Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:38 (3939399): wrapper (7.7.26015): starting
20:03:38 (3939399): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 20:03:38] Arguments: --nthreads 4
[2025-06-05 20:03:38] Threads: 4
[2025-06-05 20:03:38] Checking for CVMFS
[2025-06-05 20:03:38] No cvmfs_config command found, will try listing directly
[2025-06-05 20:03:38] CVMFS is ok
[2025-06-05 20:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 20:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 20:03:38] Further information can be found at the LHC@home message board.
[2025-06-05 20:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:03:38] Checking for apptainer binary...
[2025-06-05 20:03:38] which: no apptainer in ((null))
[2025-06-05 20:03:38] apptainer is not installed, using version from CVMFS
[2025-06-05 20:03:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:03:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-06-05 20:03:38] apptainer works
[2025-06-05 20:03:38] Set ATHENA_PROC_NUMBER=4
[2025-06-05 20:03:38] Set ATHENA_CORE_NUMBER=4
[2025-06-05 20:03:38] Starting ATLAS job with PandaID=6669624248
[2025-06-05 20:03:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:46:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:46:51] 2025-06-05 21:44:44,215 | INFO     | total number of processed events: 400 (read)
[2025-06-05 23:46:51] 2025-06-05 21:44:44,219 | INFO     | executing command: lscpu
[2025-06-05 23:46:51] 2025-06-05 21:44:44,282 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 23:46:51] 2025-06-05 21:44:45,226 | INFO     | monitor loop #964: job 0:6669624248 is in state 'finished'
[2025-06-05 23:46:51] 2025-06-05 21:44:45,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 23:46:51] 2025-06-05 21:44:47,729 | INFO     | monitor loop #965: job 0:6669624248 is in state 'finished'
[2025-06-05 23:46:51] 2025-06-05 21:44:47,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,257 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 23:46:51] 2025-06-05 21:44:48,258 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6669624248/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,258 | INFO     | extracted standard info from prmon json
[2025-06-05 23:46:51] 2025-06-05 21:44:48,259 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:46:51] 2025-06-05 21:44:48,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:46:51] 2025-06-05 21:44:48,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:46:51] 2025-06-05 21:44:48,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:46:51] 2025-06-05 21:44:48,264 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:46:51] 2025-06-05 21:44:48,265 | INFO     | sum of square deviations: 3168461268.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,266 | INFO     | sum of deviations: 37886704475.99998
[2025-06-05 23:46:51] 2025-06-05 21:44:48,267 | INFO     | mean x: 1749153234.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,267 | INFO     | mean y: 2309438.0368663594
[2025-06-05 23:46:51] 2025-06-05 21:44:48,267 | INFO     | -- intersect: -20913095881.60223
[2025-06-05 23:46:51] 2025-06-05 21:44:48,267 | INFO     | intersect: -20913095881.60223
[2025-06-05 23:46:51] 2025-06-05 21:44:48,267 | INFO     | chi2: 1.480268448083653
[2025-06-05 23:46:51] 2025-06-05 21:44:48,268 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,269 | INFO     | sum of deviations: 36848220956.00002
[2025-06-05 23:46:51] 2025-06-05 21:44:48,269 | INFO     | mean x: 1749153081.5
[2025-06-05 23:46:51] 2025-06-05 21:44:48,269 | INFO     | mean y: 2308697.9150943398
[2025-06-05 23:46:51] 2025-06-05 21:44:48,269 | INFO     | -- intersect: -21813333431.61824
[2025-06-05 23:46:51] 2025-06-05 21:44:48,270 | INFO     | intersect: -21813333431.61824
[2025-06-05 23:46:51] 2025-06-05 21:44:48,270 | INFO     | chi2: 1.4807935006572814
[2025-06-05 23:46:51] 2025-06-05 21:44:48,270 | INFO     | current chi2=1.4807935006572814 (change=-0.03547009154374522 %)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,270 | INFO     | right removable region: 211
[2025-06-05 23:46:51] 2025-06-05 21:44:48,270 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,272 | INFO     | sum of deviations: 8153305292.5
[2025-06-05 23:46:51] 2025-06-05 21:44:48,272 | INFO     | mean x: 1749153386.5
[2025-06-05 23:46:51] 2025-06-05 21:44:48,272 | INFO     | mean y: 2330370.316037736
[2025-06-05 23:46:51] 2025-06-05 21:44:48,272 | INFO     | -- intersect: -4824758070.71183
[2025-06-05 23:46:51] 2025-06-05 21:44:48,272 | INFO     | intersect: -4824758070.71183
[2025-06-05 23:46:51] 2025-06-05 21:44:48,273 | INFO     | chi2: 0.0012645390891555756
[2025-06-05 23:46:51] 2025-06-05 21:44:48,273 | INFO     | current chi2=0.0012645390891555756 (change=99.91457366460843 %)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,273 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,275 | INFO     | sum of deviations: 7063276437.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,275 | INFO     | mean x: 1749153539.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,275 | INFO     | mean y: 2331183.0096618356
[2025-06-05 23:46:51] 2025-06-05 21:44:48,275 | INFO     | -- intersect: -4489824634.083772
[2025-06-05 23:46:51] 2025-06-05 21:44:48,275 | INFO     | intersect: -4489824634.083772
[2025-06-05 23:46:51] 2025-06-05 21:44:48,276 | INFO     | chi2: 0.0009692631457717654
[2025-06-05 23:46:51] 2025-06-05 21:44:48,276 | INFO     | current chi2=0.0009692631457717654 (change=23.35047970569161 %)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,276 | INFO     | left removable region: 20
[2025-06-05 23:46:51] 2025-06-05 21:44:48,276 | INFO     | sum of square deviations: 2160561440.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,277 | INFO     | sum of deviations: 5230149454.999999
[2025-06-05 23:46:51] 2025-06-05 21:44:48,277 | INFO     | mean x: 1749153661.0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,277 | INFO     | mean y: 2332148.7853403143
[2025-06-05 23:46:51] 2025-06-05 21:44:48,278 | INFO     | -- intersect: -4231907571.234102
[2025-06-05 23:46:51] 2025-06-05 21:44:48,278 | INFO     | intersect: -4231907571.234102
[2025-06-05 23:46:51] 2025-06-05 21:44:48,278 | INFO     | chi2: 0.000680741246298868
[2025-06-05 23:46:51] 2025-06-05 21:44:48,278 | INFO     | -- intersect: -4231907571.234102
[2025-06-05 23:46:51] 2025-06-05 21:44:48,278 | INFO     | current memory leak: 2.42 B/s (using 191 data points, chi2=0.00)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | ..............................
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | . Timing measurements:
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | . get job = 0 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | . initial setup = 1 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | . payload setup = 4 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | . stage-in = 0 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,279 | INFO     | . payload execution = 13232 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,280 | INFO     | . stage-out = 1 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,280 | INFO     | . log creation = 0 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,280 | INFO     | ..............................
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | 
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | job summary report
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | --------------------------------------------------
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | PanDA job id: 6669624248
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | task id: 44871837
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | errors: (none)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | pilot state: finished 
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | transexitcode: 0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | exeerrorcode: 0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | exeerrordiag: 
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | exitcode: 0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | exitmsg: OK
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | cpuconsumptiontime: 51546 s
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | nevents: 400
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | neventsw: 0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | pid: 3967834
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | pgrp: 3967834
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | corecount: 4
[2025-06-05 23:46:51] 2025-06-05 21:44:48,388 | INFO     | event service: False
[2025-06-05 23:46:51] 2025-06-05 21:44:48,389 | INFO     | sizes: {0: 2397403, 3: 2397609, 11: 2397637, 13240: 2427551, 13241: 2427550, 13243: 2436569, 13245: 2436753, 13251: 2436923}
[2025-06-05 23:46:51] 2025-06-05 21:44:48,389 | INFO     | --------------------------------------------------
[2025-06-05 23:46:51] 2025-06-05 21:44:48,389 | INFO     | 
[2025-06-05 23:46:51] 2025-06-05 21:44:48,389 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-05 23:46:51] 2025-06-05 21:44:48,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:46:51] 2025-06-05 21:44:48,410 | INFO     | job 6669624248 has completed (purged errors)
[2025-06-05 23:46:51] 2025-06-05 21:44:48,411 | INFO     | overall cleanup function is called
[2025-06-05 23:46:51] 2025-06-05 21:44:49,418 | INFO     | --- collectZombieJob: --- 10, [3967834]
[2025-06-05 23:46:51] 2025-06-05 21:44:49,419 | INFO     | zombie collector waiting for pid 3967834
[2025-06-05 23:46:51] 2025-06-05 21:44:49,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:46:51] 2025-06-05 21:44:49,419 | INFO     | collected zombie processes
[2025-06-05 23:46:51] 2025-06-05 21:44:49,419 | INFO     | will attempt to kill all subprocesses of pid=3967834
[2025-06-05 23:46:51] 2025-06-05 21:44:49,744 | INFO     | process IDs to be killed: [3967834] (in reverse order)
[2025-06-05 23:46:51] 2025-06-05 21:44:49,845 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:46:51] 2025-06-05 21:44:49,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:46:51] 2025-06-05 21:44:49,856 | INFO     | did not find any defunct processes belonging to 3967834
[2025-06-05 23:46:51] 2025-06-05 21:44:49,866 | INFO     | did not find any defunct processes belonging to 3967834
[2025-06-05 23:46:51] 2025-06-05 21:44:49,866 | INFO     | ready for new job
[2025-06-05 23:46:51] 2025-06-05 21:44:49,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:46:51] 2025-06-05 21:44:49,868 | INFO     | **************************************
[2025-06-05 23:46:51] 2025-06-05 21:44:49,868 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:46:51] 2025-06-05 21:44:49,868 | INFO     | **************************************
[2025-06-05 23:46:51] 2025-06-05 21:44:49,869 | INFO     | 
[2025-06-05 23:46:51] 2025-06-05 21:44:49,872 | INFO     | architecture information:
[2025-06-05 23:46:51] 2025-06-05 21:44:49,873 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:46:51] 2025-06-05 21:44:49,886 | INFO     | cat /etc/os-release:
[2025-06-05 23:46:51] NAME="CentOS Linux"
[2025-06-05 23:46:51] VERSION="7 (Core)"
[2025-06-05 23:46:51] ID="centos"
[2025-06-05 23:46:51] ID_LIKE="rhel fedora"
[2025-06-05 23:46:51] VERSION_ID="7"
[2025-06-05 23:46:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:46:51] ANSI_COLOR="0;31"
[2025-06-05 23:46:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:46:51] HOME_URL="https://www.centos.org/"
[2025-06-05 23:46:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:46:51] 
[2025-06-05 23:46:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:46:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:46:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:46:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:46:51] 
[2025-06-05 23:46:51] 2025-06-05 21:44:49,887 | INFO     | **************************************
[2025-06-05 23:46:51] 2025-06-05 21:44:50,390 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-05 23:46:51] 2025-06-05 21:44:50,405 | INFO     | sufficient remaining disk space (670253973504 B)
[2025-06-05 23:46:51] 2025-06-05 21:44:50,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:46:51] 2025-06-05 21:44:50,406 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:46:51] 2025-06-05 21:44:50,406 | INFO     | update_server=False
[2025-06-05 23:46:51] 2025-06-05 21:44:50,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:46:51] 2025-06-05 21:44:50,406 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 23:46:51] 2025-06-05 21:44:50,406 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:46:51] 2025-06-05 21:44:50,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:46:51] 2025-06-05 21:44:50,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:46:51] 2025-06-05 21:44:50,978 | INFO     | all payload control threads have been joined
[2025-06-05 23:46:51] 2025-06-05 21:44:51,132 | INFO     | all job control threads have been joined
[2025-06-05 23:46:51] 2025-06-05 21:44:51,178 | INFO     | all data control threads have been joined
[2025-06-05 23:46:51] 2025-06-05 21:44:51,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:46:51] 2025-06-05 21:44:51,237 | INFO     | aborting loop
[2025-06-05 23:46:51] 2025-06-05 21:44:51,411 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:51,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:46:51] 2025-06-05 21:44:51,483 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:51,648 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:51,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:51,982 | INFO     | [payload] control thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,138 | INFO     | [job] control thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,183 | INFO     | [data] control thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,243 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,292 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,654 | INFO     | [job] validate thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,658 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,902 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:52,950 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:53,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:46:51] 2025-06-05 21:44:53,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:46:51] 2025-06-05 21:44:53,446 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:54,391 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:57,054 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:46:51] 2025-06-05 21:44:58,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22893661443904)>', '<ExcThread(monitor, started 22893423462144)>']
[2025-06-05 23:46:51] 2025-06-05 21:44:58,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:46:51] 2025-06-05 21:44:58,447 | INFO     | [monitor] control thread has ended
[2025-06-05 23:46:51] 2025-06-05 21:45:03,131 | INFO     | all workflow threads have been joined
[2025-06-05 23:46:51] 2025-06-05 21:45:03,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:46:51] 2025-06-05 21:45:03,131 | INFO     | traces error code: 0
[2025-06-05 23:46:51] 2025-06-05 21:45:03,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:46:51] 2025-06-05 21:45:03,260 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:46:51] 2025-06-05 21:45:03,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:46:51] 2025-06-05 21:45:03,266 [wrapper] pilotpid: 3943118
[2025-06-05 23:46:51] 2025-06-05 21:45:03,269 [wrapper] Pilot exit status: 0
[2025-06-05 23:46:51] 2025-06-05 21:45:03,279 [wrapper] pandaids: 6669624248
[2025-06-05 23:46:51] 2025-06-05 21:45:03,348 [wrapper] cleanup supervisor_pilot   73876 3943119
[2025-06-05 23:46:51] 2025-06-05 21:45:03,352 [wrapper] Test setup, not cleaning
[2025-06-05 23:46:51] 2025-06-05 21:45:03,355 [wrapper] apfmon messages muted
[2025-06-05 23:46:51] 2025-06-05 21:45:03,357 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:46:51] 2025-06-05 21:45:03,360 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:46:51]  *** Error codes and diagnostics ***
[2025-06-05 23:46:51]     "exeErrorCode": 0,
[2025-06-05 23:46:51]     "exeErrorDiag": "",
[2025-06-05 23:46:51]     "pilotErrorCode": 0,
[2025-06-05 23:46:51]     "pilotErrorDiag": "",
[2025-06-05 23:46:51]  *** Listing of results directory ***
[2025-06-05 23:46:51] total 411156
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc    495897 May 29 11:08 pilot3.tar.gz
[2025-06-05 23:46:51] -rwx------ 1 boinc boinc     37140 May 29 11:20 runpilot2-wrapper.sh
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc      5111 May 29 11:20 queuedata.json
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc       100 Jun  5 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:46:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 19:36 run_atlas
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc       105 Jun  5 19:36 job.xml
[2025-06-05 23:46:51] -rw-r--r-- 2 boinc boinc 223454868 Jun  5 20:03 EVNT.44871834._003729.pool.root.1
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc      6635 Jun  5 20:03 init_data.xml
[2025-06-05 23:46:51] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:03 start_atlas.sh
[2025-06-05 23:46:51] drwxrwx--x 2 boinc boinc      4096 Jun  5 20:03 shared
[2025-06-05 23:46:51] -rw-r--r-- 2 boinc boinc    508876 Jun  5 20:03 input.tar.gz
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc         0 Jun  5 20:03 boinc_lockfile
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc      2559 Jun  5 20:03 pandaJob.out
[2025-06-05 23:46:51] -rw------- 1 boinc boinc    983229 Jun  5 20:03 agis_schedconf.cvmfs.json
[2025-06-05 23:46:51] drwx------ 4 boinc boinc      4096 Jun  5 20:03 pilot3
[2025-06-05 23:46:51] -rw------- 1 boinc boinc 190621427 Jun  5 23:44 HITS.44871837._098084.pool.root.1
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc       529 Jun  5 23:44 boinc_task_state.xml
[2025-06-05 23:46:51] -rw------- 1 boinc boinc      1037 Jun  5 23:44 memory_monitor_summary.json
[2025-06-05 23:46:51] -rw------- 1 boinc boinc        95 Jun  5 23:44 pilot_heartbeat.json
[2025-06-05 23:46:51] -rw------- 1 boinc boinc   1598969 Jun  5 23:44 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:46:51] -rw------- 1 boinc boinc    323552 Jun  5 23:44 log.44871837._098084.job.log.tgz.1
[2025-06-05 23:46:51] -rw------- 1 boinc boinc      7725 Jun  5 23:44 heartbeat.json
[2025-06-05 23:46:51] -rw------- 1 boinc boinc      4486 Jun  5 23:45 pilotlog.txt
[2025-06-05 23:46:51] -rw------- 1 boinc boinc   1236227 Jun  5 23:45 log.44871837._098084.job.log.1
[2025-06-05 23:46:51] -rw------- 1 boinc boinc       357 Jun  5 23:45 output.list
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc       620 Jun  5 23:45 runtime_log
[2025-06-05 23:46:51] -rw------- 1 boinc boinc   1576960 Jun  5 23:45 result.tar.gz
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc      9026 Jun  5 23:45 runtime_log.err
[2025-06-05 23:46:51] -rw------- 1 boinc boinc       665 Jun  5 23:45 6ZxKDmNcoe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgEeKDmMJ0Scn.diag
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc        27 Jun  5 23:46 wrapper_checkpoint.txt
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc      8192 Jun  5 23:46 boinc_mmap_file
[2025-06-05 23:46:51] -rw-r--r-- 1 boinc boinc     20945 Jun  5 23:46 stderr.txt
[2025-06-05 23:46:51] HITS file was successfully produced:
[2025-06-05 23:46:51] -rw------- 1 boinc boinc 190621427 Jun  5 23:44 shared/HITS.pool.root.1
[2025-06-05 23:46:51]  *** Contents of shared directory: ***
[2025-06-05 23:46:51] total 406440
[2025-06-05 23:46:51] -rw-r--r-- 2 boinc boinc 223454868 Jun  5 20:03 ATLAS.root_0
[2025-06-05 23:46:51] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:03 start_atlas.sh
[2025-06-05 23:46:51] -rw-r--r-- 2 boinc boinc    508876 Jun  5 20:03 input.tar.gz
[2025-06-05 23:46:51] -rw------- 1 boinc boinc 190621427 Jun  5 23:44 HITS.pool.root.1
[2025-06-05 23:46:51] -rw------- 1 boinc boinc   1576960 Jun  5 23:45 result.tar.gz
23:46:53 (3939399): run_atlas exited; CPU time 52089.671319
23:46:53 (3939399): called boinc_finish(0)

</stderr_txt>
]]>

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