Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:54:30 (1309986): wrapper (7.7.26015): starting
00:54:30 (1309986): wrapper: running run_atlas (--nthreads 12)
[2025-05-31 00:54:30] Arguments: --nthreads 12
[2025-05-31 00:54:30] Threads: 12
[2025-05-31 00:54:30] Checking for CVMFS
[2025-05-31 00:54:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-31 00:54:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-31 00:54:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-31 00:54:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-31 00:54:33] 2.12.7.0 110200 9670 45192 146617 2 56 2334870 4096001 1824 130560 0 14736890 99.994 2339551 1085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-31 00:54:33] CVMFS is ok
[2025-05-31 00:54:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-31 00:54:33] Checking for apptainer binary...
[2025-05-31 00:54:33] apptainer is not installed, using version from CVMFS
[2025-05-31 00:54:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-31 00:54:39] ryzen4700s
[2025-05-31 00:54:39] apptainer works
[2025-05-31 00:54:40] Set ATHENA_PROC_NUMBER=12
[2025-05-31 00:54:40] Set ATHENA_CORE_NUMBER=12
[2025-05-31 00:54:40] Starting ATLAS job with PandaID=6670811325
[2025-05-31 00:54:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-31 03:30:51]  *** The last 200 lines of the pilot log: ***
[2025-05-31 03:30:51] 2025-05-31 03:30:34,613 | INFO     | extracted standard memory fields from prmon json
[2025-05-31 03:30:51] 2025-05-31 03:30:34,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-31 03:30:51] 2025-05-31 03:30:34,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-31 03:30:51] 2025-05-31 03:30:34,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-31 03:30:51] 2025-05-31 03:30:34,617 | INFO     | fitting pss+swap vs Time
[2025-05-31 03:30:51] 2025-05-31 03:30:34,617 | INFO     | sum of square deviations: 1110539892.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | sum of deviations: 1893812465.999998
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | mean x: 1748657576.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | mean y: 2621651.117647059
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | -- intersect: -2979377951.1029806
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | intersect: -2979377951.1029806
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | chi2: 3.076087377709381
[2025-05-31 03:30:51] 2025-05-31 03:30:34,618 | INFO     | sum of square deviations: 1005179777.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | sum of deviations: 22091568094.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | mean x: 1748657423.5
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | mean y: 2650278.689189189
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | -- intersect: -38428867573.39435
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | intersect: -38428867573.39435
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | chi2: 1.5265312258253958
[2025-05-31 03:30:51] 2025-05-31 03:30:34,619 | INFO     | current chi2=1.5265312258253958 (change=50.37425669741109 %)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,620 | INFO     | sum of square deviations: 906703512.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,620 | INFO     | sum of deviations: 21269508121.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,620 | INFO     | mean x: 1748657271.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,620 | INFO     | mean y: 2649005.1398601397
[2025-05-31 03:30:51] 2025-05-31 03:30:34,620 | INFO     | -- intersect: -41017463450.73888
[2025-05-31 03:30:51] 2025-05-31 03:30:34,620 | INFO     | intersect: -41017463450.73888
[2025-05-31 03:30:51] 2025-05-31 03:30:34,621 | INFO     | chi2: 1.5282798658784347
[2025-05-31 03:30:51] 2025-05-31 03:30:34,621 | INFO     | current chi2=1.5282798658784347 (change=-0.11454990395583847 %)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,621 | INFO     | right removable region: 142
[2025-05-31 03:30:51] 2025-05-31 03:30:34,621 | INFO     | sum of square deviations: 1005179777.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | sum of deviations: -24120779423.5
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | mean x: 1748657728.5
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | mean y: 2658815.1013513515
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | -- intersect: 41964294257.3025
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | intersect: 41964294257.3025
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | chi2: 1.6158721887496617
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | current chi2=1.6158721887496617 (change=47.46988656892684 %)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,622 | INFO     | sum of square deviations: 906703512.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,623 | INFO     | sum of deviations: -21852329205.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,623 | INFO     | mean x: 1748657881.0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,623 | INFO     | mean y: 2655286.5454545454
[2025-05-31 03:30:51] 2025-05-31 03:30:34,623 | INFO     | -- intersect: 42146804037.26709
[2025-05-31 03:30:51] 2025-05-31 03:30:34,623 | INFO     | intersect: 42146804037.26709
[2025-05-31 03:30:51] 2025-05-31 03:30:34,624 | INFO     | chi2: 1.6158404888212128
[2025-05-31 03:30:51] 2025-05-31 03:30:34,624 | INFO     | current chi2=1.6158404888212128 (change=0.0019617843954229095 %)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,624 | INFO     | left removable region: 20
[2025-05-31 03:30:51] 2025-05-31 03:30:34,624 | INFO     | sum of square deviations: 563026370.5
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | sum of deviations: 210104190.9999999
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | mean x: 1748657850.5
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | mean y: 2682359.4590163934
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | -- intersect: -649863173.5127847
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | intersect: -649863173.5127847
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | chi2: 0.003836841030324844
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | -- intersect: -649863173.5127847
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | current memory leak: 0.37 B/s (using 122 data points, chi2=0.00)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | ..............................
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | . Timing measurements:
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | . get job = 0 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | . initial setup = 3 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | . payload setup = 9 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | . stage-in = 0 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,625 | INFO     | . payload execution = 9280 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,626 | INFO     | . stage-out = 4 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,626 | INFO     | . log creation = 0 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,626 | INFO     | ..............................
[2025-05-31 03:30:51] 2025-05-31 03:30:34,674 | INFO     | 
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | job summary report
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | --------------------------------------------------
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | PanDA job id: 6670811325
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | task id: 44871837
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | errors: (none)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | pilot state: finished 
[2025-05-31 03:30:51] 2025-05-31 03:30:34,772 | INFO     | transexitcode: 0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | exeerrorcode: 0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | exeerrordiag: 
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | exitcode: 0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | exitmsg: OK
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | cpuconsumptiontime: 48010 s
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | nevents: 400
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | neventsw: 0
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | pid: 1320360
[2025-05-31 03:30:51] 2025-05-31 03:30:34,773 | INFO     | pgrp: 1320360
[2025-05-31 03:30:51] 2025-05-31 03:30:34,774 | INFO     | corecount: 12
[2025-05-31 03:30:51] 2025-05-31 03:30:34,774 | INFO     | event service: False
[2025-05-31 03:30:51] 2025-05-31 03:30:34,774 | INFO     | sizes: {0: 2405034, 1: 2405233, 4: 2405439, 11: 2405467, 9292: 2433713, 9299: 2442700, 9302: 2442884, 9307: 2443054}
[2025-05-31 03:30:51] 2025-05-31 03:30:34,774 | INFO     | --------------------------------------------------
[2025-05-31 03:30:51] 2025-05-31 03:30:34,774 | INFO     | 
[2025-05-31 03:30:51] 2025-05-31 03:30:34,774 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-05-31 03:30:51] 2025-05-31 03:30:34,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-31 03:30:51] 2025-05-31 03:30:34,804 | INFO     | job 6670811325 has completed (purged errors)
[2025-05-31 03:30:51] 2025-05-31 03:30:34,804 | INFO     | overall cleanup function is called
[2025-05-31 03:30:51] 2025-05-31 03:30:35,813 | INFO     | --- collectZombieJob: --- 10, [1320360]
[2025-05-31 03:30:51] 2025-05-31 03:30:35,814 | INFO     | zombie collector waiting for pid 1320360
[2025-05-31 03:30:51] 2025-05-31 03:30:35,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-31 03:30:51] 2025-05-31 03:30:35,814 | INFO     | collected zombie processes
[2025-05-31 03:30:51] 2025-05-31 03:30:35,814 | INFO     | will attempt to kill all subprocesses of pid=1320360
[2025-05-31 03:30:51] 2025-05-31 03:30:35,905 | INFO     | process IDs to be killed: [1320360] (in reverse order)
[2025-05-31 03:30:51] 2025-05-31 03:30:35,945 | WARNING  | found no corresponding commands to process id(s)
[2025-05-31 03:30:51] 2025-05-31 03:30:35,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-31 03:30:51] 2025-05-31 03:30:35,950 | INFO     | did not find any defunct processes belonging to 1320360
[2025-05-31 03:30:51] 2025-05-31 03:30:35,953 | INFO     | did not find any defunct processes belonging to 1320360
[2025-05-31 03:30:51] 2025-05-31 03:30:35,953 | INFO     | ready for new job
[2025-05-31 03:30:51] 2025-05-31 03:30:35,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-31 03:30:51] 2025-05-31 03:30:35,955 | INFO     | **************************************
[2025-05-31 03:30:51] 2025-05-31 03:30:35,955 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-31 03:30:51] 2025-05-31 03:30:35,955 | INFO     | **************************************
[2025-05-31 03:30:51] 2025-05-31 03:30:35,955 | INFO     | 
[2025-05-31 03:30:51] 2025-05-31 03:30:35,976 | INFO     | architecture information:
[2025-05-31 03:30:51] 2025-05-31 03:30:35,977 | INFO     | executing command: cat /etc/os-release
[2025-05-31 03:30:51] 2025-05-31 03:30:35,999 | INFO     | cat /etc/os-release:
[2025-05-31 03:30:51] NAME="CentOS Linux"
[2025-05-31 03:30:51] VERSION="7 (Core)"
[2025-05-31 03:30:51] ID="centos"
[2025-05-31 03:30:51] ID_LIKE="rhel fedora"
[2025-05-31 03:30:51] VERSION_ID="7"
[2025-05-31 03:30:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-31 03:30:51] ANSI_COLOR="0;31"
[2025-05-31 03:30:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-31 03:30:51] HOME_URL="https://www.centos.org/"
[2025-05-31 03:30:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-31 03:30:51] 
[2025-05-31 03:30:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-31 03:30:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-31 03:30:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-31 03:30:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-31 03:30:51] 
[2025-05-31 03:30:51] 2025-05-31 03:30:35,999 | INFO     | **************************************
[2025-05-31 03:30:51] 2025-05-31 03:30:36,503 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-05-31 03:30:51] 2025-05-31 03:30:36,522 | INFO     | sufficient remaining disk space (121556172800 B)
[2025-05-31 03:30:51] 2025-05-31 03:30:36,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-31 03:30:51] 2025-05-31 03:30:36,523 | INFO     | current server update state: UPDATING_FINAL
[2025-05-31 03:30:51] 2025-05-31 03:30:36,523 | INFO     | update_server=False
[2025-05-31 03:30:51] 2025-05-31 03:30:36,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-31 03:30:51] 2025-05-31 03:30:36,523 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-31 03:30:51] 2025-05-31 03:30:36,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-31 03:30:51] 2025-05-31 03:30:36,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-31 03:30:51] 2025-05-31 03:30:36,524 | INFO     | found 0 job(s) in 20 queues
[2025-05-31 03:30:51] 2025-05-31 03:30:36,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-31 03:30:51] 2025-05-31 03:30:36,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-31 03:30:51] 2025-05-31 03:30:36,558 | INFO     | all payload control threads have been joined
[2025-05-31 03:30:51] 2025-05-31 03:30:36,866 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-31 03:30:51] 2025-05-31 03:30:36,866 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-31 03:30:51] 2025-05-31 03:30:36,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-31 03:30:51] 2025-05-31 03:30:36,866 | INFO     | will abort loop
[2025-05-31 03:30:51] 2025-05-31 03:30:37,383 | INFO     | all job control threads have been joined
[2025-05-31 03:30:51] 2025-05-31 03:30:37,527 | INFO     | [job] retrieve thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:37,528 | INFO     | [job] queue monitor thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:37,620 | INFO     | all data control threads have been joined
[2025-05-31 03:30:51] 2025-05-31 03:30:37,621 | INFO     | [payload] control thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:37,675 | INFO     | [payload] validate_post thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:37,675 | INFO     | [payload] failed_post thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:37,871 | INFO     | [job] job monitor thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:37,923 | INFO     | [job] create_data_payload thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,387 | INFO     | [job] control thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,423 | INFO     | [payload] execute_payloads thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,424 | INFO     | [data] copytool_in thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,424 | INFO     | [payload] validate_pre thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,424 | INFO     | [job] validate thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,527 | INFO     | [data] copytool_out thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:38,623 | INFO     | [data] control thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:39,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-31 03:30:51] 2025-05-31 03:30:43,423 | INFO     | [data] queue_monitor thread has finished
[2025-05-31 03:30:51] 2025-05-31 03:30:45,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249277986624)>', '<ExcThread(monitor, started 140248826750720)>']
[2025-05-31 03:30:51] 2025-05-31 03:30:45,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-31 03:30:51] 2025-05-31 03:30:45,651 | INFO     | [monitor] control thread has ended
[2025-05-31 03:30:51] 2025-05-31 03:30:50,071 | INFO     | all workflow threads have been joined
[2025-05-31 03:30:51] 2025-05-31 03:30:50,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-31 03:30:51] 2025-05-31 03:30:50,090 | INFO     | traces error code: 0
[2025-05-31 03:30:51] 2025-05-31 03:30:50,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-31 03:30:51] 2025-05-31 03:30:50,567 [wrapper] ==== pilot stdout END ====
[2025-05-31 03:30:51] 2025-05-31 03:30:50,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-31 03:30:51] 2025-05-31 03:30:50,576 [wrapper] pilotpid: 1313664
[2025-05-31 03:30:51] 2025-05-31 03:30:50,580 [wrapper] Pilot exit status: 0
[2025-05-31 03:30:51] 2025-05-31 03:30:50,611 [wrapper] pandaids: 6670811325
[2025-05-31 03:30:51] 2025-05-31 03:30:50,639 [wrapper] cleanup supervisor_pilot 1392195 1313665
[2025-05-31 03:30:51] 2025-05-31 03:30:50,642 [wrapper] Test setup, not cleaning
[2025-05-31 03:30:51] 2025-05-31 03:30:50,646 [wrapper] apfmon messages muted
[2025-05-31 03:30:51] 2025-05-31 03:30:50,649 [wrapper] ==== wrapper stdout END ====
[2025-05-31 03:30:51] 2025-05-31 03:30:50,653 [wrapper] ==== wrapper stderr END ====
[2025-05-31 03:30:51]  *** Error codes and diagnostics ***
[2025-05-31 03:30:51]     "exeErrorCode": 0,
[2025-05-31 03:30:51]     "exeErrorDiag": "",
[2025-05-31 03:30:51]     "pilotErrorCode": 0,
[2025-05-31 03:30:51]     "pilotErrorDiag": "",
[2025-05-31 03:30:51]  *** Listing of results directory ***
[2025-05-31 03:30:51] total 424084
[2025-05-31 03:30:51] -rw-r--r-- 1 boinc boinc    495897 May 29 10:07 pilot3.tar.gz
[2025-05-31 03:30:51] -rw-r--r-- 1 boinc boinc      5111 May 29 10:48 queuedata.json
[2025-05-31 03:30:51] -rwx------ 1 boinc boinc     37140 May 29 10:50 runpilot2-wrapper.sh
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc       100 May 31 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-31 03:30:51] -rwxr-xr-x 1 boinc boinc      7986 May 31 00:54 run_atlas
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc       105 May 31 00:54 job.xml
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc      9446 May 31 00:54 init_data.xml
[2025-05-31 03:30:51] -rw-r--r-- 2 boinc boinc 227244388 May 31 00:54 EVNT.44871834._001440.pool.root.1
[2025-05-31 03:30:51] drwxrwx--x 2 boinc boinc      4096 May 31 00:54 shared
[2025-05-31 03:30:51] -rw-r--r-- 2 boinc boinc    508879 May 31 00:54 input.tar.gz
[2025-05-31 03:30:51] -rw-r--r-- 2 boinc boinc     15093 May 31 00:54 start_atlas.sh
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc         0 May 31 00:54 boinc_lockfile
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc      2558 May 31 00:54 pandaJob.out
[2025-05-31 03:30:51] -rw------- 1 boinc boinc    987388 May 31 00:55 agis_schedconf.cvmfs.json
[2025-05-31 03:30:51] -rw------- 1 boinc boinc   1603667 May 31 00:55 agis_ddmendpoints.agis.ALL.json
[2025-05-31 03:30:51] drwx------ 4 boinc boinc      4096 May 31 00:55 pilot3
[2025-05-31 03:30:51] -rw------- 1 boinc boinc 200609658 May 31 03:27 HITS.44871837._098984.pool.root.1
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc       529 May 31 03:28 boinc_task_state.xml
[2025-05-31 03:30:51] -rw------- 1 boinc boinc      1044 May 31 03:30 memory_monitor_summary.json
[2025-05-31 03:30:51] -rw------- 1 boinc boinc    395661 May 31 03:30 log.44871837._098984.job.log.tgz.1
[2025-05-31 03:30:51] -rw------- 1 boinc boinc        95 May 31 03:30 pilot_heartbeat.json
[2025-05-31 03:30:51] -rw------- 1 boinc boinc      7706 May 31 03:30 heartbeat.json
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc      8192 May 31 03:30 boinc_mmap_file
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc        27 May 31 03:30 wrapper_checkpoint.txt
[2025-05-31 03:30:51] -rw------- 1 boinc boinc      4686 May 31 03:30 pilotlog.txt
[2025-05-31 03:30:51] -rw------- 1 boinc boinc    888380 May 31 03:30 log.44871837._098984.job.log.1
[2025-05-31 03:30:51] -rw------- 1 boinc boinc       357 May 31 03:30 output.list
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc       620 May 31 03:30 runtime_log
[2025-05-31 03:30:51] -rw------- 1 boinc boinc   1300480 May 31 03:30 result.tar.gz
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc      8973 May 31 03:30 runtime_log.err
[2025-05-31 03:30:51] -rw------- 1 boinc boinc       661 May 31 03:30 SghLDm30pe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzLeKDm57wuWo.diag
[2025-05-31 03:30:51] -rw-rw-r-- 1 boinc boinc     20603 May 31 03:30 stderr.txt
[2025-05-31 03:30:51] HITS file was successfully produced:
[2025-05-31 03:30:51] -rw------- 1 boinc boinc 200609658 May 31 03:27 shared/HITS.pool.root.1
[2025-05-31 03:30:51]  *** Contents of shared directory: ***
[2025-05-31 03:30:51] total 419624
[2025-05-31 03:30:51] -rw-r--r-- 2 boinc boinc 227244388 May 31 00:54 ATLAS.root_0
[2025-05-31 03:30:51] -rw-r--r-- 2 boinc boinc    508879 May 31 00:54 input.tar.gz
[2025-05-31 03:30:51] -rw-r--r-- 2 boinc boinc     15093 May 31 00:54 start_atlas.sh
[2025-05-31 03:30:51] -rw------- 1 boinc boinc 200609658 May 31 03:27 HITS.pool.root.1
[2025-05-31 03:30:51] -rw------- 1 boinc boinc   1300480 May 31 03:30 result.tar.gz
03:30:53 (1309986): run_atlas exited; CPU time 48035.872001
03:30:53 (1309986): called boinc_finish(0)

</stderr_txt>
]]>

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