Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:33 (28172): wrapper (7.7.26015): starting
06:24:33 (28172): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 06:24:33] Arguments: --nthreads 8
[2025-05-30 06:24:33] Threads: 8
[2025-05-30 06:24:33] Checking for CVMFS
[2025-05-30 06:24:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 06:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 06:24:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 06:24:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 06:24:37] 2.11.2.0 702 25706 82280 146587 2 114 19560741 25165825 4353 130560 0 15364567 99.824 15229796 1967 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 06:24:37] CVMFS is ok
[2025-05-30 06:24:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 06:24:37] Checking for apptainer binary...
[2025-05-30 06:24:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 06:24:37] Running /usr/bin/apptainer --version
[2025-05-30 06:24:37] apptainer version 1.3.2-1.el7
[2025-05-30 06:24:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 06:24:48] cg-vwn487.simple-grid.lan
[2025-05-30 06:24:48] apptainer works
[2025-05-30 06:24:48] Set ATHENA_PROC_NUMBER=8
[2025-05-30 06:24:48] Set ATHENA_CORE_NUMBER=8
[2025-05-30 06:24:48] Starting ATLAS job with PandaID=6670937980
[2025-05-30 06:24:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 11:22:51]  *** The last 200 lines of the pilot log: ***
[2025-05-30 11:22:51] 2025-05-30 09:12:51,924 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6670937980/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 11:22:51] 2025-05-30 09:12:51,924 | INFO     | extracted standard info from prmon json
[2025-05-30 11:22:51] 2025-05-30 09:12:51,924 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 11:22:51] 2025-05-30 09:12:51,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 11:22:51] 2025-05-30 09:12:51,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 11:22:51] 2025-05-30 09:12:51,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 11:22:51] 2025-05-30 09:12:51,930 | INFO     | fitting pss+swap vs Time
[2025-05-30 11:22:51] 2025-05-30 09:12:51,931 | INFO     | sum of square deviations: 6880054580.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,933 | INFO     | sum of deviations: -58086944756.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,933 | INFO     | mean x: 1748587721.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,933 | INFO     | mean y: 2524133.5017793593
[2025-05-30 11:22:51] 2025-05-30 09:12:51,950 | INFO     | -- intersect: 14765505614.20203
[2025-05-30 11:22:51] 2025-05-30 09:12:51,950 | INFO     | intersect: 14765505614.20203
[2025-05-30 11:22:51] 2025-05-30 09:12:51,950 | INFO     | chi2: 2.541707878124846
[2025-05-30 11:22:51] 2025-05-30 09:12:51,951 | INFO     | sum of square deviations: 6519285025.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,953 | INFO     | sum of deviations: -38260631121.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,953 | INFO     | mean x: 1748587568.5
[2025-05-30 11:22:51] 2025-05-30 09:12:51,953 | INFO     | mean y: 2532401.0507246377
[2025-05-30 11:22:51] 2025-05-30 09:12:51,953 | INFO     | -- intersect: 10264710490.302898
[2025-05-30 11:22:51] 2025-05-30 09:12:51,954 | INFO     | intersect: 10264710490.302898
[2025-05-30 11:22:51] 2025-05-30 09:12:51,954 | INFO     | chi2: 1.7708162464696184
[2025-05-30 11:22:51] 2025-05-30 09:12:51,954 | INFO     | current chi2=1.7708162464696184 (change=30.329670781205415 %)
[2025-05-30 11:22:51] 2025-05-30 09:12:51,955 | INFO     | sum of square deviations: 6171352920.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,957 | INFO     | sum of deviations: -37257591101.999985
[2025-05-30 11:22:51] 2025-05-30 09:12:51,957 | INFO     | mean x: 1748587416.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,957 | INFO     | mean y: 2532840.734317343
[2025-05-30 11:22:51] 2025-05-30 09:12:51,957 | INFO     | -- intersect: 10559076243.121803
[2025-05-30 11:22:51] 2025-05-30 09:12:51,957 | INFO     | intersect: 10559076243.121803
[2025-05-30 11:22:51] 2025-05-30 09:12:51,958 | INFO     | chi2: 1.7691323358736732
[2025-05-30 11:22:51] 2025-05-30 09:12:51,958 | INFO     | current chi2=1.7691323358736732 (change=0.09509233943964063 %)
[2025-05-30 11:22:51] 2025-05-30 09:12:51,958 | INFO     | right removable region: 270
[2025-05-30 11:22:51] 2025-05-30 09:12:51,958 | INFO     | sum of square deviations: 6519285025.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,960 | INFO     | sum of deviations: -101355626314.50003
[2025-05-30 11:22:51] 2025-05-30 09:12:51,967 | INFO     | mean x: 1748587873.5
[2025-05-30 11:22:51] 2025-05-30 09:12:51,967 | INFO     | mean y: 2542272.7210144927
[2025-05-30 11:22:51] 2025-05-30 09:12:51,967 | INFO     | -- intersect: 27187918952.04978
[2025-05-30 11:22:51] 2025-05-30 09:12:51,967 | INFO     | intersect: 27187918952.04978
[2025-05-30 11:22:51] 2025-05-30 09:12:51,967 | INFO     | chi2: 1.0577819031729
[2025-05-30 11:22:51] 2025-05-30 09:12:51,967 | INFO     | current chi2=1.0577819031729 (change=58.38302614251318 %)
[2025-05-30 11:22:51] 2025-05-30 09:12:51,968 | INFO     | sum of square deviations: 6171352920.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,970 | INFO     | sum of deviations: -97102020400.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,970 | INFO     | mean x: 1748588026.0
[2025-05-30 11:22:51] 2025-05-30 09:12:51,970 | INFO     | mean y: 2540391.143911439
[2025-05-30 11:22:51] 2025-05-30 09:12:51,970 | INFO     | -- intersect: 27515377912.004368
[2025-05-30 11:22:51] 2025-05-30 09:12:51,971 | INFO     | intersect: 27515377912.004368
[2025-05-30 11:22:51] 2025-05-30 09:12:51,971 | INFO     | chi2: 1.0483992756751757
[2025-05-30 11:22:51] 2025-05-30 09:12:51,971 | INFO     | current chi2=1.0483992756751757 (change=0.8870096443870441 %)
[2025-05-30 11:22:51] 2025-05-30 09:12:51,971 | INFO     | left removable region: 20
[2025-05-30 11:22:51] 2025-05-30 09:12:51,971 | INFO     | sum of square deviations: 4844974562.5
[2025-05-30 11:22:51] 2025-05-30 09:12:51,973 | INFO     | sum of deviations: -60078847539.99999
[2025-05-30 11:22:51] 2025-05-30 09:12:51,973 | INFO     | mean x: 1748587995.5
[2025-05-30 11:22:51] 2025-05-30 09:12:51,974 | INFO     | mean y: 2542517.8
[2025-05-30 11:22:51] 2025-05-30 09:12:51,974 | INFO     | -- intersect: 21685453384.872005
[2025-05-30 11:22:51] 2025-05-30 09:12:51,974 | INFO     | intersect: 21685453384.872005
[2025-05-30 11:22:51] 2025-05-30 09:12:51,974 | INFO     | chi2: 0.24155921257055
[2025-05-30 11:22:51] 2025-05-30 09:12:51,974 | INFO     | -- intersect: 21685453384.872005
[2025-05-30 11:22:51] 2025-05-30 09:12:51,974 | INFO     | current memory leak: -12.40 B/s (using 250 data points, chi2=0.24)
[2025-05-30 11:22:51] 2025-05-30 09:12:51,975 | INFO     | ..............................
[2025-05-30 11:22:51] 2025-05-30 09:12:51,975 | INFO     | . Timing measurements:
[2025-05-30 11:22:51] 2025-05-30 09:12:51,975 | INFO     | . get job = 0 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,975 | INFO     | . initial setup = 7 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,976 | INFO     | . payload setup = 15 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,976 | INFO     | . stage-in = 0 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,976 | INFO     | . payload execution = 17109 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,976 | INFO     | . stage-out = 12 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,976 | INFO     | . log creation = 1 s
[2025-05-30 11:22:51] 2025-05-30 09:12:51,976 | INFO     | ..............................
[2025-05-30 11:22:51] 2025-05-30 09:12:52,126 | INFO     | 
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | job summary report
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | --------------------------------------------------
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | PanDA job id: 6670937980
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | task id: 44871837
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | errors: (none)
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | pilot state: finished 
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | transexitcode: 0
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | exeerrorcode: 0
[2025-05-30 11:22:51] 2025-05-30 09:12:52,127 | INFO     | exeerrordiag: 
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | exitcode: 0
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | exitmsg: OK
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | cpuconsumptiontime: 66387 s
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | nevents: 400
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | neventsw: 0
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | pid: 8103
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | pgrp: 8103
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | corecount: 8
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | event service: False
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | sizes: {0: 2404955, 1: 2405210, 2: 2405210, 7: 2405444, 12: 2405472, 17129: 2436641, 17142: 2445582, 17145: 2445638, 17236: 2445808}
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | --------------------------------------------------
[2025-05-30 11:22:51] 2025-05-30 09:12:52,128 | INFO     | 
[2025-05-30 11:22:51] 2025-05-30 09:12:52,129 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-30 11:22:51] 2025-05-30 09:12:52,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | job 6670937980 has completed (purged errors)
[2025-05-30 11:22:51] 2025-05-30 09:12:52,707 | INFO     | overall cleanup function is called
[2025-05-30 11:22:51] 2025-05-30 09:12:53,716 | INFO     | --- collectZombieJob: --- 10, [8103]
[2025-05-30 11:22:51] 2025-05-30 09:12:53,717 | INFO     | zombie collector waiting for pid 8103
[2025-05-30 11:22:51] 2025-05-30 09:12:53,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 11:22:51] 2025-05-30 09:12:53,717 | INFO     | collected zombie processes
[2025-05-30 11:22:51] 2025-05-30 09:12:53,717 | INFO     | will attempt to kill all subprocesses of pid=8103
[2025-05-30 11:22:51] 2025-05-30 09:12:53,840 | INFO     | process IDs to be killed: [8103] (in reverse order)
[2025-05-30 11:22:51] 2025-05-30 09:12:54,561 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 11:22:51] 2025-05-30 09:12:54,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 11:22:51] 2025-05-30 09:12:54,564 | INFO     | did not find any defunct processes belonging to 8103
[2025-05-30 11:22:51] 2025-05-30 09:12:54,568 | INFO     | did not find any defunct processes belonging to 8103
[2025-05-30 11:22:51] 2025-05-30 09:12:54,568 | INFO     | ready for new job
[2025-05-30 11:22:51] 2025-05-30 09:12:54,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 11:22:51] 2025-05-30 09:12:54,570 | INFO     | **************************************
[2025-05-30 11:22:51] 2025-05-30 09:12:54,571 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 11:22:51] 2025-05-30 09:12:54,571 | INFO     | **************************************
[2025-05-30 11:22:51] 2025-05-30 09:12:54,571 | INFO     | 
[2025-05-30 11:22:51] 2025-05-30 09:12:54,571 | INFO     | pilot is running in a VM
[2025-05-30 11:22:51] 2025-05-30 09:12:54,572 | INFO     | architecture information:
[2025-05-30 11:22:51] 2025-05-30 09:12:54,572 | INFO     | executing command: cat /etc/os-release
[2025-05-30 11:22:51] 2025-05-30 09:12:54,701 | INFO     | cat /etc/os-release:
[2025-05-30 11:22:51] NAME="CentOS Linux"
[2025-05-30 11:22:51] VERSION="7 (Core)"
[2025-05-30 11:22:51] ID="centos"
[2025-05-30 11:22:51] ID_LIKE="rhel fedora"
[2025-05-30 11:22:51] VERSION_ID="7"
[2025-05-30 11:22:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 11:22:51] ANSI_COLOR="0;31"
[2025-05-30 11:22:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 11:22:51] HOME_URL="https://www.centos.org/"
[2025-05-30 11:22:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 11:22:51] 
[2025-05-30 11:22:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 11:22:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 11:22:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 11:22:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 11:22:51] 
[2025-05-30 11:22:51] 2025-05-30 09:12:54,701 | INFO     | **************************************
[2025-05-30 11:22:51] 2025-05-30 09:12:55,205 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-30 11:22:51] 2025-05-30 09:12:55,364 | INFO     | sufficient remaining disk space (496089694208 B)
[2025-05-30 11:22:51] 2025-05-30 09:12:55,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 11:22:51] 2025-05-30 09:12:55,365 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 11:22:51] 2025-05-30 09:12:55,365 | INFO     | update_server=False
[2025-05-30 11:22:51] 2025-05-30 09:12:55,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 11:22:51] 2025-05-30 09:12:55,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 11:22:51] 2025-05-30 09:12:55,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 11:22:51] 2025-05-30 09:12:55,591 | INFO     | aborting loop
[2025-05-30 11:22:51] 2025-05-30 09:12:56,099 | INFO     | all payload control threads have been joined
[2025-05-30 11:22:51] 2025-05-30 09:12:56,153 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 11:22:51] 2025-05-30 09:12:56,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 11:22:51] 2025-05-30 09:12:56,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 11:22:51] 2025-05-30 09:12:56,341 | INFO     | all job control threads have been joined
[2025-05-30 11:22:51] 2025-05-30 09:12:56,371 | INFO     | [job] retrieve thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:56,421 | INFO     | all data control threads have been joined
[2025-05-30 11:22:51] 2025-05-30 09:12:56,425 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:56,597 | INFO     | [job] job monitor thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:56,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,106 | INFO     | [payload] control thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,119 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,128 | INFO     | [job] validate thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 11:22:51] 2025-05-30 09:12:57,348 | INFO     | [job] control thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,351 | INFO     | [payload] failed_post thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,374 | INFO     | [data] copytool_out thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,428 | INFO     | [data] control thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,615 | INFO     | [payload] validate_post thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,705 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,733 | INFO     | [data] copytool_in thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:12:57,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 11:22:51] 2025-05-30 09:12:58,146 | INFO     | [job] queue monitor thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:13:01,982 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 11:22:51] 2025-05-30 09:13:02,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278572087104)>', '<ExcThread(monitor, started 140278353581824)>']
[2025-05-30 11:22:51] 2025-05-30 09:13:03,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 11:22:51] 2025-05-30 09:13:03,195 | INFO     | [monitor] control thread has ended
[2025-05-30 11:22:51] 2025-05-30 09:13:07,895 | INFO     | all workflow threads have been joined
[2025-05-30 11:22:51] 2025-05-30 09:13:07,896 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 11:22:51] 2025-05-30 09:13:07,896 | INFO     | traces error code: 0
[2025-05-30 11:22:51] 2025-05-30 09:13:07,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 11:22:51] 2025-05-30 09:13:08,255 [wrapper] ==== pilot stdout END ====
[2025-05-30 11:22:51] 2025-05-30 09:13:08,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 11:22:51] 2025-05-30 09:13:08,336 [wrapper] pilotpid: 31915
[2025-05-30 11:22:51] 2025-05-30 09:13:08,383 [wrapper] Pilot exit status: 0
[2025-05-30 11:22:51] 2025-05-30 09:13:08,896 [wrapper] pandaids: 6670937980
[2025-05-30 11:22:51] 2025-05-30 09:13:09,495 [wrapper] cleanup supervisor_pilot 15752 31916
[2025-05-30 11:22:51] 2025-05-30 09:13:09,531 [wrapper] Test setup, not cleaning
[2025-05-30 11:22:51] 2025-05-30 09:13:09,567 [wrapper] apfmon messages muted
[2025-05-30 11:22:51] 2025-05-30 09:13:09,612 [wrapper] ==== wrapper stdout END ====
[2025-05-30 11:22:51] 2025-05-30 09:13:09,660 [wrapper] ==== wrapper stderr END ====
[2025-05-30 11:22:51]  *** Error codes and diagnostics ***
[2025-05-30 11:22:51]     "exeErrorCode": 0,
[2025-05-30 11:22:51]     "exeErrorDiag": "",
[2025-05-30 11:22:51]     "pilotErrorCode": 0,
[2025-05-30 11:22:51]     "pilotErrorDiag": "",
[2025-05-30 11:22:51]  *** Listing of results directory ***
[2025-05-30 11:22:51] total 427372
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc    495897 May 29 13:24 pilot3.tar.gz
[2025-05-30 11:22:51] -rwx------. 1 boinc boinc     37140 May 29 13:37 runpilot2-wrapper.sh
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc      5111 May 29 13:37 queuedata.json
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc       100 May 30 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 11:22:51] -rwxr-xr-x. 1 boinc boinc      7986 May 30 06:24 run_atlas
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc       105 May 30 06:24 job.xml
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc      6371 May 30 06:24 init_data.xml
[2025-05-30 11:22:51] -rw-r--r--. 2 boinc boinc 227855884 May 30 06:24 EVNT.44871834._001277.pool.root.1
[2025-05-30 11:22:51] -rw-r--r--. 2 boinc boinc     15093 May 30 06:24 start_atlas.sh
[2025-05-30 11:22:51] drwxrwx--x. 2 boinc boinc        68 May 30 06:24 shared
[2025-05-30 11:22:51] -rw-r--r--. 2 boinc boinc    508876 May 30 06:24 input.tar.gz
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc         0 May 30 06:24 boinc_lockfile
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc      2558 May 30 06:24 pandaJob.out
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc    992366 May 30 06:25 agis_schedconf.cvmfs.json
[2025-05-30 11:22:51] drwx------. 4 boinc boinc      4096 May 30 06:25 pilot3
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc 202190878 May 30 11:09 HITS.44871837._099585.pool.root.1
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc       531 May 30 11:10 boinc_task_state.xml
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc      1016 May 30 11:11 memory_monitor_summary.json
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc   1603667 May 30 11:11 agis_ddmendpoints.agis.ALL.json
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc    398599 May 30 11:11 log.44871837._099585.job.log.tgz.1
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc        95 May 30 11:11 pilot_heartbeat.json
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc      7688 May 30 11:12 heartbeat.json
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc      4416 May 30 11:13 pilotlog.txt
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc   1480220 May 30 11:13 log.44871837._099585.job.log.1
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc       357 May 30 11:13 output.list
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc       620 May 30 11:13 runtime_log
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc   1894400 May 30 11:13 result.tar.gz
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc       657 May 30 11:13 ZsENDmBlqe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9TeKDmFxv7Fm.diag
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc      8659 May 30 11:13 runtime_log.err
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc      8192 May 30 11:22 boinc_mmap_file
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc        28 May 30 11:22 wrapper_checkpoint.txt
[2025-05-30 11:22:51] -rw-r--r--. 1 boinc boinc     20476 May 30 11:22 stderr.txt
[2025-05-30 11:22:51] HITS file was successfully produced:
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc 202190878 May 30 11:09 shared/HITS.pool.root.1
[2025-05-30 11:22:51]  *** Contents of shared directory: ***
[2025-05-30 11:22:51] total 422340
[2025-05-30 11:22:51] -rw-r--r--. 2 boinc boinc 227855884 May 30 06:24 ATLAS.root_0
[2025-05-30 11:22:51] -rw-r--r--. 2 boinc boinc     15093 May 30 06:24 start_atlas.sh
[2025-05-30 11:22:51] -rw-r--r--. 2 boinc boinc    508876 May 30 06:24 input.tar.gz
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc 202190878 May 30 11:09 HITS.pool.root.1
[2025-05-30 11:22:51] -rw-------. 1 boinc boinc   1894400 May 30 11:13 result.tar.gz
11:22:53 (28172): run_atlas exited; CPU time 66593.981120
11:22:53 (28172): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN