Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:52:55 (2824959): wrapper (7.7.26015): starting
15:52:55 (2824959): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 15:52:55] Arguments: --nthreads 12
[2025-05-30 15:52:55] Threads: 12
[2025-05-30 15:52:55] Checking for CVMFS
[2025-05-30 15:52:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 15:52:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 15:52:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 15:52:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 15:52:57] 2.12.7.0 125570 9128 70696 146604 1 187 3378068 4096001 1575 130560 0 18994614 99.996 2219552 1094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-30 15:52:57] CVMFS is ok
[2025-05-30 15:52:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 15:52:57] Checking for apptainer binary...
[2025-05-30 15:52:57] apptainer is not installed, using version from CVMFS
[2025-05-30 15:52:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 15:52:58] ryzen7
[2025-05-30 15:52:58] apptainer works
[2025-05-30 15:52:58] Set ATHENA_PROC_NUMBER=12
[2025-05-30 15:52:58] Set ATHENA_CORE_NUMBER=12
[2025-05-30 15:52:58] Starting ATLAS job with PandaID=6671056786
[2025-05-30 15:52:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 17:54:42]  *** The last 200 lines of the pilot log: ***
[2025-05-30 17:54:42] 2025-05-30 17:54:27,454 | INFO     | sum of deviations: 30305356137.000004
[2025-05-30 17:54:42] 2025-05-30 17:54:27,454 | INFO     | mean x: 1748623885.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,454 | INFO     | mean y: 2599914.5398230087
[2025-05-30 17:54:42] 2025-05-30 17:54:27,454 | INFO     | -- intersect: -118447670583.2573
[2025-05-30 17:54:42] 2025-05-30 17:54:27,454 | INFO     | intersect: -118447670583.2573
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | chi2: 1.7697014801801298
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | current chi2=1.7697014801801298 (change=0.05451429736149457 %)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | right removable region: 112
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | sum of square deviations: 447383272.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | sum of deviations: 9797232936.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | mean x: 1748624190.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | mean y: 2657842.690265487
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | -- intersect: -38290411163.59641
[2025-05-30 17:54:42] 2025-05-30 17:54:27,455 | INFO     | intersect: -38290411163.59641
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | chi2: 0.111155942395889
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | current chi2=0.111155942395889 (change=93.7223679948774 %)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | sum of square deviations: 390582207.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | sum of deviations: 3196934726.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | mean x: 1748624342.5
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | mean y: 2675570.8518518517
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | -- intersect: -14309901354.259249
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | intersect: -14309901354.259249
[2025-05-30 17:54:42] 2025-05-30 17:54:27,456 | INFO     | chi2: 0.024025977078388737
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | current chi2=0.024025977078388737 (change=78.38534174554637 %)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | sum of square deviations: 338804492.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | sum of deviations: 2346244586.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | mean x: 1748624495.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | mean y: 2677905.504854369
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | -- intersect: -12106667900.750671
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | intersect: -12106667900.750671
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | chi2: 0.0019829926413946716
[2025-05-30 17:54:42] 2025-05-30 17:54:27,457 | INFO     | current chi2=0.0019829926413946716 (change=91.74646410872353 %)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | sum of square deviations: 291817564.5
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | sum of deviations: 2079828428.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | mean x: 1748624647.5
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | mean y: 2678790.3469387754
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | -- intersect: -12460036598.301228
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | intersect: -12460036598.301228
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | chi2: 0.0002844261972869678
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | current chi2=0.0002844261972869678 (change=85.6567194779439 %)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,458 | INFO     | sum of square deviations: 249388862.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | sum of deviations: 1716232742.9999993
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | mean x: 1748624800.0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | mean y: 2680095.698924731
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | -- intersect: -12030925226.185198
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | intersect: -12030925226.185198
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | chi2: 0.00026920389804409084
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | current chi2=0.00026920389804409084 (change=5.35193290494217 %)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | left removable region: 50
[2025-05-30 17:54:42] 2025-05-30 17:54:27,459 | INFO     | sum of square deviations: 73882315.5
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | sum of deviations: 426502209.49999994
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | mean x: 1748625379.5
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | mean y: 2684586.564516129
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | -- intersect: -10091646958.100267
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | intersect: -10091646958.100267
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | chi2: 0.0001853059971820546
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | -- intersect: -10091646958.100267
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | current memory leak: 5.77 B/s (using 62 data points, chi2=0.00)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | ..............................
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | . Timing measurements:
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | . get job = 0 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | . initial setup = 1 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,460 | INFO     | . payload setup = 4 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,461 | INFO     | . stage-in = 0 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,461 | INFO     | . payload execution = 7212 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,461 | INFO     | . stage-out = 1 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,461 | INFO     | . log creation = 0 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,461 | INFO     | ..............................
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | 
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | job summary report
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | --------------------------------------------------
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | PanDA job id: 6671056786
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | task id: 44871837
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | errors: (none)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | pilot state: finished 
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | transexitcode: 0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | exeerrorcode: 0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | exeerrordiag: 
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | exitcode: 0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | exitmsg: OK
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | cpuconsumptiontime: 30591 s
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | nevents: 400
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | neventsw: 0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | pid: 2835241
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | pgrp: 2835241
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | corecount: 12
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | event service: False
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | sizes: {0: 2405206, 3: 2405412, 11: 2405440, 7221: 2432631, 7224: 2441618, 7226: 2441674, 7253: 2441972}
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | --------------------------------------------------
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | 
[2025-05-30 17:54:42] 2025-05-30 17:54:27,551 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 17:54:42] 2025-05-30 17:54:27,635 | INFO     | job 6671056786 has completed (purged errors)
[2025-05-30 17:54:42] 2025-05-30 17:54:27,636 | INFO     | overall cleanup function is called
[2025-05-30 17:54:42] 2025-05-30 17:54:28,646 | INFO     | --- collectZombieJob: --- 10, [2835241]
[2025-05-30 17:54:42] 2025-05-30 17:54:28,646 | INFO     | zombie collector waiting for pid 2835241
[2025-05-30 17:54:42] 2025-05-30 17:54:28,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 17:54:42] 2025-05-30 17:54:28,646 | INFO     | collected zombie processes
[2025-05-30 17:54:42] 2025-05-30 17:54:28,646 | INFO     | will attempt to kill all subprocesses of pid=2835241
[2025-05-30 17:54:42] 2025-05-30 17:54:28,790 | INFO     | process IDs to be killed: [2835241] (in reverse order)
[2025-05-30 17:54:42] 2025-05-30 17:54:28,910 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 17:54:42] 2025-05-30 17:54:28,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 17:54:42] 2025-05-30 17:54:28,912 | INFO     | did not find any defunct processes belonging to 2835241
[2025-05-30 17:54:42] 2025-05-30 17:54:28,914 | INFO     | did not find any defunct processes belonging to 2835241
[2025-05-30 17:54:42] 2025-05-30 17:54:28,914 | INFO     | ready for new job
[2025-05-30 17:54:42] 2025-05-30 17:54:28,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 17:54:42] 2025-05-30 17:54:28,915 | INFO     | **************************************
[2025-05-30 17:54:42] 2025-05-30 17:54:28,916 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 17:54:42] 2025-05-30 17:54:28,916 | INFO     | **************************************
[2025-05-30 17:54:42] 2025-05-30 17:54:28,916 | INFO     | 
[2025-05-30 17:54:42] 2025-05-30 17:54:28,938 | INFO     | architecture information:
[2025-05-30 17:54:42] 2025-05-30 17:54:28,939 | INFO     | executing command: cat /etc/os-release
[2025-05-30 17:54:42] 2025-05-30 17:54:28,966 | INFO     | cat /etc/os-release:
[2025-05-30 17:54:42] NAME="CentOS Linux"
[2025-05-30 17:54:42] VERSION="7 (Core)"
[2025-05-30 17:54:42] ID="centos"
[2025-05-30 17:54:42] ID_LIKE="rhel fedora"
[2025-05-30 17:54:42] VERSION_ID="7"
[2025-05-30 17:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 17:54:42] ANSI_COLOR="0;31"
[2025-05-30 17:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 17:54:42] HOME_URL="https://www.centos.org/"
[2025-05-30 17:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 17:54:42] 
[2025-05-30 17:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 17:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 17:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 17:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 17:54:42] 
[2025-05-30 17:54:42] 2025-05-30 17:54:28,966 | INFO     | **************************************
[2025-05-30 17:54:42] 2025-05-30 17:54:29,474 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-05-30 17:54:42] 2025-05-30 17:54:29,514 | INFO     | sufficient remaining disk space (184230608896 B)
[2025-05-30 17:54:42] 2025-05-30 17:54:29,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 17:54:42] 2025-05-30 17:54:29,514 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 17:54:42] 2025-05-30 17:54:29,514 | INFO     | update_server=False
[2025-05-30 17:54:42] 2025-05-30 17:54:29,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 17:54:42] 2025-05-30 17:54:29,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 17:54:42] 2025-05-30 17:54:29,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 17:54:42] 2025-05-30 17:54:29,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 17:54:42] 2025-05-30 17:54:29,526 | INFO     | aborting loop
[2025-05-30 17:54:42] 2025-05-30 17:54:29,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 17:54:42] 2025-05-30 17:54:30,230 | INFO     | all data control threads have been joined
[2025-05-30 17:54:42] 2025-05-30 17:54:30,282 | INFO     | all job control threads have been joined
[2025-05-30 17:54:42] 2025-05-30 17:54:30,286 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 17:54:42] 2025-05-30 17:54:30,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 17:54:42] 2025-05-30 17:54:30,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 17:54:42] 2025-05-30 17:54:30,494 | INFO     | all payload control threads have been joined
[2025-05-30 17:54:42] 2025-05-30 17:54:30,522 | INFO     | [job] retrieve thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:30,534 | INFO     | [job] job monitor thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:30,534 | INFO     | [job] queue monitor thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:30,690 | INFO     | [payload] validate_post thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,206 | INFO     | [payload] failed_post thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,238 | INFO     | [data] control thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,290 | INFO     | [job] control thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,310 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,502 | INFO     | [payload] control thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,503 | INFO     | [job] validate thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,530 | INFO     | [data] copytool_out thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,566 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,758 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,946 | INFO     | [data] copytool_in thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:31,982 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:33,542 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 17:54:42] 2025-05-30 17:54:35,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075207546688)>', '<ExcThread(monitor, started 140074779928320)>']
[2025-05-30 17:54:42] 2025-05-30 17:54:36,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 17:54:42] 2025-05-30 17:54:36,330 | INFO     | [monitor] control thread has ended
[2025-05-30 17:54:42] 2025-05-30 17:54:40,674 | INFO     | all workflow threads have been joined
[2025-05-30 17:54:42] 2025-05-30 17:54:40,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 17:54:42] 2025-05-30 17:54:40,674 | INFO     | traces error code: 0
[2025-05-30 17:54:42] 2025-05-30 17:54:40,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 17:54:42] 2025-05-30 17:54:40,826 [wrapper] ==== pilot stdout END ====
[2025-05-30 17:54:42] 2025-05-30 17:54:40,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 17:54:42] 2025-05-30 17:54:40,942 [wrapper] pilotpid: 2828662
[2025-05-30 17:54:42] 2025-05-30 17:54:41,002 [wrapper] Pilot exit status: 0
[2025-05-30 17:54:42] 2025-05-30 17:54:41,202 [wrapper] pandaids: 6671056786
[2025-05-30 17:54:42] 2025-05-30 17:54:41,526 [wrapper] cleanup supervisor_pilot 2901326 2828663
[2025-05-30 17:54:42] 2025-05-30 17:54:41,582 [wrapper] Test setup, not cleaning
[2025-05-30 17:54:42] 2025-05-30 17:54:41,618 [wrapper] apfmon messages muted
[2025-05-30 17:54:42] 2025-05-30 17:54:41,654 [wrapper] ==== wrapper stdout END ====
[2025-05-30 17:54:42] 2025-05-30 17:54:41,710 [wrapper] ==== wrapper stderr END ====
[2025-05-30 17:54:42]  *** Error codes and diagnostics ***
[2025-05-30 17:54:42]     "exeErrorCode": 0,
[2025-05-30 17:54:42]     "exeErrorDiag": "",
[2025-05-30 17:54:42]     "pilotErrorCode": 0,
[2025-05-30 17:54:42]     "pilotErrorDiag": "",
[2025-05-30 17:54:42]  *** Listing of results directory ***
[2025-05-30 17:54:42] total 413712
[2025-05-30 17:54:42] -rwx------ 1 boinc boinc     37140 Mai 29 12:12 runpilot2-wrapper.sh
[2025-05-30 17:54:42] -rw-r--r-- 1 boinc boinc      5111 Mai 29 12:12 queuedata.json
[2025-05-30 17:54:42] -rw-r--r-- 1 boinc boinc    495897 Mai 29 12:12 pilot3.tar.gz
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc       100 Mai 30 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 17:54:42] -rwxr-xr-x 1 boinc boinc      7986 Mai 30 15:52 run_atlas
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc       105 Mai 30 15:52 job.xml
[2025-05-30 17:54:42] -rw-r--r-- 2 boinc boinc     15093 Mai 30 15:52 start_atlas.sh
[2025-05-30 17:54:42] drwxrwx--x 2 boinc boinc      4096 Mai 30 15:52 shared
[2025-05-30 17:54:42] -rw-r--r-- 2 boinc boinc    508875 Mai 30 15:52 input.tar.gz
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc      9704 Mai 30 15:52 init_data.xml
[2025-05-30 17:54:42] -rw-r--r-- 2 boinc boinc 223229863 Mai 30 15:52 EVNT.44871834._003006.pool.root.1
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc         0 Mai 30 15:52 boinc_lockfile
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc      2558 Mai 30 15:52 pandaJob.out
[2025-05-30 17:54:42] -rw------- 1 boinc boinc    987377 Mai 30 15:53 agis_schedconf.cvmfs.json
[2025-05-30 17:54:42] -rw------- 1 boinc boinc   1603667 Mai 30 15:53 agis_ddmendpoints.agis.ALL.json
[2025-05-30 17:54:42] drwx------ 4 boinc boinc      4096 Mai 30 15:53 pilot3
[2025-05-30 17:54:42] -rw------- 1 boinc boinc 194357978 Mai 30 17:53 HITS.44871837._099974.pool.root.1
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc       530 Mai 30 17:53 boinc_task_state.xml
[2025-05-30 17:54:42] -rw------- 1 boinc boinc        95 Mai 30 17:53 pilot_heartbeat.json
[2025-05-30 17:54:42] -rw------- 1 boinc boinc      1015 Mai 30 17:53 memory_monitor_summary.json
[2025-05-30 17:54:42] -rw------- 1 boinc boinc    378791 Mai 30 17:53 log.44871837._099974.job.log.tgz.1
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc      8192 Mai 30 17:54 boinc_mmap_file
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc        27 Mai 30 17:54 wrapper_checkpoint.txt
[2025-05-30 17:54:42] -rw------- 1 boinc boinc      7649 Mai 30 17:54 heartbeat.json
[2025-05-30 17:54:42] -rw------- 1 boinc boinc      4377 Mai 30 17:54 pilotlog.txt
[2025-05-30 17:54:42] -rw------- 1 boinc boinc    723974 Mai 30 17:54 log.44871837._099974.job.log.1
[2025-05-30 17:54:42] -rw------- 1 boinc boinc       357 Mai 30 17:54 output.list
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc       620 Mai 30 17:54 runtime_log
[2025-05-30 17:54:42] -rw------- 1 boinc boinc   1126400 Mai 30 17:54 result.tar.gz
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc      8953 Mai 30 17:54 runtime_log.err
[2025-05-30 17:54:42] -rw------- 1 boinc boinc       648 Mai 30 17:54 c9xLDmPIre7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFBVKDm9DifZm.diag
[2025-05-30 17:54:42] -rw-rw-r-- 1 boinc boinc     20508 Mai 30 17:54 stderr.txt
[2025-05-30 17:54:42] HITS file was successfully produced:
[2025-05-30 17:54:42] -rw------- 1 boinc boinc 194357978 Mai 30 17:53 shared/HITS.pool.root.1
[2025-05-30 17:54:42]  *** Contents of shared directory: ***
[2025-05-30 17:54:42] total 409428
[2025-05-30 17:54:42] -rw-r--r-- 2 boinc boinc     15093 Mai 30 15:52 start_atlas.sh
[2025-05-30 17:54:42] -rw-r--r-- 2 boinc boinc    508875 Mai 30 15:52 input.tar.gz
[2025-05-30 17:54:42] -rw-r--r-- 2 boinc boinc 223229863 Mai 30 15:52 ATLAS.root_0
[2025-05-30 17:54:42] -rw------- 1 boinc boinc 194357978 Mai 30 17:53 HITS.pool.root.1
[2025-05-30 17:54:42] -rw------- 1 boinc boinc   1126400 Mai 30 17:54 result.tar.gz
17:54:44 (2824959): run_atlas exited; CPU time 30626.291979
17:54:44 (2824959): called boinc_finish(0)

</stderr_txt>
]]>

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