Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:39 (13075): wrapper (7.7.26015): starting
06:40:39 (13075): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 06:40:39] Arguments: --nthreads 8
[2025-05-30 06:40:39] Threads: 8
[2025-05-30 06:40:39] Checking for CVMFS
[2025-05-30 06:40:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 06:40:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 06:40:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 06:40:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 06:40:41] 2.11.2.0 26867 25540 91964 146587 3 59 18416090 25165825 4632 130560 0 13989801 99.831 14648615 1755 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 06:40:41] CVMFS is ok
[2025-05-30 06:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 06:40:41] Checking for apptainer binary...
[2025-05-30 06:40:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 06:40:41] Running /usr/bin/apptainer --version
[2025-05-30 06:40:42] apptainer version 1.3.2-1.el7
[2025-05-30 06:40:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 06:40:49] cg-vwn435.simple-grid.lan
[2025-05-30 06:40:49] apptainer works
[2025-05-30 06:40:49] Set ATHENA_PROC_NUMBER=8
[2025-05-30 06:40:49] Set ATHENA_CORE_NUMBER=8
[2025-05-30 06:40:49] Starting ATLAS job with PandaID=6669443655
[2025-05-30 06:40:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 12:07:53]  *** The last 200 lines of the pilot log: ***
[2025-05-30 12:07:53] 2025-05-30 10:07:32,239 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 12:07:53] 2025-05-30 10:07:32,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 12:07:53] 2025-05-30 10:07:32,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 12:07:53] 2025-05-30 10:07:32,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 12:07:53] 2025-05-30 10:07:32,246 | INFO     | fitting pss+swap vs Time
[2025-05-30 12:07:53] 2025-05-30 10:07:32,247 | INFO     | sum of square deviations: 9237596457.5
[2025-05-30 12:07:53] 2025-05-30 10:07:32,250 | INFO     | sum of deviations: 116859499591.50002
[2025-05-30 12:07:53] 2025-05-30 10:07:32,251 | INFO     | mean x: 1748590192.5
[2025-05-30 12:07:53] 2025-05-30 10:07:32,251 | INFO     | mean y: 2465168.8032258064
[2025-05-30 12:07:53] 2025-05-30 10:07:32,251 | INFO     | -- intersect: -22117939833.328217
[2025-05-30 12:07:53] 2025-05-30 10:07:32,251 | INFO     | intersect: -22117939833.328217
[2025-05-30 12:07:53] 2025-05-30 10:07:32,251 | INFO     | chi2: 7.245874949334654
[2025-05-30 12:07:53] 2025-05-30 10:07:32,252 | INFO     | sum of square deviations: 8797783560.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,255 | INFO     | sum of deviations: 135520519216.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,255 | INFO     | mean x: 1748590040.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,255 | INFO     | mean y: 2471545.4918032787
[2025-05-30 12:07:53] 2025-05-30 10:07:32,255 | INFO     | -- intersect: -26932702353.77678
[2025-05-30 12:07:53] 2025-05-30 10:07:32,256 | INFO     | intersect: -26932702353.77678
[2025-05-30 12:07:53] 2025-05-30 10:07:32,256 | INFO     | chi2: 6.5227842291365645
[2025-05-30 12:07:53] 2025-05-30 10:07:32,256 | INFO     | current chi2=6.5227842291365645 (change=9.979343078015537 %)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,256 | INFO     | right removable region: 304
[2025-05-30 12:07:53] 2025-05-30 10:07:32,257 | INFO     | sum of square deviations: 8797783560.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,260 | INFO     | sum of deviations: 7411092276.000046
[2025-05-30 12:07:53] 2025-05-30 10:07:32,260 | INFO     | mean x: 1748590345.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,260 | INFO     | mean y: 2503097.7377049183
[2025-05-30 12:07:53] 2025-05-30 10:07:32,261 | INFO     | -- intersect: -1470477490.0818202
[2025-05-30 12:07:53] 2025-05-30 10:07:32,261 | INFO     | intersect: -1470477490.0818202
[2025-05-30 12:07:53] 2025-05-30 10:07:32,261 | INFO     | chi2: 2.413820817531685
[2025-05-30 12:07:53] 2025-05-30 10:07:32,261 | INFO     | current chi2=2.413820817531685 (change=66.68696555750896 %)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,262 | INFO     | sum of square deviations: 8372156975.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,265 | INFO     | sum of deviations: -47416468973.5
[2025-05-30 12:07:53] 2025-05-30 10:07:32,265 | INFO     | mean x: 1748590497.5
[2025-05-30 12:07:53] 2025-05-30 10:07:32,265 | INFO     | mean y: 2522651.0833333335
[2025-05-30 12:07:53] 2025-05-30 10:07:32,265 | INFO     | -- intersect: 9905823236.541561
[2025-05-30 12:07:53] 2025-05-30 10:07:32,265 | INFO     | intersect: 9905823236.541561
[2025-05-30 12:07:53] 2025-05-30 10:07:32,266 | INFO     | chi2: 0.9546033600781658
[2025-05-30 12:07:53] 2025-05-30 10:07:32,266 | INFO     | current chi2=0.9546033600781658 (change=60.45260057644543 %)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,266 | INFO     | sum of square deviations: 7960484140.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,269 | INFO     | sum of deviations: -45040289582.999985
[2025-05-30 12:07:53] 2025-05-30 10:07:32,269 | INFO     | mean x: 1748590650.0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,270 | INFO     | mean y: 2521747.2237288137
[2025-05-30 12:07:53] 2025-05-30 10:07:32,270 | INFO     | -- intersect: 9896019159.320345
[2025-05-30 12:07:53] 2025-05-30 10:07:32,270 | INFO     | intersect: 9896019159.320345
[2025-05-30 12:07:53] 2025-05-30 10:07:32,270 | INFO     | chi2: 0.9346913162639952
[2025-05-30 12:07:53] 2025-05-30 10:07:32,270 | INFO     | current chi2=0.9346913162639952 (change=2.085897101026358 %)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,270 | INFO     | left removable region: 30
[2025-05-30 12:07:53] 2025-05-30 10:07:32,271 | INFO     | sum of square deviations: 6378584712.5
[2025-05-30 12:07:53] 2025-05-30 10:07:32,273 | INFO     | sum of deviations: 6143946504.499994
[2025-05-30 12:07:53] 2025-05-30 10:07:32,274 | INFO     | mean x: 1748590924.5
[2025-05-30 12:07:53] 2025-05-30 10:07:32,274 | INFO     | mean y: 2516675.594890511
[2025-05-30 12:07:53] 2025-05-30 10:07:32,274 | INFO     | -- intersect: -1681751791.8801644
[2025-05-30 12:07:53] 2025-05-30 10:07:32,274 | INFO     | intersect: -1681751791.8801644
[2025-05-30 12:07:53] 2025-05-30 10:07:32,274 | INFO     | chi2: 0.026724180511070127
[2025-05-30 12:07:53] 2025-05-30 10:07:32,275 | INFO     | -- intersect: -1681751791.8801644
[2025-05-30 12:07:53] 2025-05-30 10:07:32,275 | INFO     | current memory leak: 0.96 B/s (using 274 data points, chi2=0.03)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | ..............................
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . Timing measurements:
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . get job = 0 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . initial setup = 10 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . payload setup = 164 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . stage-in = 0 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . payload execution = 19016 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,276 | INFO     | . stage-out = 1 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,277 | INFO     | . log creation = 0 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,277 | INFO     | ..............................
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | 
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | job summary report
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | --------------------------------------------------
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | PanDA job id: 6669443655
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | task id: 44871837
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | errors: (none)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | pilot state: finished 
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | transexitcode: 0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | exeerrorcode: 0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | exeerrordiag: 
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | exitcode: 0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | exitmsg: OK
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | cpuconsumptiontime: 71914 s
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | nevents: 400
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | neventsw: 0
[2025-05-30 12:07:53] 2025-05-30 10:07:32,519 | INFO     | pid: 23429
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | pgrp: 23429
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | corecount: 8
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | event service: False
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | sizes: {0: 2404405, 1: 2405090, 2: 2405289, 13: 2405289, 23: 2405345, 34: 2405373, 45: 2405529, 56: 2405557, 66: 2405585, 77: 2405613, 88: 2405669, 93: 2406183, 99
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | --------------------------------------------------
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | 
[2025-05-30 12:07:53] 2025-05-30 10:07:32,520 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-30 12:07:53] 2025-05-30 10:07:32,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 12:07:53] 2025-05-30 10:07:32,566 | INFO     | job 6669443655 has completed (purged errors)
[2025-05-30 12:07:53] 2025-05-30 10:07:32,567 | INFO     | overall cleanup function is called
[2025-05-30 12:07:53] 2025-05-30 10:07:33,576 | INFO     | --- collectZombieJob: --- 10, [23429]
[2025-05-30 12:07:53] 2025-05-30 10:07:33,577 | INFO     | zombie collector waiting for pid 23429
[2025-05-30 12:07:53] 2025-05-30 10:07:33,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 12:07:53] 2025-05-30 10:07:33,577 | INFO     | collected zombie processes
[2025-05-30 12:07:53] 2025-05-30 10:07:33,577 | INFO     | will attempt to kill all subprocesses of pid=23429
[2025-05-30 12:07:53] 2025-05-30 10:07:33,744 | INFO     | process IDs to be killed: [23429] (in reverse order)
[2025-05-30 12:07:53] 2025-05-30 10:07:33,839 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 12:07:53] 2025-05-30 10:07:33,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 12:07:53] 2025-05-30 10:07:33,842 | INFO     | did not find any defunct processes belonging to 23429
[2025-05-30 12:07:53] 2025-05-30 10:07:33,845 | INFO     | did not find any defunct processes belonging to 23429
[2025-05-30 12:07:53] 2025-05-30 10:07:33,845 | INFO     | ready for new job
[2025-05-30 12:07:53] 2025-05-30 10:07:33,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 12:07:53] 2025-05-30 10:07:33,847 | INFO     | **************************************
[2025-05-30 12:07:53] 2025-05-30 10:07:33,847 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 12:07:53] 2025-05-30 10:07:33,848 | INFO     | **************************************
[2025-05-30 12:07:53] 2025-05-30 10:07:33,848 | INFO     | 
[2025-05-30 12:07:53] 2025-05-30 10:07:33,848 | INFO     | pilot is running in a VM
[2025-05-30 12:07:53] 2025-05-30 10:07:33,848 | INFO     | architecture information:
[2025-05-30 12:07:53] 2025-05-30 10:07:33,854 | INFO     | executing command: cat /etc/os-release
[2025-05-30 12:07:53] 2025-05-30 10:07:33,908 | INFO     | cat /etc/os-release:
[2025-05-30 12:07:53] NAME="CentOS Linux"
[2025-05-30 12:07:53] VERSION="7 (Core)"
[2025-05-30 12:07:53] ID="centos"
[2025-05-30 12:07:53] ID_LIKE="rhel fedora"
[2025-05-30 12:07:53] VERSION_ID="7"
[2025-05-30 12:07:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 12:07:53] ANSI_COLOR="0;31"
[2025-05-30 12:07:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 12:07:53] HOME_URL="https://www.centos.org/"
[2025-05-30 12:07:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 12:07:53] 
[2025-05-30 12:07:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 12:07:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 12:07:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 12:07:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 12:07:53] 
[2025-05-30 12:07:53] 2025-05-30 10:07:33,908 | INFO     | **************************************
[2025-05-30 12:07:53] 2025-05-30 10:07:34,412 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-30 12:07:53] 2025-05-30 10:07:34,512 | INFO     | sufficient remaining disk space (496175677440 B)
[2025-05-30 12:07:53] 2025-05-30 10:07:34,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 12:07:53] 2025-05-30 10:07:34,512 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 12:07:53] 2025-05-30 10:07:34,512 | INFO     | update_server=False
[2025-05-30 12:07:53] 2025-05-30 10:07:34,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 12:07:53] 2025-05-30 10:07:34,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 12:07:53] 2025-05-30 10:07:34,513 | INFO     | aborting loop
[2025-05-30 12:07:53] 2025-05-30 10:07:34,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 12:07:53] 2025-05-30 10:07:34,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 12:07:53] 2025-05-30 10:07:34,515 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 12:07:53] 2025-05-30 10:07:34,516 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 12:07:53] 2025-05-30 10:07:34,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 12:07:53] 2025-05-30 10:07:34,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 12:07:53] 2025-05-30 10:07:34,812 | INFO     | all data control threads have been joined
[2025-05-30 12:07:53] 2025-05-30 10:07:35,230 | INFO     | all job control threads have been joined
[2025-05-30 12:07:53] 2025-05-30 10:07:35,439 | INFO     | all payload control threads have been joined
[2025-05-30 12:07:53] 2025-05-30 10:07:35,518 | INFO     | [job] retrieve thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:35,519 | INFO     | [job] job monitor thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:35,801 | INFO     | [payload] validate_post thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:35,818 | INFO     | [data] control thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,011 | INFO     | [job] validate thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,017 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,235 | INFO     | [job] control thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,305 | INFO     | [data] copytool_in thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,306 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,339 | INFO     | [payload] failed_post thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,445 | INFO     | [payload] control thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:36,521 | INFO     | [data] copytool_out thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:37,010 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:37,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 12:07:53] 2025-05-30 10:07:38,422 | INFO     | [job] queue monitor thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:38,522 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:45,482 | INFO     | job.realtimelogging is not enabled
[2025-05-30 12:07:53] 2025-05-30 10:07:46,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 12:07:53] 2025-05-30 10:07:47,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438057117504)>', '<ExcThread(monitor, started 140437243295488)>']
[2025-05-30 12:07:53] 2025-05-30 10:07:48,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 12:07:53] 2025-05-30 10:07:48,594 | INFO     | [monitor] control thread has ended
[2025-05-30 12:07:53] 2025-05-30 10:07:53,024 | INFO     | all workflow threads have been joined
[2025-05-30 12:07:53] 2025-05-30 10:07:53,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 12:07:53] 2025-05-30 10:07:53,025 | INFO     | traces error code: 0
[2025-05-30 12:07:53] 2025-05-30 10:07:53,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 12:07:53] 2025-05-30 10:07:53,208 [wrapper] ==== pilot stdout END ====
[2025-05-30 12:07:53] 2025-05-30 10:07:53,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 12:07:53] 2025-05-30 10:07:53,215 [wrapper] pilotpid: 16783
[2025-05-30 12:07:53] 2025-05-30 10:07:53,218 [wrapper] Pilot exit status: 0
[2025-05-30 12:07:53] 2025-05-30 10:07:53,240 [wrapper] pandaids: 6669443655
[2025-05-30 12:07:53] 2025-05-30 10:07:53,281 [wrapper] cleanup supervisor_pilot 17445 16784
[2025-05-30 12:07:53] 2025-05-30 10:07:53,294 [wrapper] Test setup, not cleaning
[2025-05-30 12:07:53] 2025-05-30 10:07:53,297 [wrapper] apfmon messages muted
[2025-05-30 12:07:53] 2025-05-30 10:07:53,303 [wrapper] ==== wrapper stdout END ====
[2025-05-30 12:07:53] 2025-05-30 10:07:53,309 [wrapper] ==== wrapper stderr END ====
[2025-05-30 12:07:53]  *** Error codes and diagnostics ***
[2025-05-30 12:07:53]     "exeErrorCode": 0,
[2025-05-30 12:07:53]     "exeErrorDiag": "",
[2025-05-30 12:07:53]     "pilotErrorCode": 0,
[2025-05-30 12:07:53]     "pilotErrorDiag": "",
[2025-05-30 12:07:53]  *** Listing of results directory ***
[2025-05-30 12:07:53] total 425800
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc      5111 May 29 09:00 queuedata.json
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc    495897 May 29 09:00 pilot3.tar.gz
[2025-05-30 12:07:53] -rwx------. 1 boinc boinc     37140 May 29 09:02 runpilot2-wrapper.sh
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc       100 May 30 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 12:07:53] -rwxr-xr-x. 1 boinc boinc      7986 May 30 06:40 run_atlas
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc       105 May 30 06:40 job.xml
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc      6371 May 30 06:40 init_data.xml
[2025-05-30 12:07:53] -rw-r--r--. 2 boinc boinc 223401875 May 30 06:40 EVNT.44871834._003804.pool.root.1
[2025-05-30 12:07:53] -rw-r--r--. 2 boinc boinc     15093 May 30 06:40 start_atlas.sh
[2025-05-30 12:07:53] drwxrwx--x. 2 boinc boinc        68 May 30 06:40 shared
[2025-05-30 12:07:53] -rw-r--r--. 2 boinc boinc    508872 May 30 06:40 input.tar.gz
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc         0 May 30 06:40 boinc_lockfile
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc      2558 May 30 06:40 pandaJob.out
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc    992366 May 30 06:44 agis_schedconf.cvmfs.json
[2025-05-30 12:07:53] drwx------. 4 boinc boinc      4096 May 30 06:44 pilot3
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc 204630168 May 30 12:06 HITS.44871837._096533.pool.root.1
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc       531 May 30 12:07 boinc_task_state.xml
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc        95 May 30 12:07 pilot_heartbeat.json
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc      1020 May 30 12:07 memory_monitor_summary.json
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc   1603667 May 30 12:07 agis_ddmendpoints.agis.ALL.json
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc    442250 May 30 12:07 log.44871837._096533.job.log.tgz.1
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc      7694 May 30 12:07 heartbeat.json
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc      8192 May 30 12:07 boinc_mmap_file
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc        28 May 30 12:07 wrapper_checkpoint.txt
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc      4611 May 30 12:07 pilotlog.txt
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc   1637358 May 30 12:07 log.44871837._096533.job.log.1
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc       357 May 30 12:07 output.list
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc       620 May 30 12:07 runtime_log
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc   2099200 May 30 12:07 result.tar.gz
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc       656 May 30 12:07 XmGKDmpSme7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm51dKDm9TdEUm.diag
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc      8659 May 30 12:07 runtime_log.err
[2025-05-30 12:07:53] -rw-r--r--. 1 boinc boinc     20515 May 30 12:07 stderr.txt
[2025-05-30 12:07:53] HITS file was successfully produced:
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc 204630168 May 30 12:06 shared/HITS.pool.root.1
[2025-05-30 12:07:53]  *** Contents of shared directory: ***
[2025-05-30 12:07:53] total 420572
[2025-05-30 12:07:53] -rw-r--r--. 2 boinc boinc 223401875 May 30 06:40 ATLAS.root_0
[2025-05-30 12:07:53] -rw-r--r--. 2 boinc boinc     15093 May 30 06:40 start_atlas.sh
[2025-05-30 12:07:53] -rw-r--r--. 2 boinc boinc    508872 May 30 06:40 input.tar.gz
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc 204630168 May 30 12:06 HITS.pool.root.1
[2025-05-30 12:07:53] -rw-------. 1 boinc boinc   2099200 May 30 12:07 result.tar.gz
12:07:55 (13075): run_atlas exited; CPU time 72187.550343
12:07:55 (13075): called boinc_finish(0)

</stderr_txt>
]]>

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