Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:37:58 (27466): wrapper (7.7.26015): starting
07:37:58 (27466): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 07:37:58] Arguments: --nthreads 8
[2025-05-30 07:37:58] Threads: 8
[2025-05-30 07:37:58] Checking for CVMFS
[2025-05-30 07:37:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 07:37:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 07:38:00] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 07:38:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 07:38:03] 2.11.2.0 29781 25586 92468 146588 2 16 23762751 25165824 4635 130560 0 14553820 99.832 14436761 1839 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 07:38:03] CVMFS is ok
[2025-05-30 07:38:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 07:38:03] Checking for apptainer binary...
[2025-05-30 07:38:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 07:38:03] Running /usr/bin/apptainer --version
[2025-05-30 07:38:03] apptainer version 1.3.2-1.el7
[2025-05-30 07:38:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 08:08:34] cg-vwn415.simple-grid.lan
[2025-05-30 08:08:34] apptainer works
[2025-05-30 08:08:34] Set ATHENA_PROC_NUMBER=8
[2025-05-30 08:08:34] Set ATHENA_CORE_NUMBER=8
[2025-05-30 08:08:34] Starting ATLAS job with PandaID=6669443631
[2025-05-30 08:08:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 14:50:15]  *** The last 200 lines of the pilot log: ***
[2025-05-30 14:50:15] 2025-05-30 11:37:59,342 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 14:50:15] 2025-05-30 11:37:59,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 14:50:15] 2025-05-30 11:37:59,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 14:50:15] 2025-05-30 11:37:59,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 14:50:15] 2025-05-30 11:37:59,349 | INFO     | fitting pss+swap vs Time
[2025-05-30 14:50:15] 2025-05-30 11:37:59,350 | INFO     | sum of square deviations: 9417545878.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,353 | INFO     | sum of deviations: 56740643432.49996
[2025-05-30 14:50:15] 2025-05-30 11:37:59,353 | INFO     | mean x: 1748595490.5
[2025-05-30 14:50:15] 2025-05-30 11:37:59,353 | INFO     | mean y: 2483369.4006410255
[2025-05-30 14:50:15] 2025-05-30 11:37:59,353 | INFO     | -- intersect: -10532791374.087887
[2025-05-30 14:50:15] 2025-05-30 11:37:59,353 | INFO     | intersect: -10532791374.087887
[2025-05-30 14:50:15] 2025-05-30 11:37:59,354 | INFO     | chi2: 7.0442660432720245
[2025-05-30 14:50:15] 2025-05-30 11:37:59,355 | INFO     | sum of square deviations: 8971993338.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,358 | INFO     | sum of deviations: 77386629714.00003
[2025-05-30 14:50:15] 2025-05-30 11:37:59,358 | INFO     | mean x: 1748595338.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,358 | INFO     | mean y: 2490340.1140065147
[2025-05-30 14:50:15] 2025-05-30 11:37:59,358 | INFO     | -- intersect: -15079765613.900917
[2025-05-30 14:50:15] 2025-05-30 11:37:59,358 | INFO     | intersect: -15079765613.900917
[2025-05-30 14:50:15] 2025-05-30 11:37:59,359 | INFO     | chi2: 6.253046864180419
[2025-05-30 14:50:15] 2025-05-30 11:37:59,359 | INFO     | current chi2=6.253046864180419 (change=11.232102453701312 %)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,359 | INFO     | right removable region: 306
[2025-05-30 14:50:15] 2025-05-30 11:37:59,359 | INFO     | sum of square deviations: 8971993338.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,362 | INFO     | sum of deviations: -50684884505.999954
[2025-05-30 14:50:15] 2025-05-30 11:37:59,363 | INFO     | mean x: 1748595643.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,363 | INFO     | mean y: 2520113.7328990228
[2025-05-30 14:50:15] 2025-05-30 11:37:59,363 | INFO     | -- intersect: 9880745038.151554
[2025-05-30 14:50:15] 2025-05-30 11:37:59,363 | INFO     | intersect: 9880745038.151554
[2025-05-30 14:50:15] 2025-05-30 11:37:59,364 | INFO     | chi2: 2.4962780416493517
[2025-05-30 14:50:15] 2025-05-30 11:37:59,364 | INFO     | current chi2=2.4962780416493517 (change=64.56297893471037 %)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,364 | INFO     | sum of square deviations: 8540720135.5
[2025-05-30 14:50:15] 2025-05-30 11:37:59,367 | INFO     | sum of deviations: -103234320906.50002
[2025-05-30 14:50:15] 2025-05-30 11:37:59,368 | INFO     | mean x: 1748595795.5
[2025-05-30 14:50:15] 2025-05-30 11:37:59,368 | INFO     | mean y: 2538606.1887417217
[2025-05-30 14:50:15] 2025-05-30 11:37:59,368 | INFO     | -- intersect: 21138355800.1139
[2025-05-30 14:50:15] 2025-05-30 11:37:59,368 | INFO     | intersect: 21138355800.1139
[2025-05-30 14:50:15] 2025-05-30 11:37:59,368 | INFO     | chi2: 1.1354649266998662
[2025-05-30 14:50:15] 2025-05-30 11:37:59,368 | INFO     | current chi2=1.1354649266998662 (change=54.51368366203162 %)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,369 | INFO     | sum of square deviations: 8123493708.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,372 | INFO     | sum of deviations: -106193974325.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,372 | INFO     | mean x: 1748595948.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,372 | INFO     | mean y: 2539675.9292929294
[2025-05-30 14:50:15] 2025-05-30 11:37:59,373 | INFO     | -- intersect: 22860974714.026703
[2025-05-30 14:50:15] 2025-05-30 11:37:59,373 | INFO     | intersect: 22860974714.026703
[2025-05-30 14:50:15] 2025-05-30 11:37:59,373 | INFO     | chi2: 1.1080573248482561
[2025-05-30 14:50:15] 2025-05-30 11:37:59,373 | INFO     | current chi2=1.1080573248482561 (change=2.4137779342306915 %)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,373 | INFO     | left removable region: 30
[2025-05-30 14:50:15] 2025-05-30 11:37:59,374 | INFO     | sum of square deviations: 6519285025.0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,376 | INFO     | sum of deviations: -58598275273.5
[2025-05-30 14:50:15] 2025-05-30 11:37:59,377 | INFO     | mean x: 1748596222.5
[2025-05-30 14:50:15] 2025-05-30 11:37:59,377 | INFO     | mean y: 2537798.2137681157
[2025-05-30 14:50:15] 2025-05-30 11:37:59,377 | INFO     | -- intersect: 15719709603.91454
[2025-05-30 14:50:15] 2025-05-30 11:37:59,377 | INFO     | intersect: 15719709603.91454
[2025-05-30 14:50:15] 2025-05-30 11:37:59,377 | INFO     | chi2: 0.22160911578102532
[2025-05-30 14:50:15] 2025-05-30 11:37:59,378 | INFO     | -- intersect: 15719709603.91454
[2025-05-30 14:50:15] 2025-05-30 11:37:59,378 | INFO     | current memory leak: -8.99 B/s (using 276 data points, chi2=0.22)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | ..............................
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . Timing measurements:
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . get job = 0 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . initial setup = 3 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . payload setup = 177 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . stage-in = 0 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . payload execution = 19135 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . stage-out = 3 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,379 | INFO     | . log creation = 1 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,380 | INFO     | ..............................
[2025-05-30 14:50:15] 2025-05-30 11:37:59,502 | INFO     | 
[2025-05-30 14:50:15] 2025-05-30 11:37:59,502 | INFO     | job summary report
[2025-05-30 14:50:15] 2025-05-30 11:37:59,502 | INFO     | --------------------------------------------------
[2025-05-30 14:50:15] 2025-05-30 11:37:59,502 | INFO     | PanDA job id: 6669443631
[2025-05-30 14:50:15] 2025-05-30 11:37:59,502 | INFO     | task id: 44871837
[2025-05-30 14:50:15] 2025-05-30 11:37:59,502 | INFO     | errors: (none)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | pilot state: finished 
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | transexitcode: 0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | exeerrorcode: 0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | exeerrordiag: 
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | exitcode: 0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | exitmsg: OK
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | cpuconsumptiontime: 70992 s
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | nevents: 400
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | neventsw: 0
[2025-05-30 14:50:15] 2025-05-30 11:37:59,503 | INFO     | pid: 32228
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | pgrp: 32228
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | corecount: 8
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | event service: False
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | sizes: {0: 2404406, 1: 2405091, 2: 2405290, 13: 2405290, 23: 2405346, 34: 2405374, 45: 2405530, 56: 2405558, 66: 2405586, 77: 2405614, 88: 2405670, 90: 2406184, 99
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | --------------------------------------------------
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | 
[2025-05-30 14:50:15] 2025-05-30 11:37:59,504 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-30 14:50:15] 2025-05-30 11:37:59,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,978 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | job 6669443631 has completed (purged errors)
[2025-05-30 14:50:15] 2025-05-30 11:37:59,979 | INFO     | overall cleanup function is called
[2025-05-30 14:50:15] 2025-05-30 11:38:00,991 | INFO     | --- collectZombieJob: --- 10, [32228]
[2025-05-30 14:50:15] 2025-05-30 11:38:00,992 | INFO     | zombie collector waiting for pid 32228
[2025-05-30 14:50:15] 2025-05-30 11:38:00,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 14:50:15] 2025-05-30 11:38:00,992 | INFO     | collected zombie processes
[2025-05-30 14:50:15] 2025-05-30 11:38:00,992 | INFO     | will attempt to kill all subprocesses of pid=32228
[2025-05-30 14:50:15] 2025-05-30 11:38:01,107 | INFO     | process IDs to be killed: [32228] (in reverse order)
[2025-05-30 14:50:15] 2025-05-30 11:38:01,650 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 14:50:15] 2025-05-30 11:38:01,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 14:50:15] 2025-05-30 11:38:01,654 | INFO     | did not find any defunct processes belonging to 32228
[2025-05-30 14:50:15] 2025-05-30 11:38:01,657 | INFO     | did not find any defunct processes belonging to 32228
[2025-05-30 14:50:15] 2025-05-30 11:38:01,658 | INFO     | ready for new job
[2025-05-30 14:50:15] 2025-05-30 11:38:01,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 14:50:15] 2025-05-30 11:38:01,660 | INFO     | **************************************
[2025-05-30 14:50:15] 2025-05-30 11:38:01,660 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 14:50:15] 2025-05-30 11:38:01,660 | INFO     | **************************************
[2025-05-30 14:50:15] 2025-05-30 11:38:01,660 | INFO     | 
[2025-05-30 14:50:15] 2025-05-30 11:38:01,661 | INFO     | pilot is running in a VM
[2025-05-30 14:50:15] 2025-05-30 11:38:01,661 | INFO     | architecture information:
[2025-05-30 14:50:15] 2025-05-30 11:38:01,668 | INFO     | executing command: cat /etc/os-release
[2025-05-30 14:50:15] 2025-05-30 11:38:01,866 | INFO     | cat /etc/os-release:
[2025-05-30 14:50:15] NAME="CentOS Linux"
[2025-05-30 14:50:15] VERSION="7 (Core)"
[2025-05-30 14:50:15] ID="centos"
[2025-05-30 14:50:15] ID_LIKE="rhel fedora"
[2025-05-30 14:50:15] VERSION_ID="7"
[2025-05-30 14:50:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 14:50:15] ANSI_COLOR="0;31"
[2025-05-30 14:50:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 14:50:15] HOME_URL="https://www.centos.org/"
[2025-05-30 14:50:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 14:50:15] 
[2025-05-30 14:50:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 14:50:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 14:50:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 14:50:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 14:50:15] 
[2025-05-30 14:50:15] 2025-05-30 11:38:01,866 | INFO     | **************************************
[2025-05-30 14:50:15] 2025-05-30 11:38:02,369 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-30 14:50:15] 2025-05-30 11:38:02,584 | INFO     | sufficient remaining disk space (496185114624 B)
[2025-05-30 14:50:15] 2025-05-30 11:38:02,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 14:50:15] 2025-05-30 11:38:02,585 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 14:50:15] 2025-05-30 11:38:02,585 | INFO     | update_server=False
[2025-05-30 14:50:15] 2025-05-30 11:38:02,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 14:50:15] 2025-05-30 11:38:02,585 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 14:50:15] 2025-05-30 11:38:02,585 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 14:50:15] 2025-05-30 11:38:02,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 14:50:15] 2025-05-30 11:38:02,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 14:50:15] 2025-05-30 11:38:02,875 | INFO     | all payload control threads have been joined
[2025-05-30 14:50:15] 2025-05-30 11:38:03,042 | INFO     | all data control threads have been joined
[2025-05-30 14:50:15] 2025-05-30 11:38:03,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 14:50:15] 2025-05-30 11:38:03,306 | INFO     | aborting loop
[2025-05-30 14:50:15] 2025-05-30 11:38:03,591 | INFO     | [job] retrieve thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:03,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 14:50:15] 2025-05-30 11:38:03,882 | INFO     | [payload] control thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,049 | INFO     | [data] control thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,066 | INFO     | all job control threads have been joined
[2025-05-30 14:50:15] 2025-05-30 11:38:04,190 | INFO     | [data] copytool_in thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,312 | INFO     | [job] job monitor thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,440 | INFO     | [payload] validate_post thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,481 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 14:50:15] 2025-05-30 11:38:04,640 | INFO     | [job] validate thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:04,884 | INFO     | [payload] failed_post thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:05,047 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:05,047 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:05,073 | INFO     | [job] control thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:05,525 | INFO     | [job] queue monitor thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:05,628 | INFO     | [data] copytool_out thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:06,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 14:50:15] 2025-05-30 11:38:10,031 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:12,639 | INFO     | job.realtimelogging is not enabled
[2025-05-30 14:50:15] 2025-05-30 11:38:13,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 14:50:15] 2025-05-30 11:38:14,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787006605120)>', '<ExcThread(monitor, started 139786312460032)>']
[2025-05-30 14:50:15] 2025-05-30 11:38:14,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 14:50:15] 2025-05-30 11:38:14,656 | INFO     | [monitor] control thread has ended
[2025-05-30 14:50:15] 2025-05-30 11:38:19,553 | INFO     | all workflow threads have been joined
[2025-05-30 14:50:15] 2025-05-30 11:38:19,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 14:50:15] 2025-05-30 11:38:19,554 | INFO     | traces error code: 0
[2025-05-30 14:50:15] 2025-05-30 11:38:19,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 14:50:15] 2025-05-30 11:38:19,972 [wrapper] ==== pilot stdout END ====
[2025-05-30 14:50:15] 2025-05-30 11:38:20,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 14:50:15] 2025-05-30 11:38:20,156 [wrapper] pilotpid: 19322
[2025-05-30 14:50:15] 2025-05-30 11:38:20,196 [wrapper] Pilot exit status: 0
[2025-05-30 14:50:15] 2025-05-30 11:38:20,633 [wrapper] pandaids: 6669443631
[2025-05-30 14:50:15] 2025-05-30 11:38:21,149 [wrapper] cleanup supervisor_pilot  1522 19323
[2025-05-30 14:50:15] 2025-05-30 11:38:21,215 [wrapper] Test setup, not cleaning
[2025-05-30 14:50:15] 2025-05-30 11:38:21,380 [wrapper] apfmon messages muted
[2025-05-30 14:50:15] 2025-05-30 11:38:21,490 [wrapper] ==== wrapper stdout END ====
[2025-05-30 14:50:15] 2025-05-30 11:38:21,614 [wrapper] ==== wrapper stderr END ====
[2025-05-30 14:50:15]  *** Error codes and diagnostics ***
[2025-05-30 14:50:15]     "exeErrorCode": 0,
[2025-05-30 14:50:15]     "exeErrorDiag": "",
[2025-05-30 14:50:15]     "pilotErrorCode": 0,
[2025-05-30 14:50:15]     "pilotErrorDiag": "",
[2025-05-30 14:50:15]  *** Listing of results directory ***
[2025-05-30 14:50:15] total 415936
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc      5111 May 29 09:00 queuedata.json
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc    495897 May 29 09:00 pilot3.tar.gz
[2025-05-30 14:50:15] -rwx------. 1 boinc boinc     37140 May 29 09:01 runpilot2-wrapper.sh
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc       100 May 30 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 14:50:15] -rwxr-xr-x. 1 boinc boinc      7986 May 30 07:37 run_atlas
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc       105 May 30 07:37 job.xml
[2025-05-30 14:50:15] -rw-r--r--. 2 boinc boinc 225154618 May 30 07:37 EVNT.44871834._003803.pool.root.1
[2025-05-30 14:50:15] -rw-r--r--. 2 boinc boinc     15093 May 30 07:37 start_atlas.sh
[2025-05-30 14:50:15] drwxrwx--x. 2 boinc boinc        68 May 30 07:37 shared
[2025-05-30 14:50:15] -rw-r--r--. 2 boinc boinc    508878 May 30 07:37 input.tar.gz
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc      6372 May 30 07:37 init_data.xml
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc         0 May 30 07:37 boinc_lockfile
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc      2559 May 30 08:08 pandaJob.out
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc    992366 May 30 08:11 agis_schedconf.cvmfs.json
[2025-05-30 14:50:15] drwx------. 4 boinc boinc      4096 May 30 08:11 pilot3
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc 192710529 May 30 13:35 HITS.44871837._096509.pool.root.1
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc       531 May 30 13:35 boinc_task_state.xml
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc      1019 May 30 13:36 memory_monitor_summary.json
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc   1603667 May 30 13:36 agis_ddmendpoints.agis.ALL.json
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc    447292 May 30 13:36 log.44871837._096509.job.log.tgz.1
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc        95 May 30 13:37 pilot_heartbeat.json
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc      7697 May 30 13:37 heartbeat.json
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc      4611 May 30 13:38 pilotlog.txt
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc   1658971 May 30 13:38 log.44871837._096509.job.log.1
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc       357 May 30 13:38 output.list
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc       620 May 30 13:38 runtime_log
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc   2129920 May 30 13:38 result.tar.gz
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc      8659 May 30 13:38 runtime_log.err
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc       657 May 30 13:38 aNMMDmtRme7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUmUKDmplbeen.diag
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc      8192 May 30 14:50 boinc_mmap_file
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc        28 May 30 14:50 wrapper_checkpoint.txt
[2025-05-30 14:50:15] -rw-r--r--. 1 boinc boinc     20512 May 30 14:50 stderr.txt
[2025-05-30 14:50:15] HITS file was successfully produced:
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc 192710529 May 30 13:35 shared/HITS.pool.root.1
[2025-05-30 14:50:15]  *** Contents of shared directory: ***
[2025-05-30 14:50:15] total 410672
[2025-05-30 14:50:15] -rw-r--r--. 2 boinc boinc 225154618 May 30 07:37 ATLAS.root_0
[2025-05-30 14:50:15] -rw-r--r--. 2 boinc boinc     15093 May 30 07:37 start_atlas.sh
[2025-05-30 14:50:15] -rw-r--r--. 2 boinc boinc    508878 May 30 07:37 input.tar.gz
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc 192710529 May 30 13:35 HITS.pool.root.1
[2025-05-30 14:50:15] -rw-------. 1 boinc boinc   2129920 May 30 13:38 result.tar.gz
14:50:17 (27466): run_atlas exited; CPU time 71255.219617
14:50:17 (27466): called boinc_finish(0)

</stderr_txt>
]]>

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