Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:28:34 (1394750): wrapper (7.7.26015): starting
03:28:34 (1394750): wrapper: running run_atlas (--nthreads 12)
[2025-05-31 03:28:34] Arguments: --nthreads 12
[2025-05-31 03:28:34] Threads: 12
[2025-05-31 03:28:34] Checking for CVMFS
[2025-05-31 03:28:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-31 03:28:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-31 03:28:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-31 03:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-31 03:28:39] 2.12.7.0 110200 9824 43984 146622 0 56 2518504 4096001 1273 130560 0 14971594 99.994 2413496 1113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-31 03:28:39] CVMFS is ok
[2025-05-31 03:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-31 03:28:39] Checking for apptainer binary...
[2025-05-31 03:28:39] apptainer is not installed, using version from CVMFS
[2025-05-31 03:28:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-31 03:28:58] ryzen4700s
[2025-05-31 03:28:58] apptainer works
[2025-05-31 03:28:59] Set ATHENA_PROC_NUMBER=12
[2025-05-31 03:28:59] Set ATHENA_CORE_NUMBER=12
[2025-05-31 03:28:59] Starting ATLAS job with PandaID=6671140259
[2025-05-31 03:28:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-31 05:08:42]  *** The last 200 lines of the pilot log: ***
[2025-05-31 05:08:42]  is_altstaged=None
[2025-05-31 05:08:42]  is_tar=False
[2025-05-31 05:08:42]  lfn=log.44871837._100059.job.log.tgz.1
[2025-05-31 05:08:42]  mtime=0
[2025-05-31 05:08:42]  protocol_id=None
[2025-05-31 05:08:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-31 05:08:42]  replicas=None
[2025-05-31 05:08:42]  scope=mc23_13p6TeV
[2025-05-31 05:08:42]  status=None
[2025-05-31 05:08:42]  status_code=0
[2025-05-31 05:08:42]  storage_token=
[2025-05-31 05:08:42]  surl=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6671140259/log.44871837._100059.job.log.tgz.1
[2025-05-31 05:08:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/db/log.44871837._100059.job.log.tgz.1
[2025-05-31 05:08:42]  workdir=None
[2025-05-31 05:08:42] ]
[2025-05-31 05:08:42] 2025-05-31 05:08:14,984 | INFO     | transferring file log.44871837._100059.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6671140259/log.44871837._100059.job.log.tgz.1 t
[2025-05-31 05:08:42] 2025-05-31 05:08:14,985 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6671140259/log.44871837._100059.job.log.tgz.1 /opt/boinc/instance_home
[2025-05-31 05:08:42] 2025-05-31 05:08:15,007 | INFO     | adding to output.list: log.44871837._100059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/db/log.44871837._100059.job.log.tg
[2025-05-31 05:08:42] 2025-05-31 05:08:15,008 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-31 05:08:42] 2025-05-31 05:08:15,008 | INFO     | summary of transferred files:
[2025-05-31 05:08:42] 2025-05-31 05:08:15,008 | INFO     |  -- lfn=log.44871837._100059.job.log.tgz.1, status_code=0, status=transferred
[2025-05-31 05:08:42] 2025-05-31 05:08:15,008 | INFO     | stage-out finished correctly
[2025-05-31 05:08:42] 2025-05-31 05:08:16,179 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-31 05:08:42] 2025-05-31 05:08:16,254 | INFO     | job 6671140259 has state=finished
[2025-05-31 05:08:42] 2025-05-31 05:08:16,254 | INFO     | preparing for final server update for job 6671140259 in state='finished'
[2025-05-31 05:08:42] 2025-05-31 05:08:16,974 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-31 05:08:42] 2025-05-31 05:08:16,975 | INFO     | this job has now completed (state=finished)
[2025-05-31 05:08:42] 2025-05-31 05:08:16,975 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-31 05:08:42] 2025-05-31 05:08:16,975 | INFO     | log transfer has been attempted: DONE
[2025-05-31 05:08:42] 2025-05-31 05:08:16,975 | INFO     | job 6671140259 has finished - writing final server update
[2025-05-31 05:08:42] 2025-05-31 05:08:16,975 | INFO     | total number of processed events: 400 (read)
[2025-05-31 05:08:42] 2025-05-31 05:08:16,996 | INFO     | executing command: lscpu
[2025-05-31 05:08:42] 2025-05-31 05:08:17,045 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-31 05:08:42] 2025-05-31 05:08:17,946 | WARNING  | process 1414993 can no longer be monitored (due to stat problems) - aborting
[2025-05-31 05:08:42] 2025-05-31 05:08:17,947 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6671140259/memory_monitor_summary.json (trf name=prmon)
[2025-05-31 05:08:42] 2025-05-31 05:08:18,027 | INFO     | number of running child processes to parent process 1414993: 1
[2025-05-31 05:08:42] 2025-05-31 05:08:18,027 | INFO     | maximum number of monitored processes: 6
[2025-05-31 05:08:42] 2025-05-31 05:08:20,530 | INFO     | monitor loop #436: job 0:6671140259 is in state 'finished'
[2025-05-31 05:08:42] 2025-05-31 05:08:20,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-31 05:08:42] 2025-05-31 05:08:22,830 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-31 05:08:42] 2025-05-31 05:08:22,830 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6671140259/memory_monitor_summary.json (trf name=prmon)
[2025-05-31 05:08:42] 2025-05-31 05:08:22,831 | INFO     | extracted standard info from prmon json
[2025-05-31 05:08:42] 2025-05-31 05:08:22,831 | INFO     | extracted standard memory fields from prmon json
[2025-05-31 05:08:42] 2025-05-31 05:08:22,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-31 05:08:42] 2025-05-31 05:08:22,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-31 05:08:42] 2025-05-31 05:08:22,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-31 05:08:42] 2025-05-31 05:08:22,833 | INFO     | fitting pss+swap vs Time
[2025-05-31 05:08:42] 2025-05-31 05:08:22,834 | INFO     | sum of square deviations: 226022842.5
[2025-05-31 05:08:42] 2025-05-31 05:08:22,834 | INFO     | sum of deviations: -10833355664.5
[2025-05-31 05:08:42] 2025-05-31 05:08:22,834 | INFO     | mean x: 1748665244.5
[2025-05-31 05:08:42] 2025-05-31 05:08:22,834 | INFO     | mean y: 2780663.1222222224
[2025-05-31 05:08:42] 2025-05-31 05:08:22,834 | INFO     | -- intersect: 83816931136.95477
[2025-05-31 05:08:42] 2025-05-31 05:08:22,834 | INFO     | intersect: 83816931136.95477
[2025-05-31 05:08:42] 2025-05-31 05:08:22,835 | INFO     | chi2: 0.03871827469218635
[2025-05-31 05:08:42] 2025-05-31 05:08:22,835 | INFO     | -- intersect: 83816931136.95477
[2025-05-31 05:08:42] 2025-05-31 05:08:22,835 | INFO     | current memory leak: -47.93 B/s (using 90 data points, chi2=0.04)
[2025-05-31 05:08:42] 2025-05-31 05:08:22,835 | INFO     | ..............................
[2025-05-31 05:08:42] 2025-05-31 05:08:22,835 | INFO     | . Timing measurements:
[2025-05-31 05:08:42] 2025-05-31 05:08:22,835 | INFO     | . get job = 0 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | . initial setup = 2 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | . payload setup = 19 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | . stage-in = 0 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | . payload execution = 5871 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | . stage-out = 0 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | . log creation = 0 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,836 | INFO     | ..............................
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | 
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | job summary report
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | --------------------------------------------------
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | PanDA job id: 6671140259
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | task id: 44871837
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | errors: (none)
[2025-05-31 05:08:42] 2025-05-31 05:08:22,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | pilot state: finished 
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | transexitcode: 0
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | exeerrorcode: 0
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | exeerrordiag: 
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | exitcode: 0
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | exitmsg: OK
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | cpuconsumptiontime: 45077 s
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | nevents: 400
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | neventsw: 0
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | pid: 1414993
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | pgrp: 1414993
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | corecount: 12
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | event service: False
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | sizes: {0: 2405207, 4: 2405413, 11: 2405441, 5894: 2431980, 5895: 2440967, 5896: 2441023, 5903: 2441321}
[2025-05-31 05:08:42] 2025-05-31 05:08:22,952 | INFO     | --------------------------------------------------
[2025-05-31 05:08:42] 2025-05-31 05:08:22,953 | INFO     | 
[2025-05-31 05:08:42] 2025-05-31 05:08:22,953 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-05-31 05:08:42] 2025-05-31 05:08:22,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | job 6671140259 has completed (purged errors)
[2025-05-31 05:08:42] 2025-05-31 05:08:22,975 | INFO     | overall cleanup function is called
[2025-05-31 05:08:42] 2025-05-31 05:08:23,983 | INFO     | --- collectZombieJob: --- 10, [1414993]
[2025-05-31 05:08:42] 2025-05-31 05:08:23,983 | INFO     | zombie collector waiting for pid 1414993
[2025-05-31 05:08:42] 2025-05-31 05:08:23,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-31 05:08:42] 2025-05-31 05:08:23,983 | INFO     | collected zombie processes
[2025-05-31 05:08:42] 2025-05-31 05:08:23,983 | INFO     | will attempt to kill all subprocesses of pid=1414993
[2025-05-31 05:08:42] 2025-05-31 05:08:24,064 | INFO     | process IDs to be killed: [1414993] (in reverse order)
[2025-05-31 05:08:42] 2025-05-31 05:08:24,107 | WARNING  | found no corresponding commands to process id(s)
[2025-05-31 05:08:42] 2025-05-31 05:08:24,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-31 05:08:42] 2025-05-31 05:08:24,110 | INFO     | did not find any defunct processes belonging to 1414993
[2025-05-31 05:08:42] 2025-05-31 05:08:24,112 | INFO     | did not find any defunct processes belonging to 1414993
[2025-05-31 05:08:42] 2025-05-31 05:08:24,113 | INFO     | ready for new job
[2025-05-31 05:08:42] 2025-05-31 05:08:24,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-31 05:08:42] 2025-05-31 05:08:24,114 | INFO     | **************************************
[2025-05-31 05:08:42] 2025-05-31 05:08:24,114 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-31 05:08:42] 2025-05-31 05:08:24,115 | INFO     | **************************************
[2025-05-31 05:08:42] 2025-05-31 05:08:24,115 | INFO     | 
[2025-05-31 05:08:42] 2025-05-31 05:08:24,136 | INFO     | architecture information:
[2025-05-31 05:08:42] 2025-05-31 05:08:24,136 | INFO     | executing command: cat /etc/os-release
[2025-05-31 05:08:42] 2025-05-31 05:08:24,154 | INFO     | cat /etc/os-release:
[2025-05-31 05:08:42] NAME="CentOS Linux"
[2025-05-31 05:08:42] VERSION="7 (Core)"
[2025-05-31 05:08:42] ID="centos"
[2025-05-31 05:08:42] ID_LIKE="rhel fedora"
[2025-05-31 05:08:42] VERSION_ID="7"
[2025-05-31 05:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-31 05:08:42] ANSI_COLOR="0;31"
[2025-05-31 05:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-31 05:08:42] HOME_URL="https://www.centos.org/"
[2025-05-31 05:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-31 05:08:42] 
[2025-05-31 05:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-31 05:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-31 05:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-31 05:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-31 05:08:42] 
[2025-05-31 05:08:42] 2025-05-31 05:08:24,154 | INFO     | **************************************
[2025-05-31 05:08:42] 2025-05-31 05:08:24,655 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-05-31 05:08:42] 2025-05-31 05:08:24,675 | INFO     | sufficient remaining disk space (122220969984 B)
[2025-05-31 05:08:42] 2025-05-31 05:08:24,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | INFO     | current server update state: UPDATING_FINAL
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | INFO     | update_server=False
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | INFO     | aborting loop
[2025-05-31 05:08:42] 2025-05-31 05:08:24,676 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-31 05:08:42] 2025-05-31 05:08:24,677 | INFO     | found 0 job(s) in 20 queues
[2025-05-31 05:08:42] 2025-05-31 05:08:24,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-31 05:08:42] 2025-05-31 05:08:24,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-31 05:08:42] 2025-05-31 05:08:25,223 | INFO     | all payload control threads have been joined
[2025-05-31 05:08:42] 2025-05-31 05:08:25,401 | INFO     | all job control threads have been joined
[2025-05-31 05:08:42] 2025-05-31 05:08:25,540 | INFO     | all data control threads have been joined
[2025-05-31 05:08:42] 2025-05-31 05:08:25,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-31 05:08:42] 2025-05-31 05:08:25,679 | INFO     | [job] retrieve thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:25,679 | INFO     | [job] queue monitor thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:25,680 | INFO     | [job] job monitor thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:25,723 | INFO     | [payload] failed_post thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:25,787 | INFO     | [payload] execute_payloads thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:25,843 | INFO     | [payload] validate_pre thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,227 | INFO     | [payload] control thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,403 | INFO     | [job] control thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,543 | INFO     | [data] control thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,567 | INFO     | [job] validate thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,591 | INFO     | [payload] validate_post thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-31 05:08:42] 2025-05-31 05:08:26,996 | INFO     | [data] copytool_in thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:26,999 | INFO     | [job] create_data_payload thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:27,603 | INFO     | [data] copytool_out thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:30,771 | INFO     | [data] queue_monitor thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:35,479 | INFO     | job.realtimelogging is not enabled
[2025-05-31 05:08:42] 2025-05-31 05:08:36,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-31 05:08:42] 2025-05-31 05:08:37,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645718521664)>', '<ExcThread(monitor, started 139645283198720)>']
[2025-05-31 05:08:42] 2025-05-31 05:08:37,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-31 05:08:42] 2025-05-31 05:08:37,727 | INFO     | [monitor] control thread has ended
[2025-05-31 05:08:42] 2025-05-31 05:08:42,291 | INFO     | all workflow threads have been joined
[2025-05-31 05:08:42] 2025-05-31 05:08:42,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-31 05:08:42] 2025-05-31 05:08:42,291 | INFO     | traces error code: 0
[2025-05-31 05:08:42] 2025-05-31 05:08:42,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-31 05:08:42] 2025-05-31 05:08:42,419 [wrapper] ==== pilot stdout END ====
[2025-05-31 05:08:42] 2025-05-31 05:08:42,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-31 05:08:42] 2025-05-31 05:08:42,424 [wrapper] pilotpid: 1398689
[2025-05-31 05:08:42] 2025-05-31 05:08:42,426 [wrapper] Pilot exit status: 0
[2025-05-31 05:08:42] 2025-05-31 05:08:42,436 [wrapper] pandaids: 6671140259
[2025-05-31 05:08:42] 2025-05-31 05:08:42,459 [wrapper] cleanup supervisor_pilot 1444625 1398690
[2025-05-31 05:08:42] 2025-05-31 05:08:42,462 [wrapper] Test setup, not cleaning
[2025-05-31 05:08:42] 2025-05-31 05:08:42,466 [wrapper] apfmon messages muted
[2025-05-31 05:08:42] 2025-05-31 05:08:42,469 [wrapper] ==== wrapper stdout END ====
[2025-05-31 05:08:42] 2025-05-31 05:08:42,473 [wrapper] ==== wrapper stderr END ====
[2025-05-31 05:08:42]  *** Error codes and diagnostics ***
[2025-05-31 05:08:42]     "exeErrorCode": 0,
[2025-05-31 05:08:42]     "exeErrorDiag": "",
[2025-05-31 05:08:42]     "pilotErrorCode": 0,
[2025-05-31 05:08:42]     "pilotErrorDiag": "",
[2025-05-31 05:08:42]  *** Listing of results directory ***
[2025-05-31 05:08:42] total 410148
[2025-05-31 05:08:42] -rw-r--r-- 1 boinc boinc    495897 May 29 12:12 pilot3.tar.gz
[2025-05-31 05:08:42] -rwx------ 1 boinc boinc     37140 May 29 12:23 runpilot2-wrapper.sh
[2025-05-31 05:08:42] -rw-r--r-- 1 boinc boinc      5111 May 29 12:23 queuedata.json
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc       100 May 31 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-31 05:08:42] -rwxr-xr-x 1 boinc boinc      7986 May 31 03:28 run_atlas
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc       105 May 31 03:28 job.xml
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc      9446 May 31 03:28 init_data.xml
[2025-05-31 05:08:42] -rw-r--r-- 2 boinc boinc 224728458 May 31 03:28 EVNT.44871834._002967.pool.root.1
[2025-05-31 05:08:42] drwxrwx--x 2 boinc boinc      4096 May 31 03:28 shared
[2025-05-31 05:08:42] -rw-r--r-- 2 boinc boinc    508884 May 31 03:28 input.tar.gz
[2025-05-31 05:08:42] -rw-r--r-- 2 boinc boinc     15093 May 31 03:28 start_atlas.sh
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc         0 May 31 03:28 boinc_lockfile
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc      2559 May 31 03:28 pandaJob.out
[2025-05-31 05:08:42] -rw------- 1 boinc boinc    987388 May 31 03:29 agis_schedconf.cvmfs.json
[2025-05-31 05:08:42] -rw------- 1 boinc boinc   1603667 May 31 03:29 agis_ddmendpoints.agis.ALL.json
[2025-05-31 05:08:42] drwx------ 4 boinc boinc      4096 May 31 03:29 pilot3
[2025-05-31 05:08:42] -rw------- 1 boinc boinc 189501834 May 31 05:07 HITS.44871837._100059.pool.root.1
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc       529 May 31 05:07 boinc_task_state.xml
[2025-05-31 05:08:42] -rw------- 1 boinc boinc      1017 May 31 05:08 memory_monitor_summary.json
[2025-05-31 05:08:42] -rw------- 1 boinc boinc    372862 May 31 05:08 log.44871837._100059.job.log.tgz.1
[2025-05-31 05:08:42] -rw------- 1 boinc boinc        95 May 31 05:08 pilot_heartbeat.json
[2025-05-31 05:08:42] -rw------- 1 boinc boinc      7667 May 31 05:08 heartbeat.json
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc      8192 May 31 05:08 boinc_mmap_file
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc        27 May 31 05:08 wrapper_checkpoint.txt
[2025-05-31 05:08:42] -rw------- 1 boinc boinc      4572 May 31 05:08 pilotlog.txt
[2025-05-31 05:08:42] -rw------- 1 boinc boinc    584227 May 31 05:08 log.44871837._100059.job.log.1
[2025-05-31 05:08:42] -rw------- 1 boinc boinc       357 May 31 05:08 output.list
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc       620 May 31 05:08 runtime_log
[2025-05-31 05:08:42] -rw------- 1 boinc boinc    972800 May 31 05:08 result.tar.gz
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc      8973 May 31 05:08 runtime_log.err
[2025-05-31 05:08:42] -rw------- 1 boinc boinc       653 May 31 05:08 Kw0LDm7Sre7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYXeKDm1e4Sym.diag
[2025-05-31 05:08:42] -rw-rw-r-- 1 boinc boinc     21255 May 31 05:08 stderr.txt
[2025-05-31 05:08:42] HITS file was successfully produced:
[2025-05-31 05:08:42] -rw------- 1 boinc boinc 189501834 May 31 05:07 shared/HITS.pool.root.1
[2025-05-31 05:08:42]  *** Contents of shared directory: ***
[2025-05-31 05:08:42] total 406004
[2025-05-31 05:08:42] -rw-r--r-- 2 boinc boinc 224728458 May 31 03:28 ATLAS.root_0
[2025-05-31 05:08:42] -rw-r--r-- 2 boinc boinc    508884 May 31 03:28 input.tar.gz
[2025-05-31 05:08:42] -rw-r--r-- 2 boinc boinc     15093 May 31 03:28 start_atlas.sh
[2025-05-31 05:08:42] -rw------- 1 boinc boinc 189501834 May 31 05:07 HITS.pool.root.1
[2025-05-31 05:08:42] -rw------- 1 boinc boinc    972800 May 31 05:08 result.tar.gz
05:08:44 (1394750): run_atlas exited; CPU time 45084.064404
05:08:44 (1394750): called boinc_finish(0)

</stderr_txt>
]]>

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