Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:25:24 (219286): wrapper (7.7.26015): starting
12:25:24 (219286): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 12:25:24] Arguments: --nthreads 12
[2025-05-30 12:25:24] Threads: 12
[2025-05-30 12:25:24] Checking for CVMFS
[2025-05-30 12:25:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 12:25:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 12:25:24] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 12:25:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 12:25:24] 2.12.7.0 8631 166 61060 146596 2 56 39637692 46080001 922 130560 0 368454 99.995 74089 23131 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-30 12:25:24] CVMFS is ok
[2025-05-30 12:25:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 12:25:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 12:25:24] Further information can be found at the LHC@home message board.
[2025-05-30 12:25:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 12:25:24] Checking for apptainer binary...
[2025-05-30 12:25:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 12:25:24] Running /usr/bin/apptainer --version
[2025-05-30 12:25:24] apptainer version 1.4.1-1.el9
[2025-05-30 12:25:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 12:25:25] gpu01.farm.particle.cz
[2025-05-30 12:25:25] apptainer works
[2025-05-30 12:25:25] Set ATHENA_PROC_NUMBER=12
[2025-05-30 12:25:25] Set ATHENA_CORE_NUMBER=12
[2025-05-30 12:25:25] Starting ATLAS job with PandaID=6670986451
[2025-05-30 12:25:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 13:22:34]  *** The last 200 lines of the pilot log: ***
[2025-05-30 13:22:34]  filetype=log
[2025-05-30 13:22:34]  guid=8cde2187-b2dc-46d6-829b-d54eb957487f
[2025-05-30 13:22:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-30 13:22:34]  is_altstaged=None
[2025-05-30 13:22:34]  is_tar=False
[2025-05-30 13:22:34]  lfn=log.44871837._099899.job.log.tgz.1
[2025-05-30 13:22:34]  mtime=0
[2025-05-30 13:22:34]  protocol_id=None
[2025-05-30 13:22:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-30 13:22:34]  replicas=None
[2025-05-30 13:22:34]  scope=mc23_13p6TeV
[2025-05-30 13:22:34]  status=None
[2025-05-30 13:22:34]  status_code=0
[2025-05-30 13:22:34]  storage_token=
[2025-05-30 13:22:34]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6670986451/log.44871837._099899.job.log.tgz.1
[2025-05-30 13:22:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/79/log.44871837._099899.job.log.tgz.1
[2025-05-30 13:22:34]  workdir=None
[2025-05-30 13:22:34] ]
[2025-05-30 13:22:34] 2025-05-30 11:22:16,982 | INFO     | transferring file log.44871837._099899.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6670986451/log.44871837._099899.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-30 13:22:34] 2025-05-30 11:22:16,982 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6670986451/log.44871837._099899.job.log.tgz.1 /var/lib/boinc/slots/2/log.44871837._099899.job
[2025-05-30 13:22:34] 2025-05-30 11:22:16,995 | INFO     | adding to output.list: log.44871837._099899.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/79/log.44871837._099899.job.log.tg
[2025-05-30 13:22:34] 2025-05-30 11:22:16,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-30 13:22:34] 2025-05-30 11:22:16,996 | INFO     | summary of transferred files:
[2025-05-30 13:22:34] 2025-05-30 11:22:16,996 | INFO     |  -- lfn=log.44871837._099899.job.log.tgz.1, status_code=0, status=transferred
[2025-05-30 13:22:34] 2025-05-30 11:22:16,996 | INFO     | stage-out finished correctly
[2025-05-30 13:22:34] 2025-05-30 11:22:18,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-30 13:22:34] 2025-05-30 11:22:18,755 | INFO     | job 6670986451 has state=finished
[2025-05-30 13:22:34] 2025-05-30 11:22:18,755 | INFO     | preparing for final server update for job 6670986451 in state='finished'
[2025-05-30 13:22:34] 2025-05-30 11:22:18,756 | INFO     | this job has now completed (state=finished)
[2025-05-30 13:22:34] 2025-05-30 11:22:18,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-30 13:22:34] 2025-05-30 11:22:18,756 | INFO     | log transfer has been attempted: DONE
[2025-05-30 13:22:34] 2025-05-30 11:22:18,756 | INFO     | job 6670986451 has finished - writing final server update
[2025-05-30 13:22:34] 2025-05-30 11:22:18,756 | INFO     | total number of processed events: 400 (read)
[2025-05-30 13:22:34] 2025-05-30 11:22:18,758 | INFO     | executing command: lscpu
[2025-05-30 13:22:34] 2025-05-30 11:22:18,784 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 13:22:34] 2025-05-30 11:22:21,162 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 13:22:34] 2025-05-30 11:22:21,162 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6670986451/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 13:22:34] 2025-05-30 11:22:21,163 | INFO     | extracted standard info from prmon json
[2025-05-30 13:22:34] 2025-05-30 11:22:21,163 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 13:22:34] 2025-05-30 11:22:21,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 13:22:34] 2025-05-30 11:22:21,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 13:22:34] 2025-05-30 11:22:21,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 13:22:34] 2025-05-30 11:22:21,164 | INFO     | fitting pss+swap vs Time
[2025-05-30 13:22:34] 2025-05-30 11:22:21,164 | INFO     | sum of square deviations: 36465800.0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,164 | INFO     | sum of deviations: 719820374.0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,164 | INFO     | mean x: 1748602521.0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,164 | INFO     | mean y: 2928897.4897959186
[2025-05-30 13:22:34] 2025-05-30 11:22:21,164 | INFO     | -- intersect: -34513788702.1121
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | intersect: -34513788702.1121
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | chi2: 0.0007554785028481264
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | -- intersect: -34513788702.1121
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | current memory leak: 19.74 B/s (using 49 data points, chi2=0.00)
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | ..............................
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . Timing measurements:
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . get job = 0 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . initial setup = 2 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . payload setup = 3 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . stage-in = 0 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . payload execution = 3383 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . stage-out = 0 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | . log creation = 0 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,165 | INFO     | ..............................
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | 
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | job summary report
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | --------------------------------------------------
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | PanDA job id: 6670986451
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | task id: 44871837
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | errors: (none)
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | pilot state: finished 
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | transexitcode: 0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | exeerrorcode: 0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,219 | INFO     | exeerrordiag: 
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | exitcode: 0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | exitmsg: OK
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | cpuconsumptiontime: 36409 s
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | nevents: 400
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | neventsw: 0
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | pid: 229803
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | pgrp: 229803
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | corecount: 12
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | event service: False
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | sizes: {0: 2405133, 3: 2405339, 11: 2405367, 3390: 2431003, 3392: 2439944, 3393: 2440000, 3396: 2440298}
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | --------------------------------------------------
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | 
[2025-05-30 13:22:34] 2025-05-30 11:22:21,220 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-30 13:22:34] 2025-05-30 11:22:21,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | job 6670986451 has completed (purged errors)
[2025-05-30 13:22:34] 2025-05-30 11:22:21,236 | INFO     | overall cleanup function is called
[2025-05-30 13:22:34] 2025-05-30 11:22:21,308 | WARNING  | process 229803 can no longer be monitored (due to stat problems) - aborting
[2025-05-30 13:22:34] 2025-05-30 11:22:21,370 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 13:22:34] 2025-05-30 11:22:21,446 | INFO     | number of running child processes to parent process 229803: 1
[2025-05-30 13:22:34] 2025-05-30 11:22:21,446 | INFO     | maximum number of monitored processes: 6
[2025-05-30 13:22:34] 2025-05-30 11:22:21,446 | INFO     | aborting job monitoring since job object (job id=6670986451) has expired
[2025-05-30 13:22:34] 2025-05-30 11:22:22,244 | INFO     | --- collectZombieJob: --- 10, [229803]
[2025-05-30 13:22:34] 2025-05-30 11:22:22,244 | INFO     | zombie collector waiting for pid 229803
[2025-05-30 13:22:34] 2025-05-30 11:22:22,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 13:22:34] 2025-05-30 11:22:22,244 | INFO     | collected zombie processes
[2025-05-30 13:22:34] 2025-05-30 11:22:22,245 | INFO     | will attempt to kill all subprocesses of pid=229803
[2025-05-30 13:22:34] 2025-05-30 11:22:22,325 | INFO     | process IDs to be killed: [229803] (in reverse order)
[2025-05-30 13:22:34] 2025-05-30 11:22:22,363 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 13:22:34] 2025-05-30 11:22:22,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 13:22:34] 2025-05-30 11:22:22,366 | INFO     | did not find any defunct processes belonging to 229803
[2025-05-30 13:22:34] 2025-05-30 11:22:22,368 | INFO     | did not find any defunct processes belonging to 229803
[2025-05-30 13:22:34] 2025-05-30 11:22:22,368 | INFO     | ready for new job
[2025-05-30 13:22:34] 2025-05-30 11:22:22,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 13:22:34] 2025-05-30 11:22:22,369 | INFO     | **************************************
[2025-05-30 13:22:34] 2025-05-30 11:22:22,369 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 13:22:34] 2025-05-30 11:22:22,369 | INFO     | **************************************
[2025-05-30 13:22:34] 2025-05-30 11:22:22,369 | INFO     | 
[2025-05-30 13:22:34] 2025-05-30 11:22:22,371 | INFO     | architecture information:
[2025-05-30 13:22:34] 2025-05-30 11:22:22,371 | INFO     | executing command: cat /etc/os-release
[2025-05-30 13:22:34] 2025-05-30 11:22:22,382 | INFO     | cat /etc/os-release:
[2025-05-30 13:22:34] NAME="CentOS Linux"
[2025-05-30 13:22:34] VERSION="7 (Core)"
[2025-05-30 13:22:34] ID="centos"
[2025-05-30 13:22:34] ID_LIKE="rhel fedora"
[2025-05-30 13:22:34] VERSION_ID="7"
[2025-05-30 13:22:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 13:22:34] ANSI_COLOR="0;31"
[2025-05-30 13:22:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 13:22:34] HOME_URL="https://www.centos.org/"
[2025-05-30 13:22:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 13:22:34] 
[2025-05-30 13:22:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 13:22:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 13:22:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 13:22:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 13:22:34] 
[2025-05-30 13:22:34] 2025-05-30 11:22:22,382 | INFO     | **************************************
[2025-05-30 13:22:34] 2025-05-30 11:22:22,885 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-30 13:22:34] 2025-05-30 11:22:22,896 | INFO     | sufficient remaining disk space (68204625920 B)
[2025-05-30 13:22:34] 2025-05-30 11:22:22,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 13:22:34] 2025-05-30 11:22:22,896 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 13:22:34] 2025-05-30 11:22:22,896 | INFO     | update_server=False
[2025-05-30 13:22:34] 2025-05-30 11:22:22,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 13:22:34] 2025-05-30 11:22:22,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 13:22:34] 2025-05-30 11:22:22,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:22:34] 2025-05-30 11:22:22,897 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 13:22:34] 2025-05-30 11:22:22,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:22:34] 2025-05-30 11:22:22,897 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 13:22:34] 2025-05-30 11:22:22,898 | INFO     | aborting loop
[2025-05-30 13:22:34] 2025-05-30 11:22:22,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 13:22:34] 2025-05-30 11:22:22,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 13:22:34] 2025-05-30 11:22:23,229 | INFO     | all data control threads have been joined
[2025-05-30 13:22:34] 2025-05-30 11:22:23,574 | INFO     | all payload control threads have been joined
[2025-05-30 13:22:34] 2025-05-30 11:22:23,716 | INFO     | all job control threads have been joined
[2025-05-30 13:22:34] 2025-05-30 11:22:23,901 | INFO     | [job] retrieve thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:23,902 | INFO     | [job] queue monitor thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:23,903 | INFO     | [job] job monitor thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:23,905 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,038 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,234 | INFO     | [data] control thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 13:22:34] 2025-05-30 11:22:24,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,450 | INFO     | [payload] validate_post thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,580 | INFO     | [payload] control thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,721 | INFO     | [job] control thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:24,902 | INFO     | [data] copytool_out thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:25,150 | INFO     | [data] copytool_in thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:25,259 | INFO     | [payload] failed_post thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:25,268 | INFO     | [job] validate thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:25,396 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:28,324 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 13:22:34] 2025-05-30 11:22:29,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933527766848)>', '<ExcThread(monitor, started 139933020829440)>']
[2025-05-30 13:22:34] 2025-05-30 11:22:29,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 13:22:34] 2025-05-30 11:22:29,933 | INFO     | [monitor] control thread has ended
[2025-05-30 13:22:34] 2025-05-30 11:22:34,437 | INFO     | all workflow threads have been joined
[2025-05-30 13:22:34] 2025-05-30 11:22:34,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 13:22:34] 2025-05-30 11:22:34,441 | INFO     | traces error code: 0
[2025-05-30 13:22:34] 2025-05-30 11:22:34,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 13:22:34] 2025-05-30 11:22:34,502 [wrapper] ==== pilot stdout END ====
[2025-05-30 13:22:34] 2025-05-30 11:22:34,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 13:22:34] 2025-05-30 11:22:34,506 [wrapper] pilotpid: 223069
[2025-05-30 13:22:34] 2025-05-30 11:22:34,508 [wrapper] Pilot exit status: 0
[2025-05-30 13:22:34] 2025-05-30 11:22:34,514 [wrapper] pandaids: 6670986451
[2025-05-30 13:22:34] 2025-05-30 11:22:34,538 [wrapper] cleanup supervisor_pilot  281428 223070
[2025-05-30 13:22:34] 2025-05-30 11:22:34,540 [wrapper] Test setup, not cleaning
[2025-05-30 13:22:34] 2025-05-30 11:22:34,542 [wrapper] apfmon messages muted
[2025-05-30 13:22:34] 2025-05-30 11:22:34,543 [wrapper] ==== wrapper stdout END ====
[2025-05-30 13:22:34] 2025-05-30 11:22:34,545 [wrapper] ==== wrapper stderr END ====
[2025-05-30 13:22:34]  *** Error codes and diagnostics ***
[2025-05-30 13:22:34]     "exeErrorCode": 0,
[2025-05-30 13:22:34]     "exeErrorDiag": "",
[2025-05-30 13:22:34]     "pilotErrorCode": 0,
[2025-05-30 13:22:34]     "pilotErrorDiag": "",
[2025-05-30 13:22:34]  *** Listing of results directory ***
[2025-05-30 13:22:34] total 425480
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc    495897 May 29 13:55 pilot3.tar.gz
[2025-05-30 13:22:34] -rwx------ 1 boinc boinc     37140 May 29 14:00 runpilot2-wrapper.sh
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc      5111 May 29 14:00 queuedata.json
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc       100 May 30 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 13:22:34] -rwxr-xr-x 1 boinc boinc      7986 May 30 12:25 run_atlas
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc       105 May 30 12:25 job.xml
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc      9446 May 30 12:25 init_data.xml
[2025-05-30 13:22:34] -rw-r--r-- 2 boinc boinc 225810164 May 30 12:25 EVNT.44871834._001687.pool.root.1
[2025-05-30 13:22:34] -rw-r--r-- 2 boinc boinc     15093 May 30 12:25 start_atlas.sh
[2025-05-30 13:22:34] drwxrwx--x 2 boinc boinc      4096 May 30 12:25 shared
[2025-05-30 13:22:34] -rw-r--r-- 2 boinc boinc    508877 May 30 12:25 input.tar.gz
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc         0 May 30 12:25 boinc_lockfile
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc      2558 May 30 12:25 pandaJob.out
[2025-05-30 13:22:34] -rw------- 1 boinc boinc    992136 May 30 12:25 agis_schedconf.cvmfs.json
[2025-05-30 13:22:34] -rw------- 1 boinc boinc   1603667 May 30 12:25 agis_ddmendpoints.agis.ALL.json
[2025-05-30 13:22:34] drwx------ 4 boinc boinc      4096 May 30 12:25 pilot3
[2025-05-30 13:22:34] -rw------- 1 boinc boinc 204631281 May 30 13:21 HITS.44871837._099899.pool.root.1
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc       529 May 30 13:21 boinc_task_state.xml
[2025-05-30 13:22:34] -rw------- 1 boinc boinc        95 May 30 13:22 pilot_heartbeat.json
[2025-05-30 13:22:34] -rw------- 1 boinc boinc      1012 May 30 13:22 memory_monitor_summary.json
[2025-05-30 13:22:34] -rw------- 1 boinc boinc    349828 May 30 13:22 log.44871837._099899.job.log.tgz.1
[2025-05-30 13:22:34] -rw------- 1 boinc boinc      7673 May 30 13:22 heartbeat.json
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc        27 May 30 13:22 wrapper_checkpoint.txt
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc      8192 May 30 13:22 boinc_mmap_file
[2025-05-30 13:22:34] -rw------- 1 boinc boinc      4476 May 30 13:22 pilotlog.txt
[2025-05-30 13:22:34] -rw------- 1 boinc boinc    352838 May 30 13:22 log.44871837._099899.job.log.1
[2025-05-30 13:22:34] -rw------- 1 boinc boinc       357 May 30 13:22 output.list
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc       620 May 30 13:22 runtime_log
[2025-05-30 13:22:34] -rw------- 1 boinc boinc    716800 May 30 13:22 result.tar.gz
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc      8696 May 30 13:22 runtime_log.err
[2025-05-30 13:22:34] -rw------- 1 boinc boinc       658 May 30 13:22 biYNDmD7qe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYAVKDmFdZUCo.diag
[2025-05-30 13:22:34] -rw-r--r-- 1 boinc boinc     21210 May 30 13:22 stderr.txt
[2025-05-30 13:22:34] HITS file was successfully produced:
[2025-05-30 13:22:34] -rw------- 1 boinc boinc 204631281 May 30 13:21 shared/HITS.pool.root.1
[2025-05-30 13:22:34]  *** Contents of shared directory: ***
[2025-05-30 13:22:34] total 421580
[2025-05-30 13:22:34] -rw-r--r-- 2 boinc boinc 225810164 May 30 12:25 ATLAS.root_0
[2025-05-30 13:22:34] -rw-r--r-- 2 boinc boinc     15093 May 30 12:25 start_atlas.sh
[2025-05-30 13:22:34] -rw-r--r-- 2 boinc boinc    508877 May 30 12:25 input.tar.gz
[2025-05-30 13:22:34] -rw------- 1 boinc boinc 204631281 May 30 13:21 HITS.pool.root.1
[2025-05-30 13:22:34] -rw------- 1 boinc boinc    716800 May 30 13:22 result.tar.gz
13:22:36 (219286): run_atlas exited; CPU time 36445.499753
13:22:36 (219286): called boinc_finish(0)

</stderr_txt>
]]>

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