     | architecture information:
[2025-05-29 18:53:02] 2025-05-29 22:52:50,676 | INFO     | executing command: cat /etc/os-release
[2025-05-29 18:53:02] 2025-05-29 22:52:50,694 | INFO     | cat /etc/os-release:
[2025-05-29 18:53:02] NAME="CentOS Linux"
[2025-05-29 18:53:02] VERSION="7 (Core)"
[2025-05-29 18:53:02] ID="centos"
[2025-05-29 18:53:02] ID_LIKE="rhel fedora"
[2025-05-29 18:53:02] VERSION_ID="7"
[2025-05-29 18:53:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 18:53:02] ANSI_COLOR="0;31"
[2025-05-29 18:53:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 18:53:02] HOME_URL="https://www.centos.org/"
[2025-05-29 18:53:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 18:53:02] 
[2025-05-29 18:53:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 18:53:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 18:53:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 18:53:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 18:53:02] 
[2025-05-29 18:53:02] 2025-05-29 22:52:50,694 | INFO     | **************************************
[2025-05-29 18:53:02] 2025-05-29 22:52:51,197 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-29 18:53:02] 2025-05-29 22:52:51,214 | INFO     | sufficient remaining disk space (75301388288 B)
[2025-05-29 18:53:02] 2025-05-29 22:52:51,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 18:53:02] 2025-05-29 22:52:51,215 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 18:53:02] 2025-05-29 22:52:51,215 | INFO     | update_server=False
[2025-05-29 18:53:02] 2025-05-29 22:52:51,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 18:53:02] 2025-05-29 22:52:51,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 18:53:02] 2025-05-29 22:52:51,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 18:53:02] 2025-05-29 22:52:51,215 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 18:53:02] 2025-05-29 22:52:51,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 18:53:02] 2025-05-29 22:52:51,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 18:53:02] 2025-05-29 22:52:51,217 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 18:53:02] 2025-05-29 22:52:51,217 | INFO     | aborting loop
[2025-05-29 18:53:02] 2025-05-29 22:52:51,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 18:53:02] 2025-05-29 22:52:51,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 18:53:02] 2025-05-29 22:52:51,356 | INFO     | all job control threads have been joined
[2025-05-29 18:53:02] 2025-05-29 22:52:51,536 | INFO     | all data control threads have been joined
[2025-05-29 18:53:02] 2025-05-29 22:52:51,863 | INFO     | all payload control threads have been joined
[2025-05-29 18:53:02] 2025-05-29 22:52:52,220 | INFO     | [job] retrieve thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,221 | INFO     | [job] queue monitor thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,223 | INFO     | [job] job monitor thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,360 | INFO     | [job] control thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,536 | INFO     | [data] control thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,855 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,868 | INFO     | [payload] control thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:52,920 | INFO     | [job] validate thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,162 | INFO     | [payload] failed_post thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,222 | INFO     | [data] copytool_out thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,421 | INFO     | [data] copytool_in thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,704 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,711 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:53,737 | INFO     | [payload] validate_post thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:55,222 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 18:53:02] 2025-05-29 22:52:56,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346804614976)>', '<ExcThread(monitor, started 140346168174336)>']
[2025-05-29 18:53:02] 2025-05-29 22:52:57,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 18:53:02] 2025-05-29 22:52:57,248 | INFO     | [monitor] control thread has ended
[2025-05-29 18:53:02] 2025-05-29 22:53:01,692 | INFO     | all workflow threads have been joined
[2025-05-29 18:53:02] 2025-05-29 22:53:01,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 18:53:02] 2025-05-29 22:53:01,693 | INFO     | traces error code: 0
[2025-05-29 18:53:02] 2025-05-29 22:53:01,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 18:53:02] 2025-05-29 22:53:01,875 [wrapper] ==== pilot stdout END ====
[2025-05-29 18:53:02] 2025-05-29 22:53:01,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 18:53:02] 2025-05-29 22:53:01,881 [wrapper] pilotpid: 2823304
[2025-05-29 18:53:02] 2025-05-29 22:53:01,883 [wrapper] Pilot exit status: 0
[2025-05-29 18:53:02] 2025-05-29 22:53:01,891 [wrapper] pandaids: 6669945370
[2025-05-29 18:53:02] 2025-05-29 22:53:01,937 [wrapper] cleanup supervisor_pilot 3300494 2823305
[2025-05-29 18:53:02] 2025-05-29 22:53:01,939 [wrapper] Test setup, not cleaning
[2025-05-29 18:53:02] 2025-05-29 22:53:01,942 [wrapper] apfmon messages muted
[2025-05-29 18:53:02] 2025-05-29 22:53:01,944 [wrapper] ==== wrapper stdout END ====
[2025-05-29 18:53:02] 2025-05-29 22:53:01,946 [wrapper] ==== wrapper stderr END ====
[2025-05-29 18:53:02]  *** Error codes and diagnostics ***
[2025-05-29 18:53:02]     "exeErrorCode": 0,
[2025-05-29 18:53:02]     "exeErrorDiag": "",
[2025-05-29 18:53:02]     "pilotErrorCode": 0,
[2025-05-29 18:53:02]     "pilotErrorDiag": "",
[2025-05-29 18:53:02]  *** Listing of results directory ***
[2025-05-29 18:53:02] total 414456
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas    495897 May 29 05:21 pilot3.tar.gz
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas      5111 May 29 05:25 queuedata.json
[2025-05-29 18:53:02] -rwx------. 1 boincer umatlas     37140 May 29 05:27 runpilot2-wrapper.sh
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas       100 May 29 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 18:53:02] -rwxr-xr-x. 1 boincer umatlas      7986 May 29 17:20 run_atlas
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas       105 May 29 17:20 job.xml
[2025-05-29 18:53:02] -rw-r--r--. 2 boincer umatlas 222527253 May 29 17:20 EVNT.44871834._002474.pool.root.1
[2025-05-29 18:53:02] -rw-r--r--. 2 boincer umatlas     15093 May 29 17:20 start_atlas.sh
[2025-05-29 18:53:02] drwxrwx--x. 2 boincer umatlas      4096 May 29 17:20 shared
[2025-05-29 18:53:02] -rw-r--r--. 2 boincer umatlas    508885 May 29 17:20 input.tar.gz
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas         0 May 29 17:20 boinc_lockfile
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas      2559 May 29 17:20 pandaJob.out
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas    992350 May 29 17:20 agis_schedconf.cvmfs.json
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas   1603667 May 29 17:20 agis_ddmendpoints.agis.ALL.json
[2025-05-29 18:53:02] drwx------. 4 boincer umatlas      4096 May 29 17:20 pilot3
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas      6839 May 29 18:45 init_data.xml
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas        95 May 29 18:51 pilot_heartbeat.json
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas 196238903 May 29 18:52 HITS.44871837._098291.pool.root.1
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas       530 May 29 18:52 boinc_task_state.xml
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas      1043 May 29 18:52 memory_monitor_summary.json
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas    366966 May 29 18:52 log.44871837._098291.job.log.tgz.1
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas      8192 May 29 18:52 boinc_mmap_file
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas        27 May 29 18:52 wrapper_checkpoint.txt
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas      7722 May 29 18:52 heartbeat.json
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas      4476 May 29 18:53 pilotlog.txt
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas    532041 May 29 18:53 log.44871837._098291.job.log.1
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas       357 May 29 18:53 output.list
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas       620 May 29 18:53 runtime_log
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas    921600 May 29 18:53 result.tar.gz
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas      8661 May 29 18:53 runtime_log.err
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas       656 May 29 18:53 7htKDmwioe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrGeKDmWLK9Ln.diag
[2025-05-29 18:53:02] -rw-r--r--. 1 boincer umatlas     21252 May 29 18:53 stderr.txt
[2025-05-29 18:53:02] HITS file was successfully produced:
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas 196238903 May 29 18:52 shared/HITS.pool.root.1
[2025-05-29 18:53:02]  *** Contents of shared directory: ***
[2025-05-29 18:53:02] total 410372
[2025-05-29 18:53:02] -rw-r--r--. 2 boincer umatlas 222527253 May 29 17:20 ATLAS.root_0
[2025-05-29 18:53:02] -rw-r--r--. 2 boincer umatlas     15093 May 29 17:20 start_atlas.sh
[2025-05-29 18:53:02] -rw-r--r--. 2 boincer umatlas    508885 May 29 17:20 input.tar.gz
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas 196238903 May 29 18:52 HITS.pool.root.1
[2025-05-29 18:53:02] -rw-------. 1 boincer umatlas    921600 May 29 18:53 result.tar.gz
18:53:03 (2819738): run_atlas exited; CPU time 51438.130733
18:53:03 (2819738): called boinc_finish(0)

</stderr_txt>
]]>

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