Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:27 (1599045): wrapper (7.7.26015): starting
08:52:27 (1599045): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 08:52:27] Arguments: --nthreads 4
[2025-06-04 08:52:27] Threads: 4
[2025-06-04 08:52:27] Checking for CVMFS
[2025-06-04 08:52:27] No cvmfs_config command found, will try listing directly
[2025-06-04 08:52:27] CVMFS is ok
[2025-06-04 08:52:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:52:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:52:27] Further information can be found at the LHC@home message board.
[2025-06-04 08:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:52:27] Checking for apptainer binary...
[2025-06-04 08:52:27] which: no apptainer in ((null))
[2025-06-04 08:52:27] apptainer is not installed, using version from CVMFS
[2025-06-04 08:52:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:52:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-04 08:52:27] apptainer works
[2025-06-04 08:52:27] Set ATHENA_PROC_NUMBER=4
[2025-06-04 08:52:27] Set ATHENA_CORE_NUMBER=4
[2025-06-04 08:52:27] Starting ATLAS job with PandaID=6671151281
[2025-06-04 08:52:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:07:23]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:07:23] 2025-06-04 10:05:00,324 | INFO     | executing command: lscpu
[2025-06-04 12:07:23] 2025-06-04 10:05:00,440 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:07:23] 2025-06-04 10:05:01,912 | INFO     | monitor loop #797: job 0:6671151281 is in state 'finished'
[2025-06-04 12:07:23] 2025-06-04 10:05:01,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:07:23] 2025-06-04 10:05:04,415 | INFO     | monitor loop #798: job 0:6671151281 is in state 'finished'
[2025-06-04 12:07:23] 2025-06-04 10:05:04,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:07:23] 2025-06-04 10:05:06,567 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:07:23] 2025-06-04 10:05:06,568 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6671151281/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:07:23] 2025-06-04 10:05:06,569 | INFO     | extracted standard info from prmon json
[2025-06-04 12:07:23] 2025-06-04 10:05:06,569 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:07:23] 2025-06-04 10:05:06,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:07:23] 2025-06-04 10:05:06,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:07:23] 2025-06-04 10:05:06,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:07:23] 2025-06-04 10:05:06,574 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:07:23] 2025-06-04 10:05:06,574 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,575 | INFO     | sum of deviations: 24146344432.000008
[2025-06-04 12:07:23] 2025-06-04 10:05:06,575 | INFO     | mean x: 1749025729.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,575 | INFO     | mean y: 2310206.492063492
[2025-06-04 12:07:23] 2025-06-04 10:05:06,575 | INFO     | -- intersect: -20171870708.51515
[2025-06-04 12:07:23] 2025-06-04 10:05:06,575 | INFO     | intersect: -20171870708.51515
[2025-06-04 12:07:23] 2025-06-04 10:05:06,576 | INFO     | chi2: 1.5518693457645887
[2025-06-04 12:07:23] 2025-06-04 10:05:06,576 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,577 | INFO     | sum of deviations: 23356362986.500004
[2025-06-04 12:07:23] 2025-06-04 10:05:06,577 | INFO     | mean x: 1749025576.5
[2025-06-04 12:07:23] 2025-06-04 10:05:06,577 | INFO     | mean y: 2309462.788043478
[2025-06-04 12:07:23] 2025-06-04 10:05:06,577 | INFO     | -- intersect: -21146324049.461876
[2025-06-04 12:07:23] 2025-06-04 10:05:06,577 | INFO     | intersect: -21146324049.461876
[2025-06-04 12:07:23] 2025-06-04 10:05:06,578 | INFO     | chi2: 1.5530851882356322
[2025-06-04 12:07:23] 2025-06-04 10:05:06,578 | INFO     | current chi2=1.5530851882356322 (change=-0.07834696099654756 %)
[2025-06-04 12:07:23] 2025-06-04 10:05:06,578 | INFO     | right removable region: 183
[2025-06-04 12:07:23] 2025-06-04 10:05:06,578 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,579 | INFO     | sum of deviations: -4015540909.500001
[2025-06-04 12:07:23] 2025-06-04 10:05:06,579 | INFO     | mean x: 1749025881.5
[2025-06-04 12:07:23] 2025-06-04 10:05:06,579 | INFO     | mean y: 2336439.6141304346
[2025-06-04 12:07:23] 2025-06-04 10:05:06,579 | INFO     | -- intersect: 3638314263.1603293
[2025-06-04 12:07:23] 2025-06-04 10:05:06,579 | INFO     | intersect: 3638314263.1603293
[2025-06-04 12:07:23] 2025-06-04 10:05:06,580 | INFO     | chi2: 0.017769431570133238
[2025-06-04 12:07:23] 2025-06-04 10:05:06,580 | INFO     | current chi2=0.017769431570133238 (change=98.85496600479736 %)
[2025-06-04 12:07:23] 2025-06-04 10:05:06,580 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,581 | INFO     | sum of deviations: -2957244070.999999
[2025-06-04 12:07:23] 2025-06-04 10:05:06,581 | INFO     | mean x: 1749026034.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,581 | INFO     | mean y: 2335382.5754189943
[2025-06-04 12:07:23] 2025-06-04 10:05:06,581 | INFO     | -- intersect: 2910771179.709643
[2025-06-04 12:07:23] 2025-06-04 10:05:06,581 | INFO     | intersect: 2910771179.709643
[2025-06-04 12:07:23] 2025-06-04 10:05:06,582 | INFO     | chi2: 0.016864255518645788
[2025-06-04 12:07:23] 2025-06-04 10:05:06,582 | INFO     | current chi2=0.016864255518645788 (change=5.094006794279594 %)
[2025-06-04 12:07:23] 2025-06-04 10:05:06,582 | INFO     | left removable region: 20
[2025-06-04 12:07:23] 2025-06-04 10:05:06,582 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,583 | INFO     | sum of deviations: 466357382.99999887
[2025-06-04 12:07:23] 2025-06-04 10:05:06,583 | INFO     | mean x: 1749026156.0
[2025-06-04 12:07:23] 2025-06-04 10:05:06,583 | INFO     | mean y: 2331251.337423313
[2025-06-04 12:07:23] 2025-06-04 10:05:06,583 | INFO     | -- intersect: -605090402.3564564
[2025-06-04 12:07:23] 2025-06-04 10:05:06,583 | INFO     | intersect: -605090402.3564564
[2025-06-04 12:07:23] 2025-06-04 10:05:06,584 | INFO     | chi2: 0.009269081637262436
[2025-06-04 12:07:23] 2025-06-04 10:05:06,584 | INFO     | -- intersect: -605090402.3564564
[2025-06-04 12:07:23] 2025-06-04 10:05:06,584 | INFO     | current memory leak: 0.35 B/s (using 163 data points, chi2=0.01)
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | ..............................
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . Timing measurements:
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . get job = 0 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . initial setup = 1 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . payload setup = 9 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . stage-in = 0 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . payload execution = 11505 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . stage-out = 1 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | . log creation = 0 s
[2025-06-04 12:07:23] 2025-06-04 10:05:06,585 | INFO     | ..............................
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | 
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | job summary report
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | --------------------------------------------------
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | PanDA job id: 6671151281
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | task id: 44871837
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | errors: (none)
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | pilot state: finished 
[2025-06-04 12:07:23] 2025-06-04 10:05:07,157 | INFO     | transexitcode: 0
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | exeerrorcode: 0
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | exeerrordiag: 
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | exitcode: 0
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | exitmsg: OK
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | cpuconsumptiontime: 43765 s
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | nevents: 400
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | neventsw: 0
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | pid: 1610384
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | pgrp: 1610384
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | corecount: 4
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | event service: False
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | sizes: {0: 2405196, 7: 2405402, 11: 2405430, 11519: 2435093, 11520: 2444058, 11523: 2444114, 11529: 2444412}
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | --------------------------------------------------
[2025-06-04 12:07:23] 2025-06-04 10:05:07,158 | INFO     | 
[2025-06-04 12:07:23] 2025-06-04 10:05:07,159 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:07:23] 2025-06-04 10:05:07,189 | INFO     | job 6671151281 has completed (purged errors)
[2025-06-04 12:07:23] 2025-06-04 10:05:07,189 | INFO     | overall cleanup function is called
[2025-06-04 12:07:23] 2025-06-04 10:05:08,198 | INFO     | --- collectZombieJob: --- 10, [1610384]
[2025-06-04 12:07:23] 2025-06-04 10:05:08,198 | INFO     | zombie collector waiting for pid 1610384
[2025-06-04 12:07:23] 2025-06-04 10:05:08,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:07:23] 2025-06-04 10:05:08,198 | INFO     | collected zombie processes
[2025-06-04 12:07:23] 2025-06-04 10:05:08,198 | INFO     | will attempt to kill all subprocesses of pid=1610384
[2025-06-04 12:07:23] 2025-06-04 10:05:08,848 | INFO     | process IDs to be killed: [1610384] (in reverse order)
[2025-06-04 12:07:23] 2025-06-04 10:05:09,090 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:07:23] 2025-06-04 10:05:09,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:07:23] 2025-06-04 10:05:09,116 | INFO     | did not find any defunct processes belonging to 1610384
[2025-06-04 12:07:23] 2025-06-04 10:05:09,138 | INFO     | did not find any defunct processes belonging to 1610384
[2025-06-04 12:07:23] 2025-06-04 10:05:09,138 | INFO     | ready for new job
[2025-06-04 12:07:23] 2025-06-04 10:05:09,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:07:23] 2025-06-04 10:05:09,141 | INFO     | **************************************
[2025-06-04 12:07:23] 2025-06-04 10:05:09,141 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:07:23] 2025-06-04 10:05:09,141 | INFO     | **************************************
[2025-06-04 12:07:23] 2025-06-04 10:05:09,141 | INFO     | 
[2025-06-04 12:07:23] 2025-06-04 10:05:09,149 | INFO     | architecture information:
[2025-06-04 12:07:23] 2025-06-04 10:05:09,149 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:07:23] 2025-06-04 10:05:09,175 | INFO     | cat /etc/os-release:
[2025-06-04 12:07:23] NAME="CentOS Linux"
[2025-06-04 12:07:23] VERSION="7 (Core)"
[2025-06-04 12:07:23] ID="centos"
[2025-06-04 12:07:23] ID_LIKE="rhel fedora"
[2025-06-04 12:07:23] VERSION_ID="7"
[2025-06-04 12:07:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:07:23] ANSI_COLOR="0;31"
[2025-06-04 12:07:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:07:23] HOME_URL="https://www.centos.org/"
[2025-06-04 12:07:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:07:23] 
[2025-06-04 12:07:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:07:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:07:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:07:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:07:23] 
[2025-06-04 12:07:23] 2025-06-04 10:05:09,175 | INFO     | **************************************
[2025-06-04 12:07:23] 2025-06-04 10:05:09,678 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-04 12:07:23] 2025-06-04 10:05:09,703 | INFO     | sufficient remaining disk space (3247343403008 B)
[2025-06-04 12:07:23] 2025-06-04 10:05:09,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:07:23] 2025-06-04 10:05:09,703 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:07:23] 2025-06-04 10:05:09,703 | INFO     | update_server=False
[2025-06-04 12:07:23] 2025-06-04 10:05:09,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:07:23] 2025-06-04 10:05:09,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:07:23] 2025-06-04 10:05:09,704 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:07:23] 2025-06-04 10:05:09,705 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:07:23] 2025-06-04 10:05:09,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:07:23] 2025-06-04 10:05:09,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:07:23] 2025-06-04 10:05:10,310 | INFO     | all job control threads have been joined
[2025-06-04 12:07:23] 2025-06-04 10:05:10,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:07:23] 2025-06-04 10:05:10,425 | INFO     | aborting loop
[2025-06-04 12:07:23] 2025-06-04 10:05:10,709 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:10,767 | INFO     | all data control threads have been joined
[2025-06-04 12:07:23] 2025-06-04 10:05:10,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:07:23] 2025-06-04 10:05:10,863 | INFO     | all payload control threads have been joined
[2025-06-04 12:07:23] 2025-06-04 10:05:10,941 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,166 | INFO     | [job] validate thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,315 | INFO     | [job] control thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,430 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,556 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,694 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,695 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:07:23] 2025-06-04 10:05:11,699 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,709 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,772 | INFO     | [data] control thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,868 | INFO     | [payload] control thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:11,956 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:12,701 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:14,827 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:20,315 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:07:23] 2025-06-04 10:05:21,317 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:07:23] 2025-06-04 10:05:23,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22465054349120)>', '<ExcThread(monitor, started 22464746723072)>']
[2025-06-04 12:07:23] 2025-06-04 10:05:23,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:07:23] 2025-06-04 10:05:23,771 | INFO     | [monitor] control thread has ended
[2025-06-04 12:07:23] 2025-06-04 10:05:28,191 | INFO     | all workflow threads have been joined
[2025-06-04 12:07:23] 2025-06-04 10:05:28,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:07:23] 2025-06-04 10:05:28,191 | INFO     | traces error code: 0
[2025-06-04 12:07:23] 2025-06-04 10:05:28,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:07:23] 2025-06-04 10:05:28,325 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:07:23] 2025-06-04 10:05:28,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:07:23] 2025-06-04 10:05:28,334 [wrapper] pilotpid: 1602948
[2025-06-04 12:07:23] 2025-06-04 10:05:28,338 [wrapper] Pilot exit status: 0
[2025-06-04 12:07:23] 2025-06-04 10:05:28,353 [wrapper] pandaids: 6671151281
[2025-06-04 12:07:23] 2025-06-04 10:05:28,513 [wrapper] cleanup supervisor_pilot 2083801 1602949
[2025-06-04 12:07:23] 2025-06-04 10:05:28,517 [wrapper] Test setup, not cleaning
[2025-06-04 12:07:23] 2025-06-04 10:05:28,522 [wrapper] apfmon messages muted
[2025-06-04 12:07:23] 2025-06-04 10:05:28,526 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:07:23] 2025-06-04 10:05:28,530 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:07:23]  *** Error codes and diagnostics ***
[2025-06-04 12:07:23]     "exeErrorCode": 0,
[2025-06-04 12:07:23]     "exeErrorDiag": "",
[2025-06-04 12:07:23]     "pilotErrorCode": 0,
[2025-06-04 12:07:23]     "pilotErrorDiag": "",
[2025-06-04 12:07:23]  *** Listing of results directory ***
[2025-06-04 12:07:23] total 418488
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc    495897 May 29 14:12 pilot3.tar.gz
[2025-06-04 12:07:23] -rwx------ 1 boinc boinc     37140 May 29 14:23 runpilot2-wrapper.sh
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc      5111 May 29 14:23 queuedata.json
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc       100 Jun  4 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:07:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 08:52 run_atlas
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc       105 Jun  4 08:52 job.xml
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc      6688 Jun  4 08:52 init_data.xml
[2025-06-04 12:07:23] -rw-r--r-- 2 boinc boinc 224967949 Jun  4 08:52 EVNT.44871834._001713.pool.root.1
[2025-06-04 12:07:23] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:52 start_atlas.sh
[2025-06-04 12:07:23] drwxrwx--x 2 boinc boinc      4096 Jun  4 08:52 shared
[2025-06-04 12:07:23] -rw-r--r-- 2 boinc boinc    508885 Jun  4 08:52 input.tar.gz
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc         0 Jun  4 08:52 boinc_lockfile
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc      2559 Jun  4 08:52 pandaJob.out
[2025-06-04 12:07:23] -rw------- 1 boinc boinc    986745 Jun  4 08:52 agis_schedconf.cvmfs.json
[2025-06-04 12:07:23] drwx------ 4 boinc boinc      4096 Jun  4 08:52 pilot3
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc       530 Jun  4 12:04 boinc_task_state.xml
[2025-06-04 12:07:23] -rw------- 1 boinc boinc 196938577 Jun  4 12:04 HITS.44871837._100068.pool.root.1
[2025-06-04 12:07:23] -rw------- 1 boinc boinc        95 Jun  4 12:04 pilot_heartbeat.json
[2025-06-04 12:07:23] -rw------- 1 boinc boinc      1031 Jun  4 12:04 memory_monitor_summary.json
[2025-06-04 12:07:23] -rw------- 1 boinc boinc   1603667 Jun  4 12:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:07:23] -rw------- 1 boinc boinc    326299 Jun  4 12:04 log.44871837._100068.job.log.tgz.1
[2025-06-04 12:07:23] -rw------- 1 boinc boinc      7706 Jun  4 12:05 heartbeat.json
[2025-06-04 12:07:23] -rw------- 1 boinc boinc      4560 Jun  4 12:05 pilotlog.txt
[2025-06-04 12:07:23] -rw------- 1 boinc boinc   1071586 Jun  4 12:05 log.44871837._100068.job.log.1
[2025-06-04 12:07:23] -rw------- 1 boinc boinc       357 Jun  4 12:05 output.list
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:05 runtime_log
[2025-06-04 12:07:23] -rw------- 1 boinc boinc   1413120 Jun  4 12:05 result.tar.gz
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc      9041 Jun  4 12:05 runtime_log.err
[2025-06-04 12:07:23] -rw------- 1 boinc boinc       666 Jun  4 12:05 kkBMDm7Sre7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhXeKDm8rq17m.diag
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:07 wrapper_checkpoint.txt
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:07 boinc_mmap_file
[2025-06-04 12:07:23] -rw-r--r-- 1 boinc boinc     20937 Jun  4 12:07 stderr.txt
[2025-06-04 12:07:23] HITS file was successfully produced:
[2025-06-04 12:07:23] -rw------- 1 boinc boinc 196938577 Jun  4 12:04 shared/HITS.pool.root.1
[2025-06-04 12:07:23]  *** Contents of shared directory: ***
[2025-06-04 12:07:23] total 413924
[2025-06-04 12:07:23] -rw-r--r-- 2 boinc boinc 224967949 Jun  4 08:52 ATLAS.root_0
[2025-06-04 12:07:23] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:52 start_atlas.sh
[2025-06-04 12:07:23] -rw-r--r-- 2 boinc boinc    508885 Jun  4 08:52 input.tar.gz
[2025-06-04 12:07:23] -rw------- 1 boinc boinc 196938577 Jun  4 12:04 HITS.pool.root.1
[2025-06-04 12:07:23] -rw------- 1 boinc boinc   1413120 Jun  4 12:05 result.tar.gz
12:07:24 (1599045): run_atlas exited; CPU time 44415.058845
12:07:24 (1599045): called boinc_finish(0)

</stderr_txt>
]]>

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